EY675260

Overview
NameEY675260
Unique NameEY675260
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length990
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.626e-17
Identity = 60/189 (31.75%), Postives = 85/189 (44.97%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H     T++EY V   + V+++D S  L     + CGF+TGYGAA   AKV+                     +  GA++IIGID N  K  K +  G T+ +NP D   K I+E++  +T G GV+Y FE  G    ++ AL +                         L   GRT KG+ FGG K+K
Sbjct:  139 HFVRTGTFTEYTVAPEDSVVKIDASAPLEKVCLIGCGFSTGYGAAINSAKVQPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINKEKFPKAKELGATECVNPLDY-KKPINEVLFDMTDGEGVEYSFEVIGRTDTMTAALASCHNNYGTSVIVGVPPSASQIAFDPLLLFTGRTWKGSVFGGWKSK 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1B_PANTR (Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH1B PE=2 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 1.626e-17
Identity = 66/196 (33.67%), Postives = 90/196 (45.92%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG-----VPSLL--SEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H    ST+S+Y V+D N V ++D +  L     + CGF+TGYG+A   AKV                      +  GAA+II +D N  K  K +  G T+ INP D   K I E++K +T G GVD+ FE  G     + SLL   EA  T+              + M+ L        GRT KG  +GG K+K
Sbjct:  140 HFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLT-------GRTWKGAVYGGFKSK 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1B_HUMAN (Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.626e-17
Identity = 66/196 (33.67%), Postives = 90/196 (45.92%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG-----VPSLL--SEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H    ST+S+Y V+D N V ++D +  L     + CGF+TGYG+A   AKV                      +  GAA+II +D N  K  K +  G T+ INP D   K I E++K +T G GVD+ FE  G     + SLL   EA  T+              + M+ L        GRT KG  +GG K+K
Sbjct:  140 HFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLT-------GRTWKGAVYGGFKSK 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: FRMA_SHISS (S-(hydroxymethyl)glutathione dehydrogenase OS=Shigella sonnei (strain Ss046) GN=frmA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.124e-17
Identity = 59/193 (30.57%), Postives = 87/193 (45.08%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K +    FG TD INP+D  +K I +++  I +  G+D+ FEC G  +++  ALE+                    +  P  ++     GR  KG+ FGG+K +
Sbjct:  134 HYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDY-DKPIKDVLLDI-NKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVT----GRVWKGSAFGGVKGR 320          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: FRMA_PASPI (S-(hydroxymethyl)glutathione dehydrogenase OS=Pasteurella piscicida GN=frmA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.124e-17
Identity = 59/193 (30.57%), Postives = 87/193 (45.08%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H   CST+SEY V+    + +++P  +      L CG TTG GA    AKV++                    R   A +I  ID NP K E  + FG TD INP+D  +K + +++  +T   GVD+ FEC G  +++  ALE+                    +  P  ++     GR  KGT FGG+K +
Sbjct:  134 HYMGCSTFSEYTVVAEVSLAKINPQANAEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGGIGLAVVQGARQAKAGRIFAIDTNPSKFELAKQFGATDCINPNDY-DKPVQQVLVEMTK-WGVDHTFECIGNVNVMRSALESAHRGWGQSVIIGVAGAGKEISTRPFQLVT----GRVWKGTAFGGVKGR 320          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: FRMA_ECOSM (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.124e-17
Identity = 59/193 (30.57%), Postives = 87/193 (45.08%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K +    FG TD INP+D  +K I +++  I +  G+D+ FEC G  +++  ALE+                    +  P  ++     GR  KG+ FGG+K +
Sbjct:  134 HYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPDDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDY-DKPIKDVLLDI-NKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVT----GRVWKGSAFGGVKGR 320          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: FRMA_ECOLC (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=frmA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.124e-17
Identity = 59/193 (30.57%), Postives = 87/193 (45.08%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K +    FG TD INP+D  +K I +++  I +  G+D+ FEC G  +++  ALE+                    +  P  ++     GR  KG+ FGG+K +
Sbjct:  134 HYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDY-DKPIKDVLLDI-NKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVT----GRVWKGSAFGGVKGR 320          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: FRMA_ECOHS (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=frmA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.124e-17
Identity = 59/193 (30.57%), Postives = 87/193 (45.08%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K +    FG TD INP+D  +K I +++  I +  G+D+ FEC G  +++  ALE+                    +  P  ++     GR  KG+ FGG+K +
Sbjct:  134 HYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDY-DKPIKDVLLDI-NKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVT----GRVWKGSAFGGVKGR 320          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: FRMA_ECO57 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O157:H7 GN=frmA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.124e-17
Identity = 59/193 (30.57%), Postives = 87/193 (45.08%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K +    FG TD INP+D  +K I +++  I +  G+D+ FEC G  +++  ALE+                    +  P  ++     GR  KG+ FGG+K +
Sbjct:  134 HYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDY-DKPIKDVLLDI-NKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVT----GRVWKGSAFGGVKGR 320          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: FRMA_ECO24 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.124e-17
Identity = 59/193 (30.57%), Postives = 87/193 (45.08%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K +    FG TD INP+D  +K I +++  I +  G+D+ FEC G  +++  ALE+                    +  P  ++     GR  KG+ FGG+K +
Sbjct:  134 HYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDY-DKPIKDVLLDI-NKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVT----GRVWKGSAFGGVKGR 320          
The following BLAST results are available for this feature:
BLAST of EY675260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
ADH1B_UROHA1.626e-1731.75Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]
ADH1B_PANTR1.626e-1733.67Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH... [more]
ADH1B_HUMAN1.626e-1733.67Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B ... [more]
FRMA_SHISS2.124e-1730.57S-(hydroxymethyl)glutathione dehydrogenase OS=Shig... [more]
FRMA_PASPI2.124e-1730.57S-(hydroxymethyl)glutathione dehydrogenase OS=Past... [more]
FRMA_ECOSM2.124e-1730.57S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOLC2.124e-1730.57S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOHS2.124e-1730.57S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECO572.124e-1730.57S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECO242.124e-1730.57S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-008-C09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675260 ID=EY675260; Name=EY675260; organism=Citrus sinensis; type=EST; length=990bp
CACATTTTTTCATGCTCCACTTGGTCTGAATATATGGTCATCGATGCCAA
TTATGTCCTCAGAGTTGATCCAAGCATAGACCTTTCGCATGCTAGCTTCC
TTTCATGTGGATTTACAACTGGTTATGGGGCGGCTTGGAAGGAAGCCAAA
GTTGAAAAAGGATCTAGTGTTGCTGTTTTAGGCCTTGGTACTGTTGGATT
AGGGGCTGTTGATGGAGCCAGGATGCAAGGGGCAGCTAAGATAATTGGGA
TAGACAAGAACCCATGGAAAAAAGAAAAGGGGGAAGCTTTTGGAATGACA
GATTTCATAAACCCTGATGATGAACCAAACAAGTCAATTTCAGAATTGGT
CAAGGGGATAACTCATGGAATGGGTGTGGATTATTGCTTCGAGTGCACTG
GGGTTCCATCTTTACTTTCTGAAGCACTTGAAACCACAAAAGTGGGAAAA
GGAAAAGTGATAGTAATTGGGGTGGGAGTTGATACCATGGTGCCACTGAA
CGTAATCGCTCTTGCATGTGGTGGTCGGACTTTGAAAGGGACCACTTTTG
GTGGGATCAAAAACAAAATCCGAACTTCCCAATACTGCTTGACAAATGCA
AGAACAAGGAAATTAAAACTCCATCAACTCCTTGACCCATCATGTTAAAT
TTGAAAGAAATCGAAAAGGGAATTTCAGCTGGTTGAACAAACCGGGATTG
GGGCAAGGGCCCCGAATCCCAATTTGATTTGGTTTTTATCCTAAGGCCCC
CCCTTGGGGTTAAAATTTCCGGGATCAAAAACCCTAAAAAAAAATCGGCC
CTCTTGAAAAATCCCCCTTCCTTATTTTTGTGTTTTCCCCCCCCCCAAAA
TTCCCCCCCCCCCCCCAAAACACCCTCTAAAAATTTTGTTAAAAAAAAAA
AAAAAAAAAAAAAAAAAGGAAAAATTTTTTTTTTTGGGCAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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