EY675260

Overview
NameEY675260
Unique NameEY675260
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length990
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH7_MOUSE (Alcohol dehydrogenase class 4 mu/sigma chain OS=Mus musculus GN=Adh7 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.124e-17
Identity = 68/211 (32.23%), Postives = 96/211 (45.50%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKNKIRTSQYCLTNARTRKLKLHQLL 633
            H  + ST++EY V+D + V +VD +     A  + CGF+TGYGAA K AKV                      +  GA++IIGID N  K +K  A G T+ I+P D   K ISE++  +T G  V Y FE  G    + +AL +                  +      L   GRT KG  FGG K++    +  +T    +K  L QL+
Sbjct:  139 HFMNTSTFTEYTVLDESSVAKVDGAAPPEKACLIGCGFSTGYGAAVKTAKVTPGSTCVVFGLGGVGLSVIMGCKAAGASRIIGIDINKDKFQKALAVGATECISPKDS-TKPISEVLSDMT-GNTVQYTFEVIGRLETMVDALSSCHMNYGTSVVVGAPPSAKMLTYDPMLLFTGRTWKGCVFGGWKSRDDVPK-LVTEFLEKKFDLDQLI 346          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADHL_GADMO (Alcohol dehydrogenase class-3 chain L OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.774e-17
Identity = 65/198 (32.83%), Postives = 86/198 (43.43%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALA----------CGGRTLKGTTFGGIKN 564
            H    ST+SEY V+    + +V     L     L C  +TGYGAA   AKVE                     +  GA++II ID NP K    + FG TD +NP D  +K + +++  +T G GVDY FEC G  +++  ALE                 T V + V A              GRT KGT FGG K+
Sbjct:  140 HFMGSSTFSEYTVVAEISLAKVHEKAPLDKVCLLGCAISTGYGAALNTAKVEAGSTCAVFGLGALGLAVIMGCQAAGASRIIAIDVNPDKFRIAKEFGATDLVNPKDH-SKPVEQVLVEMTDG-GVDYSFECVGNIAVMRAALEA----------CHKGWGTSVIIGVAAAGQEISTRPFQLVTGRTWKGTAFGGYKS 325          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1_RABIT (Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.774e-17
Identity = 61/189 (32.28%), Postives = 85/189 (44.97%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H    ST+S+Y V+D   V ++D +  L     + CGF+TGYG+A K AKV                      +  GA++II +D N  K  K +  G T+ INP D   K I E+++ I+ G GVD+ FE  G    +  AL +               D+        L   GRT KG  FGG K+K
Sbjct:  140 HFIGTSTFSQYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFPKAKEVGATECINPQDY-KKPIQEVIQEISDG-GVDFSFEVIGRLDTVVAALLSCHGACGTSVIVGVPPDSQSLTVNPMLLLSGRTWKGAIFGGFKSK 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: FRMA_SYNY3 (S-(hydroxymethyl)glutathione dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=frmA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.623e-17
Identity = 60/193 (31.09%), Postives = 84/193 (43.52%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K E  +  G TD INP D  ++ I +++  +T G GVD+ FEC G   ++  ALE                     +  P  ++     GR   GT FGG+K +
Sbjct:  134 HYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGGIGLAVVQGARQAKAGRIIAIDTNPAKFELAKQMGATDCINPKDH-DQPIQQVIVEMT-GWGVDHSFECIGNVEVMRSALECAHRGWGQSVIIGVAGAGQEISTRPFQLVT----GRKWMGTAFGGVKGR 320          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: FRMA_HAEIN (S-(hydroxymethyl)glutathione dehydrogenase OS=Haemophilus influenzae GN=frmA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.623e-17
Identity = 59/198 (29.80%), Postives = 90/198 (45.45%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNKIRTSQ 582
            H   CST+SEY V+    + +++P  +      L CG TTG GA    AKV++                    R   A +II ID NP K E  + FG TD +NP+D  +K I +++  I +  G+D+ FEC G  +++ +ALE+                    +  P  ++     GR  KG+ FGG+K +    Q
Sbjct:  143 HYMGCSTFSEYSVVAEVSLAKINPEANHEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPAKFELAKQFGATDCLNPNDY-DKPIKDVLLDI-NKWGIDHTFECIGNVNVMRQALESAHRGWGQSIIIGVAGAGQEISTRPFQLVT----GRVWKGSAFGGVKGRSELPQ 334          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: FRMA_ECOLI (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain K12) GN=frmA PE=1 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 3.623e-17
Identity = 59/193 (30.57%), Postives = 87/193 (45.08%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K +    FG TD INP+D  +K I +++  I +  G+D+ FEC G  +++  ALE+                    +  P  ++     GR  KG+ FGG+K +
Sbjct:  134 HYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDY-DKPIKDVLLDI-NKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAVAGQEISTRPFQLVT----GRVWKGSAFGGVKGR 320          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH_MALDO (Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.623e-17
Identity = 59/193 (30.57%), Postives = 87/193 (45.08%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMV----PLNVIALACGGRTLKGTTFGGIKNK 567
            H    ST+SEY V+    + +++PS  L     LSCG +TG GA    AK +K                    R+ GA++IIG+D +  + E+ + FG+T+F+NP     K + E++  +T+  GVD   ECTG    +  A E                   V    P+N +      RTLKGT FG  K +
Sbjct:  143 HFVGTSTFSEYTVVHVGCLAKINPSAPLDKVCLLSCGISTGLGATLNVAKPKKGSTVAVFGLGAVGLAAAEGARLSGASRIIGVDLHSDRFEEAKKFGVTEFVNPKAH-EKPVQEVIAELTN-RGVDRSIECTGSTEAMISAFECVHDGWGVAVLVGVPHKDAVFKTHPVNFL----NERTLKGTFFGNYKTR 329          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1B_PAPHA (Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH1B PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.623e-17
Identity = 61/190 (32.11%), Postives = 88/190 (46.32%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTM-VPLNVIALACGGRTLKGTTFGGIKNK 567
            H    ST+S+Y V+D N V ++D +  L     + CGF+TGYG+A   AKV                      +  GAA+II +D N  K  K +  G T+ INP D   K I E++K +T G GVD+ FE  G    +  +L                 D+  + +N + L   GRT KG  +GG K++
Sbjct:  140 HFVGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSVCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSINPMLLLT-GRTWKGAVYGGFKSR 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1A_HUMAN (Alcohol dehydrogenase 1A OS=Homo sapiens GN=ADH1A PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.623e-17
Identity = 62/190 (32.63%), Postives = 87/190 (45.79%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTM-VPLNVIALACGGRTLKGTTFGGIKNK 567
            H    ST+S+Y V+D N V ++D +  L     + CGF+TGYG+A   AKV                      +  GAA+II +D N  K  K +  G T+ INP D   K I E++K +T G GVD+ FE  G    +  +L                 D+  + +N + L   GRT KG   GG K+K
Sbjct:  140 HFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSMNPMLLLT-GRTWKGAILGGFKSK 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: FADH_CANMA (S-(hydroxymethyl)glutathione dehydrogenase OS=Candida maltosa GN=FDH1 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.731e-17
Identity = 67/222 (30.18%), Postives = 98/222 (44.14%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEP-NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALA----------CGGRTLKGTTFGGIKNKIRTSQYCLTNARTRKLKLHQLL 633
            H   CST+S+Y V+    V+ ++P  +   A  L CG TTGYGAA   A V+K                      +GAA+II +D +  K+E G+  G T F+NP   P   +I + +  +T G G D+ F+CTG   ++  ALE                 T V + V A              GRT KG  FGG+K + +     + N    KLK+ + +
Sbjct:  143 HFMGCSTFSQYTVVADISVVAINPKAEFDKACLLGCGITTGYGAATITANVQKGDNVAVFGGGIVGLSVIQGCAERGAAQIILVDISDKKEEWGQKLGATAFVNPTKLPEGTTIVDKLIEMTDG-GCDFTFDCTGNVGVMRNALEA----------CHKGWGTSVIIGVAAAGKEISTRPFQLVTGRTWKGAAFGGVKGRSQLPG-IVNNYLDGKLKVEEFI 352          
The following BLAST results are available for this feature:
BLAST of EY675260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
ADH7_MOUSE2.124e-1732.23Alcohol dehydrogenase class 4 mu/sigma chain OS=Mu... [more]
ADHL_GADMO2.774e-1732.83Alcohol dehydrogenase class-3 chain L OS=Gadus mor... [more]
ADH1_RABIT2.774e-1732.28Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus G... [more]
FRMA_SYNY33.623e-1731.09S-(hydroxymethyl)glutathione dehydrogenase OS=Syne... [more]
FRMA_HAEIN3.623e-1729.80S-(hydroxymethyl)glutathione dehydrogenase OS=Haem... [more]
FRMA_ECOLI3.623e-1730.57S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
ADH_MALDO3.623e-1730.57Alcohol dehydrogenase OS=Malus domestica GN=ADH PE... [more]
ADH1B_PAPHA3.623e-1732.11Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH... [more]
ADH1A_HUMAN3.623e-1732.63Alcohol dehydrogenase 1A OS=Homo sapiens GN=ADH1A ... [more]
FADH_CANMA4.731e-1730.18S-(hydroxymethyl)glutathione dehydrogenase OS=Cand... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-008-C09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675260 ID=EY675260; Name=EY675260; organism=Citrus sinensis; type=EST; length=990bp
CACATTTTTTCATGCTCCACTTGGTCTGAATATATGGTCATCGATGCCAA
TTATGTCCTCAGAGTTGATCCAAGCATAGACCTTTCGCATGCTAGCTTCC
TTTCATGTGGATTTACAACTGGTTATGGGGCGGCTTGGAAGGAAGCCAAA
GTTGAAAAAGGATCTAGTGTTGCTGTTTTAGGCCTTGGTACTGTTGGATT
AGGGGCTGTTGATGGAGCCAGGATGCAAGGGGCAGCTAAGATAATTGGGA
TAGACAAGAACCCATGGAAAAAAGAAAAGGGGGAAGCTTTTGGAATGACA
GATTTCATAAACCCTGATGATGAACCAAACAAGTCAATTTCAGAATTGGT
CAAGGGGATAACTCATGGAATGGGTGTGGATTATTGCTTCGAGTGCACTG
GGGTTCCATCTTTACTTTCTGAAGCACTTGAAACCACAAAAGTGGGAAAA
GGAAAAGTGATAGTAATTGGGGTGGGAGTTGATACCATGGTGCCACTGAA
CGTAATCGCTCTTGCATGTGGTGGTCGGACTTTGAAAGGGACCACTTTTG
GTGGGATCAAAAACAAAATCCGAACTTCCCAATACTGCTTGACAAATGCA
AGAACAAGGAAATTAAAACTCCATCAACTCCTTGACCCATCATGTTAAAT
TTGAAAGAAATCGAAAAGGGAATTTCAGCTGGTTGAACAAACCGGGATTG
GGGCAAGGGCCCCGAATCCCAATTTGATTTGGTTTTTATCCTAAGGCCCC
CCCTTGGGGTTAAAATTTCCGGGATCAAAAACCCTAAAAAAAAATCGGCC
CTCTTGAAAAATCCCCCTTCCTTATTTTTGTGTTTTCCCCCCCCCCAAAA
TTCCCCCCCCCCCCCCAAAACACCCTCTAAAAATTTTGTTAAAAAAAAAA
AAAAAAAAAAAAAAAAAGGAAAAATTTTTTTTTTTGGGCAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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