EY675260

Overview
NameEY675260
Unique NameEY675260
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length990
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1_HORVU (Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.731e-17
Identity = 60/191 (31.41%), Postives = 86/191 (45.03%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMV----PLNVIALACGGRTLKGTTFGGIK 561
            H    ST+SEY V+    V +++P   L     LSCG +TG GA+   AK  K                    R+ GA++IIG+D N  + E+   FG T+F+NP D   K + +++  +T+G GVD   ECTG  + + +A E                        P+N +      RTLKGT FG  K
Sbjct:  142 HFVGTSTFSEYTVMHVGCVAKINPEAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNAVRFEEARKFGCTEFVNPKDH-TKPVQQVLADMTNG-GVDRSVECTGNVNAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFL----NERTLKGTFFGNFK 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADHQ_RABIT (Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctolagus cuniculus GN=ADH2-2 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 6.179e-17
Identity = 55/186 (29.57%), Postives = 90/186 (48.39%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE-TTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGG 555
            H    S +S+Y V+    + ++D   +L     + CGF+TGYGAA  +AKV                      +  GA++II +D N  K  K +A G TD +NP  E NK + +++  +T+G GVD+  +C G   ++   ++ TT              D  + ++ + L   GRTL+G++FGG
Sbjct:  145 HFLGISAFSQYTVVKDINLAKIDDDANLKRVCLIGCGFSTGYGAAINDAKVTPGSTCAVFGLGGVGLSAVIGCKTAGASRIIAVDINSDKFAKAKALGATDCLNP-RELNKPVQDVIVEMTNG-GVDFAIDCAGGSEVMKATVDCTTVGWGSCTFVGVNVNDKGLTISPVELIL-GRTLRGSSFGG 327          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADHI_RHOS4 (Alcohol dehydrogenase class-3 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=adhI PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 6.179e-17
Identity = 59/193 (30.57%), Postives = 78/193 (40.41%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGM----GVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H   CST+S Y V+    V +V P        ++ CG TTG GA    AKVE                     ++ GA  IIG+D N  KKE GE FGMT F+NP +     ++ LV           G DY F+CTG   ++ +ALE                              GR  KG+ FGG + +
Sbjct:  135 HYMGCSTFSNYTVLPEIAVAKVRPDAPFDKICYIGCGVTTGIGAVINTAKVEIGAKAVVFGLGGIGLNVIQGLKLAGADMIIGVDLNNAKKEWGERFGMTHFVNPSEIDGDVVAHLVNMTKTPFDQIGGADYTFDCTGNVKVMRQALEACHRGWGQSIVIGVAPAGAEIQTRPFQLVTGRVWKGSAFGGARGR 327          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH6_HUMAN (Alcohol dehydrogenase 6 OS=Homo sapiens GN=ADH6 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 6.179e-17
Identity = 62/190 (32.63%), Postives = 89/190 (46.84%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIA-LACGGRTLKGTTFGGIKNK 567
            H  + ST+ EY VI    V ++D    L     +SCGF+TG+GAA   AKV                      +  GAA+IIG+D N  K +K +  G T+ +NP D   K I E++  +T   G+D+CFE  G   +L+ AL  +                 V L +   L   GR+LKG+ FGG K++
Sbjct:  140 HFGNTSTFCEYTVIKEISVAKIDAVAPLEKVCLISCGFSTGFGAAINTAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIGVDVNKEKFKKAQELGATECLNPQD-LKKPIQEVLFDMTDA-GIDFCFEAIGNLDVLAAAL-ASCNESYGVCVVVGVLPASVQLKISGQLFFSGRSLKGSVFGGWKSR 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1_ARATH (Alcohol dehydrogenase class-P OS=Arabidopsis thaliana GN=ADH1 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 6.179e-17
Identity = 59/193 (30.57%), Postives = 88/193 (45.60%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMV----PLNVIALACGGRTLKGTTFGGIKNK 567
            H    ST+SEY V+ +  V +++P   L     +SCG +TG GA    AK +K                    R+ GA++IIG+D N  + ++ + FG+T+ +NP D  +K I +++  +T G GVD   ECTG    + +A E                        P+N +      RTLKGT FG  K K
Sbjct:  142 HFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSCGLSTGLGATLNVAKPKKGQSVAIFGLGAVGLGAAEGARIAGASRIIGVDFNSKRFDQAKEFGVTECVNPKDH-DKPIQQVIAEMTDG-GVDRSVECTGSVQAMIQAFECVHDGWGVAVLVGVPSKDDAFKTHPMNFL----NERTLKGTFFGNYKPK 328          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSJ (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 8.070e-17
Identity = 61/191 (31.94%), Postives = 87/191 (45.55%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMV----PLNVIALACGGRTLKGTTFGGIK 561
            H    ST+SEY V+    V +++P+  L     LSCG +TG GA    AK  K                    R+ GA++IIGID N  + E+   FG T+F+NP D  +K + +++  +T+G GVD   ECTG  + + +A E                        P+N +      RTLKGT FG  K
Sbjct:  142 HFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCTEFVNPKDH-DKPVQQVLAEMTNG-GVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFL----NERTLKGTFFGNYK 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSI (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.070e-17
Identity = 61/191 (31.94%), Postives = 87/191 (45.55%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMV----PLNVIALACGGRTLKGTTFGGIK 561
            H    ST+SEY V+    V +++P+  L     LSCG +TG GA    AK  K                    R+ GA++IIGID N  + E+   FG T+F+NP D  +K + +++  +T+G GVD   ECTG  + + +A E                        P+N +      RTLKGT FG  K
Sbjct:  142 HFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCTEFVNPKDH-DKPVQQVLAEMTNG-GVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFL----NERTLKGTFFGNYK 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH_FRAAN (Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 1.054e-16
Identity = 60/191 (31.41%), Postives = 84/191 (43.98%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMV----PLNVIALACGGRTLKGTTFGGIK 561
            H    ST+S Y V     + +++P   L     LSCG +TG GA     K +K                    RM GA++IIG+D N  + E+ + FG+T+F+NP D   K + E++  +T+G GVD   ECTG    +  A E                   V    P+N +      RTLKGT FG  K
Sbjct:  143 HFVGTSTFSVYTVTHVGCLAKINPQSPLDKVCILSCGISTGLGATLNVRKPKKGSTVAVFGLGAVGLAAAEGARMAGASRIIGVDLNSNRFEEAKKFGITEFVNPKDH-KKPVQEVIAELTNG-GVDRSIECTGNIQAMIPAFECVHDGWGVAVLVGVPHKDAVFTTHPMNFL----NERTLKGTFFGNYK 327          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1_MOUSE (Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 1.054e-16
Identity = 62/190 (32.63%), Postives = 91/190 (47.89%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTM-VPLNVIALACGGRTLKGTTFGGIKNK 567
            +  S ST+S+Y V+D   V ++D +  L     + CGF+TGYG+A K AKV                      +  GAA+II +D N  K  K +  G T+ INP D  +K I E+++ +T G GVD+ FE  G    ++ AL +               +   + +N + L   GRT KG  FGG K+K
Sbjct:  140 NFISTSTFSQYTVVDDIAVAKIDGASPLDKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVIIGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-SKPIQEVLQEMTDG-GVDFSFEVIGRLDTMTSALLSCHAACGVSVVVGVPPNAQNLSMNPMLLLL-GRTWKGAIFGGFKSK 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH7_RAT (Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus GN=Adh7 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.377e-16
Identity = 67/211 (31.75%), Postives = 94/211 (44.55%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKNKIRTSQYCLTNARTRKLKLHQLL 633
            H  + ST++EY V+D + V ++D       A  + CGF+TGYGAA K AKV                      +  GA++IIGID N  K +K    G T+ INP D   K ISE++  +T G  V Y FE  G    + +AL +                  +      L   GRT KG  FGG K++    +  +T    +K  L QL+
Sbjct:  139 HFMNTSTFTEYTVLDESSVAKIDAEAPPEKACLIGCGFSTGYGAAVKTAKVSPGSTCAVFGLGGVGLSVVMGCKAAGASRIIGIDINKDKFQKALDVGATECINPRDF-TKPISEVLSDMT-GNTVQYTFEVIGRLETMVDALSSCHMNYGTSVVVGAPPSAKMLSYDPMLLFTGRTWKGCVFGGWKSRDDVPK-LVTEFLEKKFDLGQLI 346          
The following BLAST results are available for this feature:
BLAST of EY675260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
ADH1_HORVU4.731e-1731.41Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1... [more]
ADHQ_RABIT6.179e-1729.57Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctol... [more]
ADHI_RHOS46.179e-1730.57Alcohol dehydrogenase class-3 OS=Rhodobacter sphae... [more]
ADH6_HUMAN6.179e-1732.63Alcohol dehydrogenase 6 OS=Homo sapiens GN=ADH6 PE... [more]
ADH1_ARATH6.179e-1730.57Alcohol dehydrogenase class-P OS=Arabidopsis thali... [more]
ADH1_ORYSJ8.070e-1731.94Alcohol dehydrogenase 1 OS=Oryza sativa subsp. jap... [more]
ADH1_ORYSI8.070e-1731.94Alcohol dehydrogenase 1 OS=Oryza sativa subsp. ind... [more]
ADH_FRAAN1.054e-1631.41Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH ... [more]
ADH1_MOUSE1.054e-1632.63Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE... [more]
ADH7_RAT1.377e-1631.75Alcohol dehydrogenase class 4 mu/sigma chain OS=Ra... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-008-C09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675260 ID=EY675260; Name=EY675260; organism=Citrus sinensis; type=EST; length=990bp
CACATTTTTTCATGCTCCACTTGGTCTGAATATATGGTCATCGATGCCAA
TTATGTCCTCAGAGTTGATCCAAGCATAGACCTTTCGCATGCTAGCTTCC
TTTCATGTGGATTTACAACTGGTTATGGGGCGGCTTGGAAGGAAGCCAAA
GTTGAAAAAGGATCTAGTGTTGCTGTTTTAGGCCTTGGTACTGTTGGATT
AGGGGCTGTTGATGGAGCCAGGATGCAAGGGGCAGCTAAGATAATTGGGA
TAGACAAGAACCCATGGAAAAAAGAAAAGGGGGAAGCTTTTGGAATGACA
GATTTCATAAACCCTGATGATGAACCAAACAAGTCAATTTCAGAATTGGT
CAAGGGGATAACTCATGGAATGGGTGTGGATTATTGCTTCGAGTGCACTG
GGGTTCCATCTTTACTTTCTGAAGCACTTGAAACCACAAAAGTGGGAAAA
GGAAAAGTGATAGTAATTGGGGTGGGAGTTGATACCATGGTGCCACTGAA
CGTAATCGCTCTTGCATGTGGTGGTCGGACTTTGAAAGGGACCACTTTTG
GTGGGATCAAAAACAAAATCCGAACTTCCCAATACTGCTTGACAAATGCA
AGAACAAGGAAATTAAAACTCCATCAACTCCTTGACCCATCATGTTAAAT
TTGAAAGAAATCGAAAAGGGAATTTCAGCTGGTTGAACAAACCGGGATTG
GGGCAAGGGCCCCGAATCCCAATTTGATTTGGTTTTTATCCTAAGGCCCC
CCCTTGGGGTTAAAATTTCCGGGATCAAAAACCCTAAAAAAAAATCGGCC
CTCTTGAAAAATCCCCCTTCCTTATTTTTGTGTTTTCCCCCCCCCCAAAA
TTCCCCCCCCCCCCCCAAAACACCCTCTAAAAATTTTGTTAAAAAAAAAA
AAAAAAAAAAAAAAAAAGGAAAAATTTTTTTTTTTGGGCAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
back to top