EY675260

Overview
NameEY675260
Unique NameEY675260
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length990
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1_COTJA (Alcohol dehydrogenase 1 OS=Coturnix coturnix japonica GN=ADH1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.377e-16
Identity = 60/189 (31.75%), Postives = 83/189 (43.92%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H    ST++EY V+      ++D +  L     + CGF+TGYGA  + AKVE                     +  GA++II ID N  K  K +  G T+ +NP D   K I E++  +T G GVDY FE  G    ++EAL +                         L   GRT KG+ FGG K+K
Sbjct:  140 HFIGTSTFTEYTVVHETAAAKIDSAAPLEKVCLIGCGFSTGYGAVLQTAKVEPGSTCAVFGLGGVGLSVVMGCKAAGASRIIAIDINKDKFAKAKELGATECVNPKDF-KKPIHEVLTEMT-GKGVDYSFEVIGRIETMTEALASCHYNYGVSVIVGVPPAAQKISFDPMLIFSGRTWKGSVFGGWKSK 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1_APTAU (Alcohol dehydrogenase 1 OS=Apteryx australis GN=ADH1 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.377e-16
Identity = 61/189 (32.28%), Postives = 84/189 (44.44%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H    ST++EY V+    V ++  +  L     + CGF+TGYGAA + AKVE                     +  GA++II ID N  K  K +  G TD +NP D   K I E++  +T G+GVDY FE  G    ++ AL +                         L   GRT KG+ FGG K+K
Sbjct:  140 HFIGTSTFTEYTVVHETAVAKIAAAAPLEKVCLIGCGFSTGYGAAVQTAKVEPGSTCAVFGLGGVGLSVVMGCKAAGASRIIAIDINKDKFAKAKELGATDCVNPKDF-TKPIHEVLMEMT-GLGVDYSFEVIGHTETMAAALASCHFNYGVSVILGVPPAAEKISFDPMLLFSGRTWKGSVFGGWKSK 326          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH6_PONAB (Alcohol dehydrogenase 6 OS=Pongo abelii GN=ADH6 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.348e-16
Identity = 65/212 (30.66%), Postives = 96/212 (45.28%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIA-LACGGRTLKGTTFGGIKNKIRTSQYCLTNARTRKLKLHQLL 633
            H  + ST+ EY VI    V ++D    L     +SCGF+TG+GAA   AKV                      +  GA +IIG+D N  K +K    G T+ +NP D   K I E++  +T   G+D+CFE  G   +L+ AL  +                 V L +   L   GR+LKG+ FGG K++    +  + +   +KL L  L+
Sbjct:  140 HFGNTSTFCEYTVIKEISVAKIDAVAPLEKVCLISCGFSTGFGAAINTAKVTPGSTCAVFGLGGVGSSVVMGCKAAGATRIIGVDVNKEKFKKARELGATECLNPQD-LKKPIQEVLFDMTDA-GIDFCFEAIGNLDVLAAAL-ASCNESYGVCVVVGLLPASVQLKISGQLFFSGRSLKGSVFGGWKSRQHIPK-LVADYMAKKLNLDPLI 347          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1_PERMA (Alcohol dehydrogenase 1 OS=Peromyscus maniculatus GN=ADH1 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 2.348e-16
Identity = 65/212 (30.66%), Postives = 100/212 (47.17%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG-VPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKNKIRTSQYCLTNARTRKLKLHQLL 633
            +  S ST+S+Y V+D   V ++D +  L     + CGF+TGYG+A K AKV                      +  GAA+II +D N  K  K +  G T+ INP D  +K I E+++ +T G GVD+ FE  G + ++ S  L                    + +N ++L   GR+ KG  FGG K+K    +  +T+   +K  L  L+
Sbjct:  140 NFISTSTFSQYTVVDEMAVAKIDGASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVIIGCKAAGAARIIAVDINKDKFAKAKELGATECINPLDY-SKPIQEVLQEMTDG-GVDFSFEVIGRLDTMTSSLLSCHASCGVSVIVGVPPNAQSLSVNPMSLLM-GRSWKGAIFGGFKSKDSVPK-LVTDFMAKKFPLEPLI 347          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: FADH_PARDE (S-(hydroxymethyl)glutathione dehydrogenase OS=Paracoccus denitrificans GN=flhA PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 4.005e-16
Identity = 64/201 (31.84%), Postives = 83/201 (41.29%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPN--KSISELVKGITHGM-GVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNKIRTSQ 582
            H   CST+S Y V+    V +V          ++ CG TTG GA    AKVE                     R+ GA  IIG+D N  KK   E FGMT FINP +  N  + I  L K     + G DY F+CTG   ++ +ALE T                   +  P  ++     GR  KGT FGG + +    Q
Sbjct:  135 HYMGCSTFSNYTVLPEIAVAKVREDAPFDKICYIGCGVTTGIGAVINTAKVEIGAKAVVFGLGGIGLNVLQGLRLAGADMIIGVDLNDDKKPMAEHFGMTHFINPKNCENVVQEIVNLTKTPFDQIGGADYSFDCTGNVKVMRDALECTHRGWGQSIIIGVAPAGAEISTRPFQLVT----GRVWKGTAFGGARGRTDVPQ 331          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1_CHICK (Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 6.832e-16
Identity = 59/189 (31.22%), Postives = 82/189 (43.39%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H    ST++EY V+      ++D +  L     + CGF+TGYGA  + AKVE                     +  GA++II +D N  K  K +  G T+ INP D   K I E++  +T G GVDY FE  G    ++ AL +                         L   GRT KG+ FGG K+K
Sbjct:  141 HFVGTSTFTEYTVVHETAAAKIDSAAPLEKVCLIGCGFSTGYGAVLQTAKVEAGSTCAVFGLGGVGLSVVMGCKAAGASRIIAVDINKDKFAKAKELGATECINPKDF-KKPIHEVLTEMT-GQGVDYSFEVIGRIETMTAALASCHNNYGVSVIVGVPPAAQKISFDPMLIFSGRTWKGSVFGGWKSK 327          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: FADH2_SCHPO (Putative S-(hydroxymethyl)glutathione dehydrogenase 2 OS=Schizosaccharomyces pombe GN=SPCC13B11.04c PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 8.923e-16
Identity = 59/193 (30.57%), Postives = 85/193 (44.04%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H   CST+SEY V+    V+ ++    L     L CG TTGYGAA   A +++                      + A +I GID NP KK    +FG TDFINP+D     I +++   T G G+D+ F+CTG   ++  ALE                     +  P  ++     GR  +G  FGG+K +
Sbjct:  144 HFMGCSTFSEYTVVADISVVAIERLAPLDSVCLLGCGITTGYGAATITADIKEGDSVAVFGLGSVGLAVIQGAVKKRAGRIFGIDVNPEKKNWAMSFGATDFINPND-LQSPIQDVLIHETDG-GLDWTFDCTGNVHVMRSALEACHKGWGQSIVIGVAAAGQEISTRPFQLVT----GRVWRGCAFGGVKGR 330          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: FADH_PICPA (S-(hydroxymethyl)glutathione dehydrogenase OS=Pichia pastoris GN=FLD1 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.988e-15
Identity = 60/194 (30.93%), Postives = 84/194 (43.30%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEP-NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H   CS++S+Y V+    V++V           L CG TTGYGAA   AK+ K                      +GA++II ID N  KK   + FG T F+NP   P   +I + +  IT G G DY F+CTG   ++  ALE+                    +  P  ++     GR  +G  FGGIK +
Sbjct:  141 HYMGCSSFSQYTVVADISVVKVQDEAPKDKTCLLGCGVTTGYGAAINTAKISKGDKIGVFGAGCIGLSVIQGAVSKGASEIIVIDINDSKKAWADQFGATKFVNPTTLPEGTNIVDYLIDITDG-GFDYTFDCTGNVQVMRNALESCHKGWGESIIIGVAAAGKEISTRPFQLVT----GRVWRGCAFGGIKGR 329          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADHX_DICDI (Alcohol dehydrogenase class-3 OS=Dictyostelium discoideum GN=adh5 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.988e-15
Identity = 64/195 (32.82%), Postives = 85/195 (43.59%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINP--DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H    ST+S+Y V+       V     L     L CG TTG+GAA   AKVE+                       GA +IIGID N  K   G+ FG T+FINP  D    K+I + +  IT G GVDY FEC G  +++  ALE                     +  P  ++     GR  KG+ FGG+K++
Sbjct:  141 HFMGTSTFSQYTVLPEISCCVVREDAPLDKVCLLGCGITTGFGAAKITAKVEEGSTVAIFGLGAVGLSVAQGAVDCGAKRIIGIDNNETKFGPGKDFGCTEFINPSKDLPEGKTIQQHLVDITDG-GVDYSFECIGNVNVMRAALECCHKGWGVSTIVGVAPAGAEISTRPFQLVT----GRVWKGSAFGGVKSR 330          
BLAST of EY675260 vs. ExPASy Swiss-Prot
Match: ADH1_GEOKN (Alcohol dehydrogenase 1 OS=Geomys knoxjonesi GN=ADH1 PE=2 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.988e-15
Identity = 59/193 (30.57%), Postives = 89/193 (46.11%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL----ETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKNK 567
            H    +T+SEY V+    V ++D +  L     + CGF+TGYG+A K  KV +                    +  GAA+II +D N  K  K +  G T+ +NP D  +K I ++++ +T G GVD+ FE  G    +  AL    E+                TM P+ +++    GR+ KG  FGG K K
Sbjct:  140 HFLGVTTFSEYTVVSEISVTKIDAASPLEKVCLIGCGFSTGYGSAVKVGKVARGSICSCVWSGRVGLSAIIGCKAAGAARIIAVDINKDKFAKAKELGATECVNPQDY-DKPIYQVLQEMTDG-GVDFSFEVIGRLDTMVSALMCCQESHGVSVIVGVPPNAQSLTMDPMVLLS----GRSWKGAVFGGYKGK 326          
The following BLAST results are available for this feature:
BLAST of EY675260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
ADH1_COTJA1.377e-1631.75Alcohol dehydrogenase 1 OS=Coturnix coturnix japon... [more]
ADH1_APTAU1.377e-1632.28Alcohol dehydrogenase 1 OS=Apteryx australis GN=AD... [more]
ADH6_PONAB2.348e-1630.66Alcohol dehydrogenase 6 OS=Pongo abelii GN=ADH6 PE... [more]
ADH1_PERMA2.348e-1630.66Alcohol dehydrogenase 1 OS=Peromyscus maniculatus ... [more]
FADH_PARDE4.005e-1631.84S-(hydroxymethyl)glutathione dehydrogenase OS=Para... [more]
ADH1_CHICK6.832e-1631.22Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 P... [more]
FADH2_SCHPO8.923e-1630.57Putative S-(hydroxymethyl)glutathione dehydrogenas... [more]
FADH_PICPA1.988e-1530.93S-(hydroxymethyl)glutathione dehydrogenase OS=Pich... [more]
ADHX_DICDI1.988e-1532.82Alcohol dehydrogenase class-3 OS=Dictyostelium dis... [more]
ADH1_GEOKN1.988e-1530.57Alcohol dehydrogenase 1 OS=Geomys knoxjonesi GN=AD... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-008-C09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675260 ID=EY675260; Name=EY675260; organism=Citrus sinensis; type=EST; length=990bp
CACATTTTTTCATGCTCCACTTGGTCTGAATATATGGTCATCGATGCCAA
TTATGTCCTCAGAGTTGATCCAAGCATAGACCTTTCGCATGCTAGCTTCC
TTTCATGTGGATTTACAACTGGTTATGGGGCGGCTTGGAAGGAAGCCAAA
GTTGAAAAAGGATCTAGTGTTGCTGTTTTAGGCCTTGGTACTGTTGGATT
AGGGGCTGTTGATGGAGCCAGGATGCAAGGGGCAGCTAAGATAATTGGGA
TAGACAAGAACCCATGGAAAAAAGAAAAGGGGGAAGCTTTTGGAATGACA
GATTTCATAAACCCTGATGATGAACCAAACAAGTCAATTTCAGAATTGGT
CAAGGGGATAACTCATGGAATGGGTGTGGATTATTGCTTCGAGTGCACTG
GGGTTCCATCTTTACTTTCTGAAGCACTTGAAACCACAAAAGTGGGAAAA
GGAAAAGTGATAGTAATTGGGGTGGGAGTTGATACCATGGTGCCACTGAA
CGTAATCGCTCTTGCATGTGGTGGTCGGACTTTGAAAGGGACCACTTTTG
GTGGGATCAAAAACAAAATCCGAACTTCCCAATACTGCTTGACAAATGCA
AGAACAAGGAAATTAAAACTCCATCAACTCCTTGACCCATCATGTTAAAT
TTGAAAGAAATCGAAAAGGGAATTTCAGCTGGTTGAACAAACCGGGATTG
GGGCAAGGGCCCCGAATCCCAATTTGATTTGGTTTTTATCCTAAGGCCCC
CCCTTGGGGTTAAAATTTCCGGGATCAAAAACCCTAAAAAAAAATCGGCC
CTCTTGAAAAATCCCCCTTCCTTATTTTTGTGTTTTCCCCCCCCCCAAAA
TTCCCCCCCCCCCCCCAAAACACCCTCTAAAAATTTTGTTAAAAAAAAAA
AAAAAAAAAAAAAAAAAGGAAAAATTTTTTTTTTTGGGCAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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