EY675259

Overview
NameEY675259
Unique NameEY675259
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length987
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8531 contig Csv1_Contig8531:1..987. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: ADHQ_RABIT (Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctolagus cuniculus GN=ADH2-2 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.606e-17
Identity = 59/202 (29.21%), Postives = 97/202 (48.02%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE-TTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKN 603
            H    S +S+Y V+    + ++D   +L     + CGF+TGYGAA  +AKV                      +  GA++II +D N  K  K +A G TD +NP  E NK + +++  +T+G GVD+  +C G   ++   ++ TT              D  + ++ + L   GRTL+G++FGG    + +P L+   KN
Sbjct:  145 HFLGISAFSQYTVVKDINLAKIDDDANLKRVCLIGCGFSTGYGAAINDAKVTPGSTCAVFGLGGVGLSAVIGCKTAGASRIIAVDINSDKFAKAKALGATDCLNP-RELNKPVQDVIVEMTNG-GVDFAIDCAGGSEVMKATVDCTTVGWGSCTFVGVNVNDKGLTISPVELIL-GRTLRGSSFGGWDVDT-VPKLVSDYKN 342          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: ADH1_CHICK (Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.606e-17
Identity = 64/208 (30.77%), Postives = 91/208 (43.75%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLP-ILLDKCKNKEI*TP 621
            H    ST++EY V+      ++D +  L     + CGF+TGYGA  + AKVE                     +  GA++II +D N  K  K +  G T+ INP D   K I E++  +T G GVDY FE  G    ++ AL +                         L   GRT KG+ FGG K+K  +P ++ D  K K +  P
Sbjct:  141 HFVGTSTFTEYTVVHETAAAKIDSAAPLEKVCLIGCGFSTGYGAVLQTAKVEAGSTCAVFGLGGVGLSVVMGCKAAGASRIIAVDINKDKFAKAKELGATECINPKDF-KKPIHEVLTEMT-GQGVDYSFEVIGRIETMTAALASCHNNYGVSVIVGVPPAAQKISFDPMLIFSGRTWKGSVFGGWKSKDAVPKLVADYMKKKFVLDP 346          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: ADH1_GEOKN (Alcohol dehydrogenase 1 OS=Geomys knoxjonesi GN=ADH1 PE=2 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 4.709e-17
Identity = 62/200 (31.00%), Postives = 94/200 (47.00%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL----ETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILL 588
            H    +T+SEY V+    V ++D +  L     + CGF+TGYG+A K  KV +                    +  GAA+II +D N  K  K +  G T+ +NP D  +K I ++++ +T G GVD+ FE  G    +  AL    E+                TM P+ +++    GR+ KG  FGG K K D+P L+
Sbjct:  140 HFLGVTTFSEYTVVSEISVTKIDAASPLEKVCLIGCGFSTGYGSAVKVGKVARGSICSCVWSGRVGLSAIIGCKAAGAARIIAVDINKDKFAKAKELGATECVNPQDY-DKPIYQVLQEMTDG-GVDFSFEVIGRLDTMVSALMCCQESHGVSVIVGVPPNAQSLTMDPMVLLS----GRSWKGAVFGGYKGKDDVPKLV 333          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: ADH1_GEOBU (Alcohol dehydrogenase 1 OS=Geomys bursarius GN=ADH1 PE=2 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 4.709e-17
Identity = 62/200 (31.00%), Postives = 94/200 (47.00%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL----ETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILL 588
            H    +T+SEY V+    V ++D +  L     + CGF+TGYG+A K  KV +                    +  GAA+II +D N  K  K +  G T+ +NP D  +K I ++++ +T G GVD+ FE  G    +  AL    E+                TM P+ +++    GR+ KG  FGG K K D+P L+
Sbjct:  140 HFLGVTTFSEYTVVSEISVTKIDATSPLEKVCLIGCGFSTGYGSAVKVGKVARGSICSCVWSGRVGLSAIIGCKAAGAARIIAVDINKDKFAKAKELGATECVNPQDY-DKPIYQVLQEMTDG-GVDFSFEVIGRLDTMVSALMCCQESHGVSVIVGVPPNAQSLTMDPMVLLS----GRSWKGAVFGGYKGKDDVPKLV 333          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: ADH6_PERMA (Alcohol dehydrogenase 6 OS=Peromyscus maniculatus GN=ADH6 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 6.150e-17
Identity = 67/207 (32.37%), Postives = 95/207 (45.89%), Query Frame = 1
Query:   19 TWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIA-LACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEI*TPSTLDP 636
            T+SEY+VI    V +VD    L  A  + CGF TG+GAA   AKV                      +  GAA+II +D N  K  K +  G T+ I+P D   K I +++  + +  G D+ FE TG P  +  AL  +               + + LN+ + L   GRTLKG+  GG KTK ++P L+     K+      LDP
Sbjct:  146 TFSEYIVIKEISVAKVDEDALLEKACIIGCGFATGFGAAINSAKVSPGSTCAVFGLGGVGLSVIMGCKAAGAARIIAVDTNKDKFAKAKTVGATECIDPQDF-EKPIQQVLFDMMND-GADFTFEVTGNPETVETAL-ASCHKDHGVCVIVGSLASWIQLNINSHLFFSGRTLKGSVLGGWKTKEEIPKLVSDYTAKKF----NLDP 345          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: FADH1_SCHPO (Probable S-(hydroxymethyl)glutathione dehydrogenase 1 OS=Schizosaccharomyces pombe GN=SPBC1539.07c PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 8.032e-17
Identity = 64/211 (30.33%), Postives = 93/211 (44.08%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLK-------------GTTFGGIKTKSDLPILLDK 594
            H   CS++S+Y V+    ++ +  S  L     L CG TTG+GA    AKVE                        GA++II ID N  K+   + FG TDFI  D    K + + V  +T G GVDY F+CTG  +++ + L+                     L VI +A  G+TL              G+ FGG+K +S+LP  +D+
Sbjct:  141 HYMGCSSFSQYTVVADISLVAISHSAPLRSICLLGCGVTTGFGAVTHSAKVESGSTVAVVGCGCVGLAAMQGAVAAGASRIIAIDINADKEVYAKKFGATDFI--DSSKVKDLVQYVIDVTDG-GVDYAFDCTGNVTVMQQELQFCHKGWG-------------KLCVIGVAAAGKTLDFRPFLVVTGRQVLGSAFGGVKGRSELPNFVDE 335          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: FADH_PICPA (S-(hydroxymethyl)glutathione dehydrogenase OS=Pichia pastoris GN=FLD1 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.049e-16
Identity = 62/201 (30.85%), Postives = 89/201 (44.28%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEP-NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILL 588
            H   CS++S+Y V+    V++V           L CG TTGYGAA   AK+ K                      +GA++II ID N  KK   + FG T F+NP   P   +I + +  IT G G DY F+CTG   ++  ALE+                    +  P  ++     GR  +G  FGGIK ++ +P L+
Sbjct:  141 HYMGCSSFSQYTVVADISVVKVQDEAPKDKTCLLGCGVTTGYGAAINTAKISKGDKIGVFGAGCIGLSVIQGAVSKGASEIIVIDINDSKKAWADQFGATKFVNPTTLPEGTNIVDYLIDITDG-GFDYTFDCTGNVQVMRNALESCHKGWGESIIIGVAAAGKEISTRPFQLVT----GRVWRGCAFGGIKGRTQMPSLV 336          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: ADH6_RAT (Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Adh6 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.337e-16
Identity = 60/191 (31.41%), Postives = 86/191 (45.03%), Query Frame = 1
Query:   19 TWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIA-LACGGRTLKGTTFGGIKTKSDLPILL 588
            ++SEY V+    V ++D    L     + CGF TGYGAA   AKV                      +  GAA+II +D N  +  K +  G TD ++P D   K I E++  +  G GVD+CFE TG    +  AL +                    L++ + L   GR LKG+  GG KTK ++P L+
Sbjct:  146 SFSEYTVLKEISVAKIDEGAPLEKVCIIGCGFATGYGAAINSAKVTPGSTCAVFGLGGVGLSVIIGCKAAGAARIIAVDINKDRFAKAKTVGATDCVDPRDF-EKPIEEVLSDMIDG-GVDFCFEVTGNTEAVGAALGSCHKDHGVCVTVGALASFTSTLSIRSHLFFSGRILKGSILGGWKTKEEIPKLV 334          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: ADH1_GEOAT (Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH1 PE=2 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 3.986e-16
Identity = 59/196 (30.10%), Postives = 86/196 (43.88%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILL 588
            H    +T+SEY V+    V ++D +  L     + CGF+TGYG+A K  KV +                    +  GAA+II +D N  K  K +  G T+ +NP D  +K I E+++ +T G GVD+ FE  G       AL                 +         +   GR+ KG  FGG K K D+P L+
Sbjct:  140 HFLGVTTFSEYTVVSEISVTKIDAASPLEKVCLIGCGFSTGYGSAVKVGKVARGSICACVWSGRVGLSAIIGCKAAGAARIIAVDINKDKFAKAKELGATECVNPQDY-DKPIYEVLQEMTDG-GVDFSFEVIGRLDTKVSALMCCQESHGVSVIVGVPPNAQSLTIDPKVLLSGRSWKGAVFGGYKGKDDVPKLV 333          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: ADH8_RANPE (NADP-dependent alcohol dehydrogenase OS=Rana perezi GN=ADH8 PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 1.515e-15
Identity = 63/203 (31.03%), Postives = 95/203 (46.80%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT-XXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNK 606
            ++   ST++EY V+    V ++DP   L  +  + CGF TGYGAA   AKV                      +  GA++IIG+  +  K  K    G T+ +NP D  +K I E++   T+G GVDY  EC G    +  AL++T               +  +PL+ + L   GR+LKG+ FGG K +    ++ D  K K
Sbjct:  140 NLVGTSTFTEYTVVADIAVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDY-DKPIYEVICEKTNG-GVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLT-GRSLKGSVFGGFKGEEVSRLVDDYMKKK 338          
The following BLAST results are available for this feature:
BLAST of EY675259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
ADHQ_RABIT3.606e-1729.21Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctol... [more]
ADH1_CHICK3.606e-1730.77Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 P... [more]
ADH1_GEOKN4.709e-1731.00Alcohol dehydrogenase 1 OS=Geomys knoxjonesi GN=AD... [more]
ADH1_GEOBU4.709e-1731.00Alcohol dehydrogenase 1 OS=Geomys bursarius GN=ADH... [more]
ADH6_PERMA6.150e-1732.37Alcohol dehydrogenase 6 OS=Peromyscus maniculatus ... [more]
FADH1_SCHPO8.032e-1730.33Probable S-(hydroxymethyl)glutathione dehydrogenas... [more]
FADH_PICPA1.049e-1630.85S-(hydroxymethyl)glutathione dehydrogenase OS=Pich... [more]
ADH6_RAT2.337e-1631.41Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Ad... [more]
ADH1_GEOAT3.986e-1630.10Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH... [more]
ADH8_RANPE1.515e-1531.03NADP-dependent alcohol dehydrogenase OS=Rana perez... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-008-C08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675259 ID=EY675259; Name=EY675259; organism=Citrus sinensis; type=EST; length=987bp
CACATTTTTTCATGCTCCACTTGGTCTGAATATATGGTCATCGATGCCAA
TTATGTACTCAGAGTTGATCCAAGCATAGACCTTTCGCATGCTAGCTTCC
TTTCATGTGGATTTACAACTGGTTATGGGGCGGCTTGGAAGGAAGCCAAA
GTTGAAAAAGGATCTAGTGTTGCTGTTTTAGGCCTTGGTACTGTTGGATT
AGGGGCTGTTGATGGAGCCAGGATGCAAGGGGCAGCTAAGATAATTGGGA
TAGACAAGAACCCATGGAAAAAAGAAAAGGGGGAAGCTTTTGGAATGACA
GATTTCATAAACCCTGATGATGAACCAAACAAGTCAATTTCAGAATTGGT
CAAGGGGATAACTCATGGAATGGGTGTGGATTATTGCTTCGAGTGCACTG
GGGTTCCATCTTTACTTTCTGAAGCACTTGAAACCACAAAAGTGGGAAAA
GGAAAAGTGATAGTAATTGGGGTGGGAGTTGATACCATGGTGCCACTGAA
CGTAATCGCTCTTGCATGTGGTGGTCGGACTTTGAAAGGGACCACTTTTG
GTGGGATCAAAACAAAATCCGACCTTCCGATACTGCTTGACAAATGCAAG
AACAAGGAAATTTAAACTCCTTCAACTCTTGACCCATCATGTTAAAATTG
AAAAAAAATCACAAAGGCATTTCACCCGGTTGAAGAAACCGGATTGTGGT
AAGGGCCCGGATCCCAAATTGAATCGGGTTTTACCCAAGGCCCCCCCTTG
GGGAAAATTTCCGGAATAAAAAACTTAAAAAATCCGGCCCTTGGAAAACC
CCTTTTCTTTTTTTTTTTTCCCCCCCCCAAACCCCCCCCCCCCCCAAACC
CCCTCAAATTTTTGTAAAAAAAAAAAAAAAAAAAGAGGGAATTTTTTTTT
CCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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