EY675259

Overview
NameEY675259
Unique NameEY675259
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length987
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8531 contig Csv1_Contig8531:1..987. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSI (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.943e-20
Identity = 66/208 (31.73%), Postives = 98/208 (47.12%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMV----PLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEI 612
            H    ST+SEY V+    V +++P+  L     LSCG +TG GA    AK  K                    R+ GA++IIGID N  + E+   FG T+F+NP D  +K + +++  +T+G GVD   ECTG  + + +A E                        P+N +      RTLKGT FG  K ++DLP +++    KE+
Sbjct:  142 HFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCTEFVNPKDH-DKPVQQVLAEMTNG-GVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFL----NERTLKGTFFGNYKPRTDLPNVVELYMKKEL 343          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: ADH1A_MACMU (Alcohol dehydrogenase 1A OS=Macaca mulatta GN=ADH1A PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 5.943e-20
Identity = 65/197 (32.99%), Postives = 94/197 (47.72%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTM-VPLNVIALACGGRTLKGTTFGGIKTKSDLPILL 588
            H    ST+S+Y V+D N V ++D +  +     + CGF+TGYG+A K AKV                      +  GAA+II +D N  K  K +  G T+ INP D   K I E++K +T G GVD+ FE  G    +  +L                 D+  + +N + L   GRT KG  +GG K+K D+P L+
Sbjct:  140 HFLGVSTFSQYTVVDENAVAKIDAASPMEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSINPMLLLT-GRTWKGAVYGGFKSKEDIPKLV 333          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: ADHX_UROHA (Alcohol dehydrogenase class-3 OS=Uromastyx hardwickii PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.014e-19
Identity = 68/204 (33.33%), Postives = 94/204 (46.08%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEI 612
            H    ST+SEY V+    + +++ S  L     L CG +TGYGAA   AKVE                     ++ GA++IIGID N  K  K + FG T+ I+P D   K I E++  +T G GVDY FEC G   ++  ALE                              GRT KGT FGG K+   +P L+D+  +K++
Sbjct:  138 HFMGTSTFSEYTVVADISLTKINASAPLDKVCLLGCGVSTGYGAALNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDLNKDKFAKAKEFGATECISPADF-KKPIQEVLIEMTDG-GVDYSFECIGNVGVMRAALEACHKGWGVSVIVGVAAAGQEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVDEYMSKKM 339          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: ADH1_ALLMI (Alcohol dehydrogenase 1 OS=Alligator mississippiensis PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.014e-19
Identity = 70/205 (34.15%), Postives = 95/205 (46.34%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE-TTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEI 612
            H    ST++EY V+    V R+D +  L     + CGF+TGYGAA K+AKVE                     +  GA++IIGID N  K  K +  G T+ INP D   K I E++  +T G GVDY FE  G    ++ AL                     +  N + L   GRT KG+ FGG K+K  +P L+     K+I
Sbjct:  139 HFIGTSTFTEYTVVHETAVARIDAAAPLEKVCLIGCGFSTGYGAAVKDAKVEPGSTCAVFGLGGVGLSTIMGCKAAGASRIIGIDINKDKFAKAKELGATECINPLD-CKKPIQEVLSEMTGG-GVDYSFEVIGRIDTMTAALACCQDNYGTSVIVGVPPASEKITFNPMMLFT-GRTWKGSVFGGWKSKESVPKLVADYMEKKI 340          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: ADH7_HUMAN (Alcohol dehydrogenase class 4 mu/sigma chain OS=Homo sapiens GN=ADH7 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.289e-19
Identity = 64/196 (32.65%), Postives = 92/196 (46.94%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILL 588
            H  + ST++EY V+D + V ++D +        + CGF+TGYGAA K  KV+                     +  GA++IIGID N  K EK  A G T+ I+P D   K ISE++  +T G  V Y FE  G    + +AL +                  +      L   GRT KG  FGG+K++ D+P L+
Sbjct:  139 HFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDS-TKPISEVLSEMT-GNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLV 332          

HSP 2 Score: 21.557 bits (44), Expect = 1.289e-19
Identity = 10/26 (38.46%), Postives = 16/26 (61.54%), Query Frame = 2
Query:  587 LTNARTRKFKLLQLLTHHVKIEKKSQ 664
            +T    +KF L QL+TH +  +K S+
Sbjct:  332 VTEFLAKKFDLDQLITHVLPFKKISE 357          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: FRMA_ECOUT (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.324e-19
Identity = 64/208 (30.77%), Postives = 95/208 (45.67%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEI 612
            H   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K E    FG TD INP+D  +K I +++  I +  G+D+ FEC G  +++  ALE+                    +  P  ++     GR  KG+ FGG+K +S LP +++     +I
Sbjct:  134 HYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFELARRFGATDCINPNDY-DKPIKDVLLDI-NKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVT----GRVWKGSAFGGVKGRSQLPGMVEDAMKGDI 335          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: FRMA_ECOL6 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O6 GN=frmA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.324e-19
Identity = 64/208 (30.77%), Postives = 95/208 (45.67%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEI 612
            H   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K E    FG TD INP+D  +K I +++  I +  G+D+ FEC G  +++  ALE+                    +  P  ++     GR  KG+ FGG+K +S LP +++     +I
Sbjct:  134 HYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFELARRFGATDCINPNDY-DKPIKDVLLDI-NKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVT----GRVWKGSAFGGVKGRSQLPGMVEDAMKGDI 335          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: FRMA_ECOL5 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.324e-19
Identity = 64/208 (30.77%), Postives = 95/208 (45.67%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEI 612
            H   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K E    FG TD INP+D  +K I +++  I +  G+D+ FEC G  +++  ALE+                    +  P  ++     GR  KG+ FGG+K +S LP +++     +I
Sbjct:  134 HYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFELARRFGATDCINPNDY-DKPIKDVLLDI-NKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVT----GRVWKGSAFGGVKGRSQLPGMVEDAMKGDI 335          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: FRMA_ECOK1 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=frmA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.324e-19
Identity = 64/208 (30.77%), Postives = 95/208 (45.67%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEI 612
            H   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K E    FG TD INP+D  +K I +++  I +  G+D+ FEC G  +++  ALE+                    +  P  ++     GR  KG+ FGG+K +S LP +++     +I
Sbjct:  134 HYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFELARRFGATDCINPNDY-DKPIKDVLLDI-NKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVT----GRVWKGSAFGGVKGRSQLPGMVEDAMKGDI 335          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: ADH1G_PAPHA (Alcohol dehydrogenase 1C OS=Papio hamadryas GN=ADH1C PE=2 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 1.324e-19
Identity = 66/197 (33.50%), Postives = 92/197 (46.70%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTM-VPLNVIALACGGRTLKGTTFGGIKTKSDLPILL 588
            H    ST+S+Y V+D N V ++D +  L     + CGF+TGYG A K AKV                      +  GAA+II +D N  K  K +  G T+ INP D   K I E++K +T G GVD+ FE  G    +  +L                 D+  + +N + L   GRT KG  FGG K+K  +P L+
Sbjct:  140 HFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGPAVKVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTIMASLLCCHEACGTSVIVGVPPDSQNLSINPVLLLT-GRTWKGAIFGGFKSKESVPKLV 333          
The following BLAST results are available for this feature:
BLAST of EY675259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
ADH1_ORYSI5.943e-2031.73Alcohol dehydrogenase 1 OS=Oryza sativa subsp. ind... [more]
ADH1A_MACMU5.943e-2032.99Alcohol dehydrogenase 1A OS=Macaca mulatta GN=ADH1... [more]
ADHX_UROHA1.014e-1933.33Alcohol dehydrogenase class-3 OS=Uromastyx hardwic... [more]
ADH1_ALLMI1.014e-1934.15Alcohol dehydrogenase 1 OS=Alligator mississippien... [more]
ADH7_HUMAN1.289e-1932.65Alcohol dehydrogenase class 4 mu/sigma chain OS=Ho... [more]
FRMA_ECOUT1.324e-1930.77S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOL61.324e-1930.77S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOL51.324e-1930.77S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOK11.324e-1930.77S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
ADH1G_PAPHA1.324e-1933.50Alcohol dehydrogenase 1C OS=Papio hamadryas GN=ADH... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-008-C08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675259 ID=EY675259; Name=EY675259; organism=Citrus sinensis; type=EST; length=987bp
CACATTTTTTCATGCTCCACTTGGTCTGAATATATGGTCATCGATGCCAA
TTATGTACTCAGAGTTGATCCAAGCATAGACCTTTCGCATGCTAGCTTCC
TTTCATGTGGATTTACAACTGGTTATGGGGCGGCTTGGAAGGAAGCCAAA
GTTGAAAAAGGATCTAGTGTTGCTGTTTTAGGCCTTGGTACTGTTGGATT
AGGGGCTGTTGATGGAGCCAGGATGCAAGGGGCAGCTAAGATAATTGGGA
TAGACAAGAACCCATGGAAAAAAGAAAAGGGGGAAGCTTTTGGAATGACA
GATTTCATAAACCCTGATGATGAACCAAACAAGTCAATTTCAGAATTGGT
CAAGGGGATAACTCATGGAATGGGTGTGGATTATTGCTTCGAGTGCACTG
GGGTTCCATCTTTACTTTCTGAAGCACTTGAAACCACAAAAGTGGGAAAA
GGAAAAGTGATAGTAATTGGGGTGGGAGTTGATACCATGGTGCCACTGAA
CGTAATCGCTCTTGCATGTGGTGGTCGGACTTTGAAAGGGACCACTTTTG
GTGGGATCAAAACAAAATCCGACCTTCCGATACTGCTTGACAAATGCAAG
AACAAGGAAATTTAAACTCCTTCAACTCTTGACCCATCATGTTAAAATTG
AAAAAAAATCACAAAGGCATTTCACCCGGTTGAAGAAACCGGATTGTGGT
AAGGGCCCGGATCCCAAATTGAATCGGGTTTTACCCAAGGCCCCCCCTTG
GGGAAAATTTCCGGAATAAAAAACTTAAAAAATCCGGCCCTTGGAAAACC
CCTTTTCTTTTTTTTTTTTCCCCCCCCCAAACCCCCCCCCCCCCCAAACC
CCCTCAAATTTTTGTAAAAAAAAAAAAAAAAAAAGAGGGAATTTTTTTTT
CCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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