EY675259

Overview
NameEY675259
Unique NameEY675259
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length987
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8531 contig Csv1_Contig8531:1..987. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: FRMA_SYNY3 (S-(hydroxymethyl)glutathione dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=frmA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.729e-19
Identity = 65/208 (31.25%), Postives = 93/208 (44.71%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEI 612
            H   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K E  +  G TD INP D  ++ I +++  +T G GVD+ FEC G   ++  ALE                     +  P  ++     GR   GT FGG+K +S LP ++++    EI
Sbjct:  134 HYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGGIGLAVVQGARQAKAGRIIAIDTNPAKFELAKQMGATDCINPKDH-DQPIQQVIVEMT-GWGVDHSFECIGNVEVMRSALECAHRGWGQSVIIGVAGAGQEISTRPFQLVT----GRKWMGTAFGGVKGRSQLPGMVEQSMRGEI 335          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: ADH1_STRCA (Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.729e-19
Identity = 72/229 (31.44%), Postives = 101/229 (44.10%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEI*TPSTLDPSC*N*KKITKAFHPVEE 687
            H    ST++EY V+    V ++D +  L     + CGF+TGYGAA + AKVE                     +  GA++IIG+D N  K  K +  G TD +NP D   K I E++  +T G+GVDY FE  G    ++ AL +                         L   GRT KG+ FGG K+K  +P L+     K+      LDP   +    T  FH + E
Sbjct:  139 HFAGTSTFTEYTVLHETAVAKIDAAAPLEKVCLIGCGFSTGYGAALQTAKVEPGSTCAVFGLGGVGLSVVMGCKAAGASRIIGVDINKDKFAKAKELGATDCVNPKDF-TKPIHEVLMEMT-GLGVDYSFEVIGHTETMAAALASCHFNYGVSVIVGVPPAAEKLSFDPMLLFSGRTWKGSVFGGWKSKDSVPKLVADYMEKKF----VLDPLITH----TLPFHKINE 357          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: ADH1G_HUMAN (Alcohol dehydrogenase 1C OS=Homo sapiens GN=ADH1C PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.729e-19
Identity = 66/197 (33.50%), Postives = 93/197 (47.21%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTM-VPLNVIALACGGRTLKGTTFGGIKTKSDLPILL 588
            H    ST+S+Y V+D N V ++D +  L     + CGF+TGYG+A K AKV                      +  GAA+II +D N  K  K +  G T+ INP D   K I E++K +T G GVD+ FE  G    +  +L                 D+  + +N + L   GRT KG  FGG K+K  +P L+
Sbjct:  140 HFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSINPMLLLT-GRTWKGAIFGGFKSKESVPKLV 333          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: ADHX_DICDI (Alcohol dehydrogenase class-3 OS=Dictyostelium discoideum GN=adh5 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.258e-19
Identity = 70/210 (33.33%), Postives = 96/210 (45.71%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINP--DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEI 612
            H    ST+S+Y V+       V     L     L CG TTG+GAA   AKVE+                       GA +IIGID N  K   G+ FG T+FINP  D    K+I + +  IT G GVDY FEC G  +++  ALE                     +  P  ++     GR  KG+ FGG+K++S LP ++DK  +K++
Sbjct:  141 HFMGTSTFSQYTVLPEISCCVVREDAPLDKVCLLGCGITTGFGAAKITAKVEEGSTVAIFGLGAVGLSVAQGAVDCGAKRIIGIDNNETKFGPGKDFGCTEFINPSKDLPEGKTIQQHLVDITDG-GVDYSFECIGNVNVMRAALECCHKGWGVSTIVGVAPAGAEISTRPFQLVT----GRVWKGSAFGGVKSRSQLPSIIDKYMDKKL 345          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: FRMA_SHISS (S-(hydroxymethyl)glutathione dehydrogenase OS=Shigella sonnei (strain Ss046) GN=frmA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.949e-19
Identity = 63/208 (30.29%), Postives = 95/208 (45.67%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEI 612
            H   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K +    FG TD INP+D  +K I +++  I +  G+D+ FEC G  +++  ALE+                    +  P  ++     GR  KG+ FGG+K +S LP +++     +I
Sbjct:  134 HYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDY-DKPIKDVLLDI-NKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVT----GRVWKGSAFGGVKGRSQLPGMVEDAMKGDI 335          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: FRMA_ECOSM (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.949e-19
Identity = 63/208 (30.29%), Postives = 95/208 (45.67%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEI 612
            H   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K +    FG TD INP+D  +K I +++  I +  G+D+ FEC G  +++  ALE+                    +  P  ++     GR  KG+ FGG+K +S LP +++     +I
Sbjct:  134 HYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPDDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDY-DKPIKDVLLDI-NKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVT----GRVWKGSAFGGVKGRSQLPGMVEDAMKGDI 335          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: FRMA_ECOLC (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=frmA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.949e-19
Identity = 63/208 (30.29%), Postives = 95/208 (45.67%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEI 612
            H   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K +    FG TD INP+D  +K I +++  I +  G+D+ FEC G  +++  ALE+                    +  P  ++     GR  KG+ FGG+K +S LP +++     +I
Sbjct:  134 HYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDY-DKPIKDVLLDI-NKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVT----GRVWKGSAFGGVKGRSQLPGMVEDAMKGDI 335          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: FRMA_ECOHS (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=frmA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.949e-19
Identity = 63/208 (30.29%), Postives = 95/208 (45.67%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEI 612
            H   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K +    FG TD INP+D  +K I +++  I +  G+D+ FEC G  +++  ALE+                    +  P  ++     GR  KG+ FGG+K +S LP +++     +I
Sbjct:  134 HYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDY-DKPIKDVLLDI-NKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVT----GRVWKGSAFGGVKGRSQLPGMVEDAMKGDI 335          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: FRMA_ECO57 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O157:H7 GN=frmA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.949e-19
Identity = 63/208 (30.29%), Postives = 95/208 (45.67%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEI 612
            H   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K +    FG TD INP+D  +K I +++  I +  G+D+ FEC G  +++  ALE+                    +  P  ++     GR  KG+ FGG+K +S LP +++     +I
Sbjct:  134 HYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDY-DKPIKDVLLDI-NKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVT----GRVWKGSAFGGVKGRSQLPGMVEDAMKGDI 335          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: FRMA_ECO24 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.949e-19
Identity = 63/208 (30.29%), Postives = 95/208 (45.67%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEI 612
            H   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K +    FG TD INP+D  +K I +++  I +  G+D+ FEC G  +++  ALE+                    +  P  ++     GR  KG+ FGG+K +S LP +++     +I
Sbjct:  134 HYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDY-DKPIKDVLLDI-NKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVT----GRVWKGSAFGGVKGRSQLPGMVEDAMKGDI 335          
The following BLAST results are available for this feature:
BLAST of EY675259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
FRMA_SYNY31.729e-1931.25S-(hydroxymethyl)glutathione dehydrogenase OS=Syne... [more]
ADH1_STRCA1.729e-1931.44Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH... [more]
ADH1G_HUMAN1.729e-1933.50Alcohol dehydrogenase 1C OS=Homo sapiens GN=ADH1C ... [more]
ADHX_DICDI2.258e-1933.33Alcohol dehydrogenase class-3 OS=Dictyostelium dis... [more]
FRMA_SHISS2.949e-1930.29S-(hydroxymethyl)glutathione dehydrogenase OS=Shig... [more]
FRMA_ECOSM2.949e-1930.29S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOLC2.949e-1930.29S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOHS2.949e-1930.29S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECO572.949e-1930.29S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECO242.949e-1930.29S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-008-C08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675259 ID=EY675259; Name=EY675259; organism=Citrus sinensis; type=EST; length=987bp
CACATTTTTTCATGCTCCACTTGGTCTGAATATATGGTCATCGATGCCAA
TTATGTACTCAGAGTTGATCCAAGCATAGACCTTTCGCATGCTAGCTTCC
TTTCATGTGGATTTACAACTGGTTATGGGGCGGCTTGGAAGGAAGCCAAA
GTTGAAAAAGGATCTAGTGTTGCTGTTTTAGGCCTTGGTACTGTTGGATT
AGGGGCTGTTGATGGAGCCAGGATGCAAGGGGCAGCTAAGATAATTGGGA
TAGACAAGAACCCATGGAAAAAAGAAAAGGGGGAAGCTTTTGGAATGACA
GATTTCATAAACCCTGATGATGAACCAAACAAGTCAATTTCAGAATTGGT
CAAGGGGATAACTCATGGAATGGGTGTGGATTATTGCTTCGAGTGCACTG
GGGTTCCATCTTTACTTTCTGAAGCACTTGAAACCACAAAAGTGGGAAAA
GGAAAAGTGATAGTAATTGGGGTGGGAGTTGATACCATGGTGCCACTGAA
CGTAATCGCTCTTGCATGTGGTGGTCGGACTTTGAAAGGGACCACTTTTG
GTGGGATCAAAACAAAATCCGACCTTCCGATACTGCTTGACAAATGCAAG
AACAAGGAAATTTAAACTCCTTCAACTCTTGACCCATCATGTTAAAATTG
AAAAAAAATCACAAAGGCATTTCACCCGGTTGAAGAAACCGGATTGTGGT
AAGGGCCCGGATCCCAAATTGAATCGGGTTTTACCCAAGGCCCCCCCTTG
GGGAAAATTTCCGGAATAAAAAACTTAAAAAATCCGGCCCTTGGAAAACC
CCTTTTCTTTTTTTTTTTTCCCCCCCCCAAACCCCCCCCCCCCCCAAACC
CCCTCAAATTTTTGTAAAAAAAAAAAAAAAAAAAGAGGGAATTTTTTTTT
CCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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