EY675259

Overview
NameEY675259
Unique NameEY675259
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length987
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: FRMA_HAEIN (S-(hydroxymethyl)glutathione dehydrogenase OS=Haemophilus influenzae GN=frmA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.852e-19
Identity = 62/208 (29.81%), Postives = 98/208 (47.12%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEI 612
            H   CST+SEY V+    + +++P  +      L CG TTG GA    AKV++                    R   A +II ID NP K E  + FG TD +NP+D  +K I +++  I +  G+D+ FEC G  +++ +ALE+                    +  P  ++     GR  KG+ FGG+K +S+LP +++     +I
Sbjct:  143 HYMGCSTFSEYSVVAEVSLAKINPEANHEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPAKFELAKQFGATDCLNPNDY-DKPIKDVLLDI-NKWGIDHTFECIGNVNVMRQALESAHRGWGQSIIIGVAGAGQEISTRPFQLVT----GRVWKGSAFGGVKGRSELPQMVEDSMKGDI 344          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: ADHI_RHOS4 (Alcohol dehydrogenase class-3 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=adhI PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.852e-19
Identity = 62/201 (30.85%), Postives = 85/201 (42.29%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGM----GVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLD 591
            H   CST+S Y V+    V +V P        ++ CG TTG GA    AKVE                     ++ GA  IIG+D N  KKE GE FGMT F+NP +     ++ LV           G DY F+CTG   ++ +ALE                              GR  KG+ FGG + ++D+P ++D
Sbjct:  135 HYMGCSTFSNYTVLPEIAVAKVRPDAPFDKICYIGCGVTTGIGAVINTAKVEIGAKAVVFGLGGIGLNVIQGLKLAGADMIIGVDLNNAKKEWGERFGMTHFVNPSEIDGDVVAHLVNMTKTPFDQIGGADYTFDCTGNVKVMRQALEACHRGWGQSIVIGVAPAGAEIQTRPFQLVTGRVWKGSAFGGARGRTDVPKIVD 335          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: ADH7_MOUSE (Alcohol dehydrogenase class 4 mu/sigma chain OS=Mus musculus GN=Adh7 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.852e-19
Identity = 67/203 (33.00%), Postives = 95/203 (46.80%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKE 609
            H  + ST++EY V+D + V +VD +     A  + CGF+TGYGAA K AKV                      +  GA++IIGID N  K +K  A G T+ I+P D   K ISE++  +T G  V Y FE  G    + +AL +                  +      L   GRT KG  FGG K++ D+P L+ +   K+
Sbjct:  139 HFMNTSTFTEYTVLDESSVAKVDGAAPPEKACLIGCGFSTGYGAAVKTAKVTPGSTCVVFGLGGVGLSVIMGCKAAGASRIIGIDINKDKFQKALAVGATECISPKDS-TKPISEVLSDMT-GNTVQYTFEVIGRLETMVDALSSCHMNYGTSVVVGAPPSAKMLTYDPMLLFTGRTWKGCVFGGWKSRDDVPKLVTEFLEKK 339          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: FRMA_ECOLI (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain K12) GN=frmA PE=1 SV=3)

HSP 1 Score: 95.5153 bits (236), Expect = 5.031e-19
Identity = 63/208 (30.29%), Postives = 95/208 (45.67%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEI 612
            H   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K +    FG TD INP+D  +K I +++  I +  G+D+ FEC G  +++  ALE+                    +  P  ++     GR  KG+ FGG+K +S LP +++     +I
Sbjct:  134 HYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDY-DKPIKDVLLDI-NKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAVAGQEISTRPFQLVT----GRVWKGSAFGGVKGRSQLPGMVEDAMKGDI 335          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: ADH1E_HORSE (Alcohol dehydrogenase E chain OS=Equus caballus PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 5.031e-19
Identity = 63/196 (32.14%), Postives = 90/196 (45.92%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILL 588
            H    ST+S+Y V+D   V ++D +  L     + CGF+TGYG+A K AKV +                    +  GAA+IIG+D N  K  K +  G T+ +NP D   K I E++  +++G GVD+ FE  G    +  AL                 D+        L   GRT KG  FGG K+K  +P L+
Sbjct:  140 HFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLV 333          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: FRMA_PASPI (S-(hydroxymethyl)glutathione dehydrogenase OS=Pasteurella piscicida GN=frmA PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.571e-19
Identity = 62/208 (29.81%), Postives = 96/208 (46.15%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEI 612
            H   CST+SEY V+    + +++P  +      L CG TTG GA    AKV++                    R   A +I  ID NP K E  + FG TD INP+D  +K + +++  +T   GVD+ FEC G  +++  ALE+                    +  P  ++     GR  KGT FGG+K ++ LP +++   + +I
Sbjct:  134 HYMGCSTFSEYTVVAEVSLAKINPQANAEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGGIGLAVVQGARQAKAGRIFAIDTNPSKFELAKQFGATDCINPNDY-DKPVQQVLVEMTK-WGVDHTFECIGNVNVMRSALESAHRGWGQSVIIGVAGAGKEISTRPFQLVT----GRVWKGTAFGGVKGRTQLPGMVEDAMSGKI 335          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: ADH1_RAT (Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Adh1 PE=1 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 6.571e-19
Identity = 66/197 (33.50%), Postives = 94/197 (47.72%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG-VPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILL 588
            H  S ST+S+Y V+D   V ++D +  L     + CGF+TGYG+A + AKV                      +  GAAKII +D N  K  K +  G TD INP D   K I E+++ +T G GVD+ FE  G + ++ S  L                    + +N ++L   GRT KG  FGG K+K  +P L+
Sbjct:  141 HFISTSTFSQYTVVDDIAVAKIDAAAPLDKVCLIGCGFSTGYGSAVQVAKVTPGSTCAVFGLGGVGLSVVIGCKTAGAAKIIAVDINKDKFAKAKELGATDCINPQDY-TKPIQEVLQEMTDG-GVDFSFEVIGRLDTMTSALLSCHSACGVSVIVGVPPSAQSLSVNPMSLLL-GRTWKGAIFGGFKSKDAVPKLV 334          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: ADH1S_HORSE (Alcohol dehydrogenase S chain OS=Equus caballus PE=1 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 6.571e-19
Identity = 63/196 (32.14%), Postives = 90/196 (45.92%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILL 588
            H    ST+S+Y V+D   V ++D +  L     + CGF+TGYG+A K AKV +                    +  GAA+IIG+D N  K  K +  G T+ +NP D   K I E++  +++G GVD+ FE  G    +  AL                 D+        L   GRT KG  FGG K+K  +P L+
Sbjct:  139 HFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLV 332          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: ADH1A_PONAB (Alcohol dehydrogenase 1A OS=Pongo abelii GN=ADH1A PE=2 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 6.571e-19
Identity = 65/197 (32.99%), Postives = 93/197 (47.21%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTM-VPLNVIALACGGRTLKGTTFGGIKTKSDLPILL 588
            H    ST+S+Y V+D N V ++D +  L+    + CGF+TGYG+A   AKV                      +  GAA+II +D N  K  K +  G T+ INP D  NK I E++K +T G GVD+ FE  G    +  +L                 D+  + +N + L   GRT KG   GG K+K  +P L+
Sbjct:  140 HFLGISTFSQYTVVDENAVAKIDAASPLAKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-NKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSMNPMLLLT-GRTWKGAVLGGFKSKECVPKLV 333          
BLAST of EY675259 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 8.582e-19
Identity = 66/212 (31.13%), Postives = 94/212 (44.34%), Query Frame = 1
Query:    1 HIFSCSTWSEYMVIDANYVLRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEI*TPSTLDP 636
            H     T++EY V   + V+++D S  L     + CGF+TGYGAA   AKV+                     +  GA++IIGID N  K  K +  G T+ +NP D   K I+E++  +T G GV+Y FE  G    ++ AL +                         L   GRT KG+ FGG K+K  +P L+     K+      LDP
Sbjct:  139 HFVRTGTFTEYTVAPEDSVVKIDASAPLEKVCLIGCGFSTGYGAAINSAKVQPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINKEKFPKAKELGATECVNPLDY-KKPINEVLFDMTDGEGVEYSFEVIGRTDTMTAALASCHNNYGTSVIVGVPPSASQIAFDPLLLFTGRTWKGSVFGGWKSKDAVPRLVSDFMGKKF----ILDP 345          
The following BLAST results are available for this feature:
BLAST of EY675259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
FRMA_HAEIN3.852e-1929.81S-(hydroxymethyl)glutathione dehydrogenase OS=Haem... [more]
ADHI_RHOS43.852e-1930.85Alcohol dehydrogenase class-3 OS=Rhodobacter sphae... [more]
ADH7_MOUSE3.852e-1933.00Alcohol dehydrogenase class 4 mu/sigma chain OS=Mu... [more]
FRMA_ECOLI5.031e-1930.29S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
ADH1E_HORSE5.031e-1932.14Alcohol dehydrogenase E chain OS=Equus caballus PE... [more]
FRMA_PASPI6.571e-1929.81S-(hydroxymethyl)glutathione dehydrogenase OS=Past... [more]
ADH1_RAT6.571e-1933.50Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Ad... [more]
ADH1S_HORSE6.571e-1932.14Alcohol dehydrogenase S chain OS=Equus caballus PE... [more]
ADH1A_PONAB6.571e-1932.99Alcohol dehydrogenase 1A OS=Pongo abelii GN=ADH1A ... [more]
ADH1B_UROHA8.582e-1931.13Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-008-C08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675259 ID=EY675259; Name=EY675259; organism=Citrus sinensis; type=EST; length=987bp
CACATTTTTTCATGCTCCACTTGGTCTGAATATATGGTCATCGATGCCAA
TTATGTACTCAGAGTTGATCCAAGCATAGACCTTTCGCATGCTAGCTTCC
TTTCATGTGGATTTACAACTGGTTATGGGGCGGCTTGGAAGGAAGCCAAA
GTTGAAAAAGGATCTAGTGTTGCTGTTTTAGGCCTTGGTACTGTTGGATT
AGGGGCTGTTGATGGAGCCAGGATGCAAGGGGCAGCTAAGATAATTGGGA
TAGACAAGAACCCATGGAAAAAAGAAAAGGGGGAAGCTTTTGGAATGACA
GATTTCATAAACCCTGATGATGAACCAAACAAGTCAATTTCAGAATTGGT
CAAGGGGATAACTCATGGAATGGGTGTGGATTATTGCTTCGAGTGCACTG
GGGTTCCATCTTTACTTTCTGAAGCACTTGAAACCACAAAAGTGGGAAAA
GGAAAAGTGATAGTAATTGGGGTGGGAGTTGATACCATGGTGCCACTGAA
CGTAATCGCTCTTGCATGTGGTGGTCGGACTTTGAAAGGGACCACTTTTG
GTGGGATCAAAACAAAATCCGACCTTCCGATACTGCTTGACAAATGCAAG
AACAAGGAAATTTAAACTCCTTCAACTCTTGACCCATCATGTTAAAATTG
AAAAAAAATCACAAAGGCATTTCACCCGGTTGAAGAAACCGGATTGTGGT
AAGGGCCCGGATCCCAAATTGAATCGGGTTTTACCCAAGGCCCCCCCTTG
GGGAAAATTTCCGGAATAAAAAACTTAAAAAATCCGGCCCTTGGAAAACC
CCTTTTCTTTTTTTTTTTTCCCCCCCCCAAACCCCCCCCCCCCCCAAACC
CCCTCAAATTTTTGTAAAAAAAAAAAAAAAAAAAGAGGGAATTTTTTTTT
CCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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