EY675199

Overview
NameEY675199
Unique NameEY675199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length950
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675199 vs. ExPASy Swiss-Prot
Match: H31_STYLE (Histone H3-1 (Fragment) OS=Stylonychia lemnae GN=H3-1 PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 8.259e-48
Identity = 97/114 (85.09%), Postives = 107/114 (93.86%), Query Frame = 1
Query:   64 STGGKAPRKQLATKAARKSAPT--TGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 399
            +TG KAPR+QLA KAARK+A    +GGVKKPHR+RPGTVALREIRK+QKSTELLIRKLPFQRLVREIAQ++K+DLRFQS AVLALQEAAEAY+VGLFEDTNLCAIHAKRVTIMP
Sbjct:    1 NTGAKAPREQLANKAARKTAQVAQSGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQEYKSDLRFQSQAVLALQEAAEAYMVGLFEDTNLCAIHAKRVTIMP 114          
BLAST of EY675199 vs. ExPASy Swiss-Prot
Match: H36_STYLE (Histone H3-6 (Fragment) OS=Stylonychia lemnae GN=H3-6 PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.840e-47
Identity = 96/114 (84.21%), Postives = 106/114 (92.98%), Query Frame = 1
Query:   64 STGGKAPRKQLATKAARKS--APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 399
            +TGGKAPRK +A K A+KS  A  TGGVKKPHR+RPGTVALREIR++QKSTELLIRKLPFQRLVREIAQ++K+DLRFQS AVLALQEAAEAY+VGLFEDTNLCAIHAKRVTIMP
Sbjct:    1 NTGGKAPRKHIAHKQAKKSSAAAATGGVKKPHRFRPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQEYKSDLRFQSQAVLALQEAAEAYMVGLFEDTNLCAIHAKRVTIMP 114          
BLAST of EY675199 vs. ExPASy Swiss-Prot
Match: H33L1_CAEEL (Histone H3.3-like type 1 OS=Caenorhabditis elegans GN=his-70 PE=2 SV=3)

HSP 1 Score: 189.119 bits (479), Expect = 3.138e-47
Identity = 98/127 (77.17%), Postives = 109/127 (85.83%), Query Frame = 1
Query:   34 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQL 414
            MARTK TARKS GGKAPRK LATKAARK  P  G VKK  RYRP + AL+EIRKYQKSTELL+RKLPFQRLVRE+AQ+   ++RFQS A+ AL EAAEAYL+GLFEDTNLCAIHAKRVTIMPKD+Q+
Sbjct:    1 MARTKHTARKSFGGKAPRKSLATKAARKVFPVDGQVKK--RYRPSSNALKEIRKYQKSTELLVRKLPFQRLVREVAQEIMPNVRFQSAAIQALHEAAEAYLIGLFEDTNLCAIHAKRVTIMPKDMQV 125          
BLAST of EY675199 vs. ExPASy Swiss-Prot
Match: H35_STYLE (Histone H3-5 (Fragment) OS=Stylonychia lemnae GN=H3-5 PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 4.099e-47
Identity = 97/114 (85.09%), Postives = 104/114 (91.23%), Query Frame = 1
Query:   64 STGGKAPRKQLATKAARKSAPTTG--GVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 399
            +TG KAPRKQLA KAARKS       GVKKPHR+RPGTVALREIR++QKSTELLIRKLPFQRLVREIAQ++K+DLRFQS AVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP
Sbjct:    1 NTGAKAPRKQLANKAARKSTNVNAVSGVKKPHRFRPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQEYKSDLRFQSQAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 114          
BLAST of EY675199 vs. ExPASy Swiss-Prot
Match: H38_STYLE (Histone H3-8 (Fragment) OS=Stylonychia lemnae GN=H3-8 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 5.353e-47
Identity = 94/113 (83.19%), Postives = 102/113 (90.27%), Query Frame = 1
Query:   64 STGGKAPRKQLATKAARKSA-PTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 399
            +TG KAPRK LA KAARK+A P   G+KKPHRYRPGTVALREIRKYQKST+LLIRKLPFQRLVREIA ++K DLRFQS AVLALQEAAEAY++GLFEDTNLCAIH KRVTIMP
Sbjct:    1 NTGAKAPRKHLANKAARKTAAPANAGIKKPHRYRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIASEYKNDLRFQSSAVLALQEAAEAYMIGLFEDTNLCAIHGKRVTIMP 113          
BLAST of EY675199 vs. ExPASy Swiss-Prot
Match: H33_STYLE (Histone H3-3 (Fragment) OS=Stylonychia lemnae GN=H3-3 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.992e-47
Identity = 96/114 (84.21%), Postives = 104/114 (91.23%), Query Frame = 1
Query:   64 STGGKAPRKQLATKAARKS--APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 399
            +TGGKAPRK +A K A+KS  A  TGGVKKPHR+RPGTVALREIR++QKSTELLIRKLPFQRLVREIA +FK DLRFQS AVLALQEA+EAYLVGLFEDTNLCAIHAKRVTIMP
Sbjct:    1 NTGGKAPRKHIAHKQAKKSSAAAATGGVKKPHRFRPGTVALREIRRFQKSTELLIRKLPFQRLVREIASEFKNDLRFQSSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMP 114          
BLAST of EY675199 vs. ExPASy Swiss-Prot
Match: H3L4_ARATH (Histone H3-like 4 OS=Arabidopsis thaliana GN=At5g12910 PE=2 SV=3)

HSP 1 Score: 187.578 bits (475), Expect = 9.132e-47
Identity = 96/135 (71.11%), Postives = 115/135 (85.19%), Query Frame = 1
Query:   34 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 438
            MAR+ QTARK+TGGKAP    A +  + S P    +KKP+RY+PGTVALREIRKYQK+T+L+IRKLPFQRLV+EIAQ  K DLRFQ+ AV ALQEAAEA++VG+FEDTNLCA+HAKR TIMPKDIQLA+R+RG+R
Sbjct:    1 MARSNQTARKATGGKAPH--FAMRVWQHSTPP---LKKPYRYKPGTVALREIRKYQKTTDLVIRKLPFQRLVKEIAQSLKADLRFQTGAVSALQEAAEAFMVGMFEDTNLCAMHAKRSTIMPKDIQLAKRLRGDR 130          
BLAST of EY675199 vs. ExPASy Swiss-Prot
Match: H39_STYLE (Histone H3-2 (Fragment) OS=Stylonychia lemnae GN=H3-2 PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 7.730e-46
Identity = 95/114 (83.33%), Postives = 103/114 (90.35%), Query Frame = 1
Query:   64 STGGKAPRKQLATKAARKS--APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 399
            +TGGKAPRK +A K A+KS  A  TGGVKKPHR+RPGTVALREIR++QKSTELLIRKLPFQRLVREIA +FK DLRFQS AVLALQEA+EAYLVGLFEDTNL AIHAKRVTIMP
Sbjct:    1 NTGGKAPRKHIAHKQAKKSSAAAATGGVKKPHRFRPGTVALREIRRFQKSTELLIRKLPFQRLVREIASEFKNDLRFQSSAVLALQEASEAYLVGLFEDTNLAAIHAKRVTIMP 114          
BLAST of EY675199 vs. ExPASy Swiss-Prot
Match: H37_STYLE (Histone H3-7 (Fragment) OS=Stylonychia lemnae GN=H3-7 PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 7.730e-46
Identity = 95/114 (83.33%), Postives = 103/114 (90.35%), Query Frame = 1
Query:   64 STGGKAPRKQLATKAARKS--APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 399
            +TGGKAPRK +A K A+KS  A  TGGVKKPHR+RPGTVALREIR++QKSTELLIRKLPFQRLVREIA +FK DLRFQS AVLALQEA+EAYLVGLFEDTNL AIHAKRVTIMP
Sbjct:    1 NTGGKAPRKHIAHKQAKKSSAAAATGGVKKPHRFRPGTVALREIRRFQKSTELLIRKLPFQRLVREIASEFKNDLRFQSSAVLALQEASEAYLVGLFEDTNLAAIHAKRVTIMP 114          
BLAST of EY675199 vs. ExPASy Swiss-Prot
Match: H31_ENCCU (Histone H3.1 OS=Encephalitozoon cuniculi GN=HHT1 PE=3 SV=3)

HSP 1 Score: 164.081 bits (414), Expect = 1.081e-39
Identity = 83/135 (61.48%), Postives = 104/135 (77.04%), Query Frame = 1
Query:   34 MARTKQTARKSTGGKAPRKQLATKAARKS-APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFK--TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 429
            MARTKQ+ARK+TGGKAPRKQL+ K+ARK  +P +    K  RYRPG+VAL+EIR+YQKST+ LIR+LPFQR  R + ++    TD+RFQ  A+ ++QEA E YLVGLFED  LCA HAKRVT+ PKDI L  ++R
Sbjct:    1 MARTKQSARKTTGGKAPRKQLSAKSARKGVSPASSAGAKKSRYRPGSVALKEIRRYQKSTDFLIRRLPFQRACRSVVKECSNATDIRFQGPALASIQEALEVYLVGLFEDAMLCAYHAKRVTVFPKDISLVLKLR 135          
The following BLAST results are available for this feature:
BLAST of EY675199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 212
Match NameE-valueIdentityDescription
H31_STYLE8.259e-4885.09Histone H3-1 (Fragment) OS=Stylonychia lemnae GN=H... [more]
H36_STYLE1.840e-4784.21Histone H3-6 (Fragment) OS=Stylonychia lemnae GN=H... [more]
H33L1_CAEEL3.138e-4777.17Histone H3.3-like type 1 OS=Caenorhabditis elegans... [more]
H35_STYLE4.099e-4785.09Histone H3-5 (Fragment) OS=Stylonychia lemnae GN=H... [more]
H38_STYLE5.353e-4783.19Histone H3-8 (Fragment) OS=Stylonychia lemnae GN=H... [more]
H33_STYLE6.992e-4784.21Histone H3-3 (Fragment) OS=Stylonychia lemnae GN=H... [more]
H3L4_ARATH9.132e-4771.11Histone H3-like 4 OS=Arabidopsis thaliana GN=At5g1... [more]
H39_STYLE7.730e-4683.33Histone H3-2 (Fragment) OS=Stylonychia lemnae GN=H... [more]
H37_STYLE7.730e-4683.33Histone H3-7 (Fragment) OS=Stylonychia lemnae GN=H... [more]
H31_ENCCU1.081e-3961.48Histone H3.1 OS=Encephalitozoon cuniculi GN=HHT1 P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-007-D11-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675199 ID=EY675199; Name=EY675199; organism=Citrus sinensis; type=EST; length=950bp
GAAATTGAGTGGAACAGTTGAAGAAACTCAGAGATGGCCCGTACCAAGCA
AACTGCACGTAAGTCAACCGGAGGAAAGGCTCCTAGGAAGCAACTTGCTA
CCAAGGCCGCCCGTAAGTCTGCGCCCACCACCGGTGGTGTTAAGAAGCCT
CATCGTTACCGTCCTGGAACCGTCGCCCTTCGAGAAATTCGCAAGTACCA
GAAGAGTACCGAGCTGCTTATCAGGAAACTCCCATTCCAGAGACTTGTTC
GTGAAATTGCTCAGGACTTTAAGACTGATCTGCGTTTCCAGAGCCATGCA
GTACTGGCCCTGCAGGAGGCAGCGGAGGCTTACCTTGTTGGTCTCTTCGA
GGACACTAACCTCTGCGCCATTCATGCAAAGCGTGTCACTATTATGCCCA
AGGACATACAGCTTGCCCGTAGGATCCGTGGCGAGCGTGCTTAAACGTAA
TTGCTGCTTGCTTTCATTGAATGACTGGAAGGGAAGGGGGAGATTGAATG
TGTTAAATTTGTAAATGGGGGTTGGTGGGGGAGAAATAAGGGTGAGAATA
AGAAACGAAAAAGAAAAGCGGATAAGAGAAGCAACGCAAAATAGATGAAC
AAAAAGAGAGAAGAGAAAAAAAAAACAAAATAATAAGAAGGACCACAAAG
AGAAGGCGAGGAAAACCCGAAGAAGAAGGAGACACGATAAGGGAAGAAAA
CGAAGCAGAAACAAATAAGCGCACACAAAAAACGCAAAAAAAGACCAGCA
GAGGACCAACACAACACGAAATAAAACAGAAAAAGAAAAACAAAAAGAAA
CAGCAACAGGGACGAAGAAAGAAAAATCGAAACACAGAACCAGAAAGAAG
CAAAAGCAAAAGAGAGAAAGCATCCCATGCCAGGACAACAAAAGTCACAA
GACGACCGAACCACAAATTACNGCACAAAAGCAAATGAGAGAGGAGAGAC
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