EY675199

Overview
NameEY675199
Unique NameEY675199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length950
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675199 vs. ExPASy Swiss-Prot
Match: CENPA_ASHGO (Histone H3-like centromeric protein CSE4 OS=Ashbya gossypii GN=CSE4 PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.378e-31
Identity = 74/141 (52.48%), Postives = 97/141 (68.79%), Query Frame = 1
Query:   22 RNSEMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT---DLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 435
            R +E A  +  A  +   + P +    +  R+ A      KKP RYRP  VAL+EIR+YQ+STELLI ++PF RLV+E+   F T    +R+QS A+LALQEA+EAY+VGL E TNL A+HAKRVT+M KD+QLARRIRG+
Sbjct:   68 RVAEPAAAESRADGAREEERPARPARPRETRRIA------KKPQRYRPSDVALQEIRRYQRSTELLISRMPFARLVKEVTDQFTTVDQQMRWQSMAILALQEASEAYIVGLLEHTNLLALHAKRVTVMRKDMQLARRIRGQ 202          
BLAST of EY675199 vs. ExPASy Swiss-Prot
Match: H3L_ENCCU (Histone H3-like protein OS=Encephalitozoon cuniculi GN=ECU09_0450 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.044e-30
Identity = 71/135 (52.59%), Postives = 97/135 (71.85%), Query Frame = 1
Query:   34 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTG---GVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 429
            M+RTKQTA K+ GGKAPRK ++ K    S P++G    + K  R++ G +AL+EIRKYQKST+LLIRK PFQR+VR++ +  +  +RFQ+ A++A QEA E +L  L ED   C +HAKRVT+MPKDI L  +I+
Sbjct:    1 MSRTKQTASKALGGKAPRKGISAK----SIPSSGCSPAMPKRTRFKAGALALKEIRKYQKSTDLLIRKRPFQRMVRDLCKG-REGVRFQASAIVAFQEAVENFLTSLMEDAYRCVLHAKRVTLMPKDICLVYKIK 130          
BLAST of EY675199 vs. ExPASy Swiss-Prot
Match: CENPA_YARLI (Histone H3-like centromeric protein CSE4 OS=Yarrowia lipolytica GN=CSE4 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.044e-30
Identity = 75/125 (60.00%), Postives = 91/125 (72.80%), Query Frame = 1
Query:   70 GGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT----DLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 432
            GG  P  Q       +   TT  + KP RY+PG  AL+EIR+YQ+ TELLI KLPF R+VRE+A ++      +L++QS A+LALQEAAEA+LV LFED NLCAIHAKRVTIM KD+QLARRIRG
Sbjct:   21 GGLHPLGQTRKTLPGERRDTTQKITKP-RYKPGQKALKEIRRYQRGTELLIAKLPFARVVREVALNYLGSEYGNLQWQSMALLALQEAAEAFLVHLFEDVNLCAIHAKRVTIMQKDMQLARRIRG 144          
BLAST of EY675199 vs. ExPASy Swiss-Prot
Match: CENPA_YEAST (Histone H3-like centromeric protein CSE4 OS=Saccharomyces cerevisiae GN=CSE4 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 1.121e-28
Identity = 64/97 (65.98%), Postives = 80/97 (82.47%), Query Frame = 1
Query:  154 RYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT---DLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 435
            +Y P  +AL EIRKYQ+ST+LLI K+PF RLV+E+  +F T   DLR+QS A++ALQEA+EAYLVGL E TNL A+HAKR+TIM KD+QLARRIRG+
Sbjct:  131 KYTPSELALYEIRKYQRSTDLLISKIPFARLVKEVTDEFTTKDQDLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMKKDMQLARRIRGQ 227          
BLAST of EY675199 vs. ExPASy Swiss-Prot
Match: CENPA_XENLA (Histone H3-like centromeric protein A OS=Xenopus laevis GN=cenpa PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.261e-28
Identity = 74/139 (53.24%), Postives = 93/139 (66.91%), Query Frame = 1
Query:   22 RNSEMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF--QSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 432
            R S   R       +T   +PR+  A +  R S  +    KK  R+RPGT AL EIRKYQKSTELLIRK PF RLVRE+   +   + +  QS A++ALQEA+EA+LV LFED+ LC++HAKRVT+  +DIQLARRIRG
Sbjct:   11 RKSRPPRRVSPPLPTTSRTSPRRPHAQQQRRASRASP---KK--RFRPGTRALMEIRKYQKSTELLIRKAPFSRLVREVCMTYACGMNYNWQSMALMALQEASEAFLVRLFEDSYLCSLHAKRVTLYVQDIQLARRIRG 144          
BLAST of EY675199 vs. ExPASy Swiss-Prot
Match: CENPA_KLULA (Histone H3-like centromeric protein CSE4 OS=Kluyveromyces lactis GN=CSE4 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.261e-28
Identity = 63/97 (64.95%), Postives = 80/97 (82.47%), Query Frame = 1
Query:  154 RYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTD---LRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 435
            RY+P  +AL EIRKYQ+ST+LLI ++PF RLV+E+   F T+   LR+QS A++ALQEA+EAYLVGL E TNL A+HAKR+TIM KD+QLARRIRG+
Sbjct:   86 RYKPTDLALAEIRKYQRSTDLLISRMPFARLVKEVTDQFTTESEPLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMRKDMQLARRIRGQ 182          
BLAST of EY675199 vs. ExPASy Swiss-Prot
Match: CENPA_KLUMA (Histone H3-like centromeric protein CSE4 OS=Kluyveromyces marxianus GN=CSE4 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.566e-28
Identity = 62/97 (63.92%), Postives = 80/97 (82.47%), Query Frame = 1
Query:  154 RYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTD---LRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 435
            +Y+P  +AL EIRKYQ+ST+LLI ++PF RLV+E+   F +D   LR+QS A++ALQEA+EAYLVGL E TNL A+HAKR+TIM KD+QLARRIRG+
Sbjct:   94 KYKPSDLALAEIRKYQRSTDLLISRMPFARLVKEVTDQFASDEEPLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMRKDMQLARRIRGQ 190          
BLAST of EY675199 vs. ExPASy Swiss-Prot
Match: CENPA_XENTR (Histone H3-like centromeric protein A OS=Xenopus tropicalis GN=cenpa PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.494e-28
Identity = 72/130 (55.38%), Postives = 90/130 (69.23%), Query Frame = 1
Query:   52 TARKSTGG-KAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF--QSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 432
            T+ +S G   AP ++ A +A  K            R+RPGT AL EIRKYQKSTELLIRK PF RLVRE+   +   L +  QS A++ALQEA+EA+LV LFED+ LC++HAKRVT+  +DIQLARRIRG
Sbjct:   26 TSTRSPGRPSAPEQRKAPRATPKK-----------RFRPGTRALMEIRKYQKSTELLIRKAPFSRLVREVCMTYACGLNYSWQSMALMALQEASEAFLVRLFEDSYLCSLHAKRVTLYVQDIQLARRIRG 144          
BLAST of EY675199 vs. ExPASy Swiss-Prot
Match: CENPA_CANGA (Histone H3-like centromeric protein CSE4 OS=Candida glabrata GN=CSE4 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.608e-27
Identity = 61/101 (60.40%), Postives = 80/101 (79.21%), Query Frame = 1
Query:  142 KKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF---KTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 435
            K+   + P  +A+ EI KYQ+ST LLI+K+PF +LV+E+ ++F     DLR+QS A+LALQEA+EAYLVGL E TNL A+HAKR+TIM KD+QLARRIRG+
Sbjct:  138 KEKRNFAPSKLAMYEIEKYQRSTALLIQKIPFAKLVKEVTEEFAGESQDLRWQSMAILALQEASEAYLVGLLEHTNLLALHAKRITIMKKDMQLARRIRGQ 238          
BLAST of EY675199 vs. ExPASy Swiss-Prot
Match: CENPA_SACSE (Histone H3-like centromeric protein CSE4 OS=Saccharomyces servazzii GN=CSE4 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 8.037e-27
Identity = 62/101 (61.39%), Postives = 79/101 (78.22%), Query Frame = 1
Query:  142 KKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTD---LRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 435
            K   RYRP  +AL EIRKYQ+ST+LLI K+PF RLV+E+  +F  +   L++ S A+LALQEA+EAYLVGL E  NL A+HAKR+T+M KD+QLARRIRG+
Sbjct:  191 KTATRYRPSDLALYEIRKYQQSTDLLISKIPFARLVKEVTDNFILENQHLQWHSMAILALQEASEAYLVGLLEHANLLALHAKRITLMKKDVQLARRIRGQ 291          
The following BLAST results are available for this feature:
BLAST of EY675199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 212
Match NameE-valueIdentityDescription
CENPA_ASHGO5.378e-3152.48Histone H3-like centromeric protein CSE4 OS=Ashbya... [more]
H3L_ENCCU2.044e-3052.59Histone H3-like protein OS=Encephalitozoon cunicul... [more]
CENPA_YARLI2.044e-3060.00Histone H3-like centromeric protein CSE4 OS=Yarrow... [more]
CENPA_YEAST1.121e-2865.98Histone H3-like centromeric protein CSE4 OS=Saccha... [more]
CENPA_XENLA4.261e-2853.24Histone H3-like centromeric protein A OS=Xenopus l... [more]
CENPA_KLULA4.261e-2864.95Histone H3-like centromeric protein CSE4 OS=Kluyve... [more]
CENPA_KLUMA5.566e-2863.92Histone H3-like centromeric protein CSE4 OS=Kluyve... [more]
CENPA_XENTR9.494e-2855.38Histone H3-like centromeric protein A OS=Xenopus t... [more]
CENPA_CANGA3.608e-2760.40Histone H3-like centromeric protein CSE4 OS=Candid... [more]
CENPA_SACSE8.037e-2761.39Histone H3-like centromeric protein CSE4 OS=Saccha... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-007-D11-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675199 ID=EY675199; Name=EY675199; organism=Citrus sinensis; type=EST; length=950bp
GAAATTGAGTGGAACAGTTGAAGAAACTCAGAGATGGCCCGTACCAAGCA
AACTGCACGTAAGTCAACCGGAGGAAAGGCTCCTAGGAAGCAACTTGCTA
CCAAGGCCGCCCGTAAGTCTGCGCCCACCACCGGTGGTGTTAAGAAGCCT
CATCGTTACCGTCCTGGAACCGTCGCCCTTCGAGAAATTCGCAAGTACCA
GAAGAGTACCGAGCTGCTTATCAGGAAACTCCCATTCCAGAGACTTGTTC
GTGAAATTGCTCAGGACTTTAAGACTGATCTGCGTTTCCAGAGCCATGCA
GTACTGGCCCTGCAGGAGGCAGCGGAGGCTTACCTTGTTGGTCTCTTCGA
GGACACTAACCTCTGCGCCATTCATGCAAAGCGTGTCACTATTATGCCCA
AGGACATACAGCTTGCCCGTAGGATCCGTGGCGAGCGTGCTTAAACGTAA
TTGCTGCTTGCTTTCATTGAATGACTGGAAGGGAAGGGGGAGATTGAATG
TGTTAAATTTGTAAATGGGGGTTGGTGGGGGAGAAATAAGGGTGAGAATA
AGAAACGAAAAAGAAAAGCGGATAAGAGAAGCAACGCAAAATAGATGAAC
AAAAAGAGAGAAGAGAAAAAAAAAACAAAATAATAAGAAGGACCACAAAG
AGAAGGCGAGGAAAACCCGAAGAAGAAGGAGACACGATAAGGGAAGAAAA
CGAAGCAGAAACAAATAAGCGCACACAAAAAACGCAAAAAAAGACCAGCA
GAGGACCAACACAACACGAAATAAAACAGAAAAAGAAAAACAAAAAGAAA
CAGCAACAGGGACGAAGAAAGAAAAATCGAAACACAGAACCAGAAAGAAG
CAAAAGCAAAAGAGAGAAAGCATCCCATGCCAGGACAACAAAAGTCACAA
GACGACCGAACCACAAATTACNGCACAAAAGCAAATGAGAGAGGAGAGAC
back to top