EY675198

Overview
NameEY675198
Unique NameEY675198
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length977
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675198 vs. ExPASy Swiss-Prot
Match: MQO_ACIB3 (Probable malate:quinone oxidoreductase OS=Acinetobacter baumannii (strain AB307-0294) GN=mqo PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.385e-29
Identity = 67/147 (45.58%), Postives = 94/147 (63.95%), Query Frame = 3
Query:    3 VLVGAGIISATLAVLLKELDPGLKLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGSIDIKKAVHINTQFEVSKQFWAYLTKKGTFGSSKSFISPVPHLSFVQGEKGVSFLKKRFETLSQHHAFSDMAL--HPKTAAKW 437
            VLVG GI+SATL     EL+P  ++ + E +D  A ESSN +NNAGTGH+G  E+NYT +  +G ++I KA  + +QFEV+KQFW+Y  K+G     K+FI+PVPH++FV G+  V FL+KR+  + Q   F  M     P    +W
Sbjct:   44 VLVGGGIMSATLGTYFTELEPNWQIRMYERLDQVAQESSNGFNNAGTGHSGFMEMNYT-EEKNGKMEIAKAEKVASQFEVAKQFWSYQVKQGVLAEPKTFINPVPHIAFVWGD-NVKFLEKRYAAMIQSPLFKGMKFTEDPAVIKQW 188          
BLAST of EY675198 vs. ExPASy Swiss-Prot
Match: MQO_PROMS (Probable malate:quinone oxidoreductase OS=Prochlorococcus marinus (strain AS9601) GN=mqo PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.029e-29
Identity = 64/135 (47.41%), Postives = 92/135 (68.15%), Query Frame = 3
Query:    3 VLVGAGIISATLAVLLKELDPGLKLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGSIDIKKAVHINTQFEVSKQFWAYLTKKGTFGSSKSFISPVPHLSFVQGEKGVSFLKKRFETLSQHHAFSDM 407
            VLVGAGI+S+TLA+L+ E+ P +K  ++E +++  +ES+  +NNAGTGHA  CELNYTP    G++ I KA+ IN  FE S   WA L + G     K F+  +PH+SFV G+  +SFLKKRF+ ++++  F DM
Sbjct:   17 VLVGAGIMSSTLALLISEVLPDIKFLILEKLNAPGSESTGAFNNAGTGHAANCELNYTPLDEKGNLIIDKALSINRSFETSMSLWASLYEAGKI-DIKKFLKFIPHISFVSGQDNISFLKKRFQKMTENPEFIDM 150          
BLAST of EY675198 vs. ExPASy Swiss-Prot
Match: MQO_PROM2 (Probable malate:quinone oxidoreductase OS=Prochlorococcus marinus (strain MIT 9215) GN=mqo PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.029e-29
Identity = 63/135 (46.67%), Postives = 91/135 (67.41%), Query Frame = 3
Query:    3 VLVGAGIISATLAVLLKELDPGLKLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGSIDIKKAVHINTQFEVSKQFWAYLTKKGTFGSSKSFISPVPHLSFVQGEKGVSFLKKRFETLSQHHAFSDM 407
            VLVG GI+S+TLA+L+ E+ P +K  ++E +++  +ES+  +NNAGTGHA  CELNYTP    G++ I KA+ IN  FE S   WA L + G     K F+  +PH+SFV G+  +SFLKKRF+ ++++  F DM
Sbjct:   17 VLVGGGIMSSTLALLISEVLPDIKFLIIEKLNAPGSESTGAFNNAGTGHAANCELNYTPLDEKGNLKIDKALSINRSFETSMSLWASLYEAGKI-DIKKFLKFIPHISFVSGQDNISFLKKRFQKMTENPEFIDM 150          
BLAST of EY675198 vs. ExPASy Swiss-Prot
Match: MQO_PROM0 (Probable malate:quinone oxidoreductase OS=Prochlorococcus marinus (strain MIT 9301) GN=mqo PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.029e-29
Identity = 63/135 (46.67%), Postives = 91/135 (67.41%), Query Frame = 3
Query:    3 VLVGAGIISATLAVLLKELDPGLKLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGSIDIKKAVHINTQFEVSKQFWAYLTKKGTFGSSKSFISPVPHLSFVQGEKGVSFLKKRFETLSQHHAFSDM 407
            VLVG GI+S+TLA+L+ E+ P +K  ++E +++  +ES+  +NNAGTGHA  CELNYTP    G++ I KA+ IN  FE S   WA L + G     K F+  +PH+SFV G+  +SFLKKRF+ ++++  F DM
Sbjct:   17 VLVGGGIMSSTLALLISEVLPDIKFLIIEKLNAPGSESTGAFNNAGTGHAANCELNYTPLDEKGNLKIDKALSINRSFETSMSLWASLYEAGKI-DIKKFLKFIPHISFVSGQDNISFLKKRFQKMTENPEFIDM 150          
BLAST of EY675198 vs. ExPASy Swiss-Prot
Match: MQO_PROM9 (Probable malate:quinone oxidoreductase OS=Prochlorococcus marinus (strain MIT 9312) GN=mqo PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.872e-29
Identity = 64/135 (47.41%), Postives = 90/135 (66.67%), Query Frame = 3
Query:    3 VLVGAGIISATLAVLLKELDPGLKLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGSIDIKKAVHINTQFEVSKQFWAYLTKKGTFGSSKSFISPVPHLSFVQGEKGVSFLKKRFETLSQHHAFSDM 407
            VLVGAGI+S+TLA+L+ E+ P +K  ++E + +  +ES+  +NNAGTGHA  CELNYTP    G++ I KA+ IN  FE S   WA L + G     K F+  +PH+SFV G+  +SFLKKRF+ ++ +  F DM
Sbjct:   17 VLVGAGIMSSTLALLISEVLPDIKFLIIEKLKAPGSESTGAFNNAGTGHAANCELNYTPLDEKGNLKIDKALSINRSFERSMSLWASLYESGKI-DIKKFLKFIPHISFVSGQDNISFLKKRFQKMTDNPEFIDM 150          
BLAST of EY675198 vs. ExPASy Swiss-Prot
Match: MQO_PROM5 (Probable malate:quinone oxidoreductase OS=Prochlorococcus marinus (strain MIT 9515) GN=mqo PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.531e-28
Identity = 66/135 (48.89%), Postives = 88/135 (65.19%), Query Frame = 3
Query:    3 VLVGAGIISATLAVLLKELDPGLKLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGSIDIKKAVHINTQFEVSKQFWAYLTKKGTFGSSKSFISPVPHLSFVQGEKGVSFLKKRFETLSQHHAFSDM 407
            +LVGAGI+S TLA+LL E+ P LK+ ++E +    +ESS  +NNAGTGHA  CELNYTP    G + I+KA+ IN  FE S   WA L         K F+  +PH+SFV G + VSFLKKRF+ ++++  F DM
Sbjct:   16 ILVGAGIMSGTLALLLTEILPELKILIIEKLKIPGSESSGAFNNAGTGHAANCELNYTPLDDYGHLKIEKALSINRSFEKSMSLWASLYSSQKI-DIKKFLKFIPHISFVTGSENVSFLKKRFKKMTEYKEFEDM 149          
The following BLAST results are available for this feature:
BLAST of EY675198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
MQO_ACIB31.385e-2945.58Probable malate:quinone oxidoreductase OS=Acinetob... [more]
MQO_PROMS4.029e-2947.41Probable malate:quinone oxidoreductase OS=Prochlor... [more]
MQO_PROM24.029e-2946.67Probable malate:quinone oxidoreductase OS=Prochlor... [more]
MQO_PROM04.029e-2946.67Probable malate:quinone oxidoreductase OS=Prochlor... [more]
MQO_PROM96.872e-2947.41Probable malate:quinone oxidoreductase OS=Prochlor... [more]
MQO_PROM51.531e-2848.89Probable malate:quinone oxidoreductase OS=Prochlor... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-007-D10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675198 ID=EY675198; Name=EY675198; organism=Citrus sinensis; type=EST; length=977bp
TAGTACTGGTAGGTGCGGGCATCATCAGTGCCACCCTCGCCGTACTGCTC
AAAGAGCTCGACCCCGGCCTCAAGCTGGAAGTCGTTGAGCTGATGGATTC
GGGTGCCGCGGAAAGTTCCAACCCGTGGAACAACGCCGGTACCGGCCACG
CCGGGCTGTGTGAGCTGAACTACACACCGCAGGCCGCTGACGGCTCCATC
GACATCAAGAAAGCTGTGCACATCAACACCCAATTCGAGGTGTCGAAGCA
GTTCTGGGCTTACTTGACCAAGAAAGGCACCTTTGGCTCGTCCAAGTCCT
TTATCAGCCCCGTGCCGCACCTGAGTTTCGTGCAGGGCGAGAAAGGCGTG
TCGTTCCTCAAGAAGCGTTTTGAAACCCTCAGCCAGCACCACGCGTTCTC
GGACATGGCACTACACCCGAAGACCGCAGCGAAATGGCCGAGTGGATGCC
ACTGAATGAAGCCCCGGGCCGCCCCCCTGGAAAAAAAAATCCGCTGCCCA
CCCGCGTGATGAACGGAACAACGTCAATTTCCGGCGCCCTGACCCAACAA
ATTGGTCTAGCACCTAGACCACGCGCACCGGAATGCCCAAGTCAATTAAA
CACAGGACTGCACGGTCTCAAGCGCCTACGGGAGCCGGCTGGGAAGGAAA
GCACCAAGGACACCCAAACGCCCCAACTACCCTAAAAGGGGGACCGCGCG
ATCGGATGCCCAGGAGGGCCGGGGGGGGAAGAGGGATGGCGATGGGATAG
AATAGCGAGGGAAGAACAGAAGAAAAACAGTGGTTCGGACGGAAAACCCA
CAGAACAAAAACGAGAGGGAGGACGGAAGACAGCAGAAAGAAGATAGGAA
GAACGCAGACAGAAAAAATACAAGGAAACGAATAAAACAAGAAAGAAGAG
ACAAGAGGAAATAAGAACACGACTCCAGGCCCGACACGCTCAATGAGTCG
GCCAAAAAAAGCGATACGAACGCGAGA
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