EY675183
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675183 vs. ExPASy Swiss-Prot
Match: RL27A_HUMAN (60S ribosomal protein L27a OS=Homo sapiens GN=RPL27A PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 6.117e-20 Identity = 47/92 (51.09%), Postives = 66/92 (71.74%), Query Frame = 2 Query: 11 MRYFHTLRNKFHCPIVNVDTLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 277 M+++H RN+ CP VN+D LW++V ++ + A+K+ P+IDV + GY+KVLGKG LP+ QPV+VKAK S+ AE+KIK GGA VL A Sbjct: 58 MKHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEEKIKSVGGACVLVA 148
BLAST of EY675183 vs. ExPASy Swiss-Prot
Match: R27A2_ENTHI (60S ribosomal protein L27a-2/4 OS=Entamoeba histolytica GN=rpl27a-2 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 6.117e-20 Identity = 48/93 (51.61%), Postives = 67/93 (72.04%), Query Frame = 2 Query: 11 MRYFHTLRNKFHCPIVNVDTLWSMVPQEVKAKASK----DNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 277 MR FH NK++CP +NVD+LWS+V ++V+A+ + VP+ID + GYFKVLGKG LP+ QPV+V+A+ S+ A++KIK GGA LTA Sbjct: 58 MRVFHLKANKYYCPSINVDSLWSLVGKDVQAQYKNAKVGEEVPVIDCVKHGYFKVLGKGFLPK-QPVIVRARYFSEKAQQKIKAVGGACELTA 149
BLAST of EY675183 vs. ExPASy Swiss-Prot
Match: R27A1_ENTHI (60S ribosomal protein L27a-1 OS=Entamoeba histolytica GN=rpl27a-1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 7.989e-20 Identity = 47/93 (50.54%), Postives = 67/93 (72.04%), Query Frame = 2 Query: 11 MRYFHTLRNKFHCPIVNVDTLWSMVPQEVKAKASK----DNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 277 MR FH NK++CP +NVD+LWS+V ++++A+ + VP+ID + GYFKVLGKG LP+ QPV+V+A+ S+ A++KIK GGA LTA Sbjct: 58 MRVFHLKANKYYCPSINVDSLWSLVGKDIQAQYKNAKVGEEVPVIDCVKHGYFKVLGKGFLPK-QPVIVRARYFSEKAQQKIKAVGGACELTA 149
BLAST of EY675183 vs. ExPASy Swiss-Prot
Match: RL27A_PANTR (60S ribosomal protein L27a OS=Pan troglodytes GN=RPL27A PE=2 SV=3) HSP 1 Score: 94.7449 bits (234), Expect = 1.780e-19 Identity = 46/90 (51.11%), Postives = 65/90 (72.22%), Query Frame = 2 Query: 11 MRYFHTLRNKFHCPIVNVDTLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVL 271 M+++H RN+ CP VN+D LW++V ++ + A+K+ P+IDV + GY+KVLGKG LP+ QPV+VKAK S+ AE+KIK GGA VL Sbjct: 58 MKHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEEKIKSVGGACVL 146
BLAST of EY675183 vs. ExPASy Swiss-Prot
Match: R27A3_ENTHI (60S ribosomal protein L27a-3 OS=Entamoeba histolytica GN=rpl27a-3 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.780e-19 Identity = 48/93 (51.61%), Postives = 66/93 (70.97%), Query Frame = 2 Query: 11 MRYFHTLRNKFHCPIVNVDTLWSMVPQEV----KAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 277 MR FH NK++CP +NVD+LWS+V ++V K + + VP+ID + GYFKVLGKG LP+ QPV+V+A+ S+ A++KIK GGA LTA Sbjct: 58 MRVFHLKANKYYCPSINVDSLWSLVGKDVQEQYKNAKTGEEVPVIDCVKHGYFKVLGKGFLPK-QPVIVRARYFSEKAQQKIKAVGGACELTA 149
BLAST of EY675183 vs. ExPASy Swiss-Prot
Match: RL27A_MOUSE (60S ribosomal protein L27a OS=Mus musculus GN=Rpl27a PE=2 SV=4) HSP 1 Score: 93.9745 bits (232), Expect = 3.036e-19 Identity = 47/92 (51.09%), Postives = 65/92 (70.65%), Query Frame = 2 Query: 11 MRYFHTLRNKFHCPIVNVDTLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 277 MR++H RN+ CP VN+D W++V ++ + A+K+ P+IDV + GY+KVLGKG LP+ QPV+VKAK S+ AE+KIK GGA VL A Sbjct: 58 MRHYHLKRNQSFCPTVNLDKPWTLVSEQTRVNAAKNKTGVAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEEKIKGVGGACVLVA 148
BLAST of EY675183 vs. ExPASy Swiss-Prot
Match: R27A1_ARATH (Putative 60S ribosomal protein L27a-1 OS=Arabidopsis thaliana GN=RPL27AA PE=5 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 5.178e-19 Identity = 53/92 (57.61%), Postives = 57/92 (61.96%), Query Frame = 2 Query: 11 MRYFHTLRNKFHCPIVNVDTLWSMVPQEVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA*VY 286 MRYFH LRNKF+C IVN+D LWSMV LGKG LPEN+PVVVKAKLVS T EKKIKEAG AVVLT +Y Sbjct: 39 MRYFHKLRNKFYCQIVNLDKLWSMV--------------------------LGKGFLPENKPVVVKAKLVSNTDEKKIKEAGSAVVLTFLLY 104
BLAST of EY675183 vs. ExPASy Swiss-Prot
Match: RL28_NEUCR (60S ribosomal protein L28 OS=Neurospora crassa GN=rpl-28 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 3.356e-18 Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 2 Query: 11 MRYFHTLRNKFHCPIVNVDTLWSMVPQEVKAK----ASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 277 MR+FH LRN PI+N++ LW++VP E + K A+ + P+ID+ GY K+LGKG LP+ P+VV+A+ VS AE+KIKEAGG + L A Sbjct: 58 MRHFHLLRNHQWAPILNIEKLWTLVPAEAREKYVSGAATETAPVIDLLSHGYAKLLGKGRLPQ-VPIVVRARYVSAEAERKIKEAGGVIELVA 149
BLAST of EY675183 vs. ExPASy Swiss-Prot
Match: RL27A_XENLA (60S ribosomal protein L27a OS=Xenopus laevis GN=rpl27a PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 4.384e-18 Identity = 45/92 (48.91%), Postives = 63/92 (68.48%), Query Frame = 2 Query: 11 MRYFHTLRNKFHCPIVNVDTLWSMVPQEVK---AKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 277 MR++H +N+ CP +N+D LW++V ++ + AK + P+ID GY+KVLGKG LP+ QPV+VKAK S+ AE+KIK GGA VL A Sbjct: 58 MRHYHLKKNQSFCPTINLDKLWTLVSEQTRLNHAKNLEGPAPIIDAVHAGYYKVLGKGKLPK-QPVIVKAKFFSRKAEEKIKSVGGACVLGA 148
BLAST of EY675183 vs. ExPASy Swiss-Prot
Match: RL28_YEAST (60S ribosomal protein L28 OS=Saccharomyces cerevisiae GN=RPL28 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 1.275e-17 Identity = 45/93 (48.39%), Postives = 64/93 (68.82%), Query Frame = 2 Query: 11 MRYFHTLRNKFHCPIVNVDTLWSMVPQEVKAK----ASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 277 MRYFH + F P++N+D LW+++P++ + + ASK+ P+ID GY K+LGKG +P N PV+VKA+ VSK AE+KI+ AGG V L A Sbjct: 58 MRYFHKQQAHFWKPVLNLDKLWTLIPEDKRDQYLKSASKETAPVIDTLAAGYGKILGKGRIP-NVPVIVKARFVSKLAEEKIRAAGGVVELIA 149 The following BLAST results are available for this feature:
BLAST of EY675183 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675183 ID=EY675183; Name=EY675183; organism=Citrus sinensis; type=EST; length=445bpback to top |