EY675168

Overview
NameEY675168
Unique NameEY675168
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1001
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675168 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.838e-31
Identity = 62/120 (51.67%), Postives = 78/120 (65.00%), Query Frame = 2
Query:    5 PIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 355
            PIRV+KNS      FP NQPM +Y++LW ADDWATRGGLEK DWSKAPF A Y+ F I+GC     A  C +    WW+   ++ L A + ++  WVR  + IY+YCTD+ RY   PPEC
Sbjct:  167 PIRVFKNSNDLGVKFPFNQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVNAKFCDTQGKRWWDQPEFRDLDAAQWQKLAWVRNKYTIYNYCTDRKRYSQVPPEC 286          
BLAST of EY675168 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.897e-30
Identity = 61/124 (49.19%), Postives = 80/124 (64.52%), Query Frame = 2
Query:    2 VPIRVYKNSGRAP----FPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGC--PVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 355
            VPIRVYKNS + P    FP  +PM ++S++W ADDWATRGGLEK DW KAPF + Y+DF +EGC    P PA  ++   NWW+  +   L+  +   Y WV+ N ++YDYC D  R+P  P EC
Sbjct:  163 VPIRVYKNSDKVPNNDFFPNQKPMYLFSSIWNADDWATRGGLEKTDWKKAPFVSSYKDFAVEGCRWKDPFPACVSTTTENWWDQYDAWHLSKTQKMDYAWVQRNLVVYDYCKDSERFPTLPWEC 286          
BLAST of EY675168 vs. ExPASy Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.184e-29
Identity = 57/121 (47.11%), Postives = 77/121 (63.64%), Query Frame = 2
Query:    2 VPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN---CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 355
            +PIRVYKN     +P ++PM V ++LW  DDWAT GG  K++WS +PF A++RDF + GC + G +N      +   WW A NYQ L+  E + Y  VR  +M YDYCTD+S+Y  PP EC
Sbjct:  170 IPIRVYKNENGVSYP-SKPMQVEASLWNGDDWATDGGRTKVNWSYSPFIAHFRDFALSGCNIDGRSNNVGACESSNYWWNAGNYQRLSGNEQKLYEHVRSKYMNYDYCTDRSKYQTPPREC 289          
BLAST of EY675168 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 2.076e-28
Identity = 59/122 (48.36%), Postives = 75/122 (61.48%), Query Frame = 2
Query:    5 PIRVYKNSGRA--PFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGP---ANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 355
            PIRV KN      PF  +Q MGVYS++W ADDWAT+GGL K DWS APF A Y++F I+ C +P     + C  +   WW+      L+  +  +  WVR NHMIYDYC D +R+PV P EC
Sbjct:  163 PIRVQKNLEEKGIPFAKDQAMGVYSSIWNADDWATQGGLVKTDWSHAPFVASYKEFQIDACEIPTTTDLSKCNGDQKFWWDEPTVSELSLHQNHQLIWVRANHMIYDYCFDATRFPVTPLEC 284          
BLAST of EY675168 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 5.114e-27
Identity = 58/122 (47.54%), Postives = 83/122 (68.03%), Query Frame = 2
Query:    2 VPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCP-VPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPV-PPPEC 355
            +PIR +KNS     PFP +QPM +Y++LWEA+ WATRGGLEK DWSKAPF A+YR+++++ C    G ++C++N  +W+     Q L      R +W +  +M+Y+YCTDK R+P   PPEC
Sbjct:  165 IPIREFKNSEALGVPFPKHQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDACVWSNGKSSCSAN-SSWFT----QVLDFKGKNRVKWAQRKYMVYNYCTDKKRFPQGAPPEC 281          
BLAST of EY675168 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 8.723e-27
Identity = 65/125 (52.00%), Postives = 78/125 (62.40%), Query Frame = 2
Query:    2 VPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPV-PGPANCASNPGNWW---EANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPEC 355
            VPIRV+ N+ +   PFP NQPM +YS+LW ADDWATRGGL K DWSKAPF AYYR F+   C V  G + C     + +   E+     L A   RR RWV+   MIYDYC+D  R+P   PPEC
Sbjct:  162 VPIRVFNNAEQLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAACTVSSGSSFCDPKFKSSFTNGESQVANELNAYGRRRLRWVQKYFMIYDYCSDLKRFPQGFPPEC 286          
BLAST of EY675168 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 9.645e-26
Identity = 60/122 (49.18%), Postives = 81/122 (66.39%), Query Frame = 2
Query:    2 VPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCP-VPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYP-VPPPEC 355
            +PIR + N  S   PFP  QPM +Y++LWEA+ WATRGGLEK DWSKAPF AYYR++++EGC  V G + C +N   W+     Q L +    R + V+  +M+Y+YC+DK R+P   PPEC
Sbjct:  160 IPIREFMNAESRGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAYYRNYNVEGCVWVNGKSVCPAN-SQWFT----QKLDSNGQTRMKGVQSKYMVYNYCSDKKRFPRGVPPEC 276          
BLAST of EY675168 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.260e-25
Identity = 66/121 (54.55%), Postives = 77/121 (63.64%), Query Frame = 2
Query:    5 PIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFD-IEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPEC 355
            PIRV+KN+     PFP NQPM +YS+LW ADDWATRGGL K DWSKAPF AYYR+F  IE        +  SN G  +EAN    L A   RR RWV+   MIY+YC+D  R+P   P EC
Sbjct:  168 PIRVFKNAEPLGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKAIEF----SSKSSISNSGAEYEANE---LDAYSRRRLRWVQKYFMIYNYCSDLKRFPQGLPAEC 281          
BLAST of EY675168 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.665e-25
Identity = 63/129 (48.84%), Postives = 76/129 (58.91%), Query Frame = 2
Query:    5 PIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGC-------PVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPECLA 361
            PIR +KN  S    FP N+PM +YS+LW ADDWATRGGL K DWSKAPF A YR F  E C         P  +   +  G+W      Q L +   +R RWV+ N+MIY+YCTD  R+P   P ECLA
Sbjct:  159 PIREFKNMESLGTLFPKNKPMRMYSSLWNADDWATRGGLVKTDWSKAPFTASYRGFQQEACVWSNGKSSCPNASKQGTTTGSWLS----QELDSTAQQRMRWVQRNYMIYNYCTDAKRFPQGLPKECLA 283          
BLAST of EY675168 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.787e-25
Identity = 60/124 (48.39%), Postives = 76/124 (61.29%), Query Frame = 2
Query:    2 VPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEA---RRYRWVRLNHMIYDYCTDKSRYPVP-PPEC 355
            +PIRV+ N+ +   PFP +QPM +YS+LW ADDWATRGGL K DWSKAPF AYYR F+   C     + C     + +     Q  T + A   RR RWV+   MIY+YC+D  R+P   PPEC
Sbjct:  163 LPIRVFNNAEKLGVPFPKSQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAAC--TASSGCDPKFKSSFGDGKLQVATELNAYGRRRLRWVQKYFMIYNYCSDLKRFPRGFPPEC 284          
The following BLAST results are available for this feature:
BLAST of EY675168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
XTHA_PHAAN5.838e-3151.67Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH8_ARATH2.897e-3049.19Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH3_ARATH4.184e-2947.11Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH9_ARATH2.076e-2848.36Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH20_ARATH5.114e-2747.54Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH16_ARATH8.723e-2752.00Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH19_ARATH9.645e-2649.18Probable xyloglucan endotransglucosylase/hydrolase... [more]
BRU1_SOYBN1.260e-2554.55Brassinosteroid-regulated protein BRU1 OS=Glycine ... [more]
XTH22_ARATH3.665e-2548.84Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH15_ARATH4.787e-2548.39Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-007-A09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675168 ID=EY675168; Name=EY675168; organism=Citrus sinensis; type=EST; length=1001bp
TGTGCCCATCAGGGTTTACAAAAACAGTGGAAGGGCTCCATTTCCAATGA
ACCAACCCATGGGGGTGTATTCGACGCTGTGGGAAGCAGATGACTGGGCA
ACAAGAGGTGGTCTAGAGAAAATAGATTGGAGCAAAGCTCCTTTTTATGC
TTATTACAGAGACTTTGATATTGAGGGCTGCCCAGTTCCTGGACCAGCAA
ACTGTGCCTCGAACCCAGGTAACTGGTGGGAGGCAAATAATTATCAAGCC
CTCACCGCCATGGAAGCAAGAAGATACAGATGGGTTCGTCTCAACCACAT
GATCTATGATTATTGCACTGATAAATCAAGATACCCAGTACCCCCACCGG
AATGCCTTGCCGGCATATAAATTCAACCCGCCAATTAATTAAGCAGTTGG
ACGGTACTCCATATCCGTATCATATCATGTATATTACTTCACGTACACGT
CCTTTGTATTATTCCCTATTCGTGTGAAAAGACTTATACGCATATCAAGG
GAGGGGCAGGAGGGAAAATAAACATTGTGTGCTTTTAAATGTGATTATGG
GAGTGGGAAATATGTGGGGTATCTGCTCCGCTTGTACCATATATAAGTCT
GAATTTGATGCACAGTATTCTGTGCCAATAAAAGCCTCTTCTTAATTGTG
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAN
NAAAAAAAAAAGANAAAGAAAAAAAAAAAAANNNANGAAAAAGAAAAAAN
AAAAANGGGGGGGGGGGGCCCCCCCAAAAGGAAACCACATTTTTCCACCC
CCGGGGGCGGGGGCCGCCCCCCATCCCTTCTTCTTTGTGGGGCCCCCAAT
AATTTTTTTTTTCCCGGGGGGCCGCGTTTTTTTATAAACCCCCGGGGGGG
GGGGGGGGGAGAAAAAACCCGTGGGGGGTTTTCCCCCCCAAAATATTATT
ATCTCCCCCTCTTTGGGGTGCCCAACCCCCCCCCCCCCCCTCTTTTTTTG
T
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