EY675164

Overview
NameEY675164
Unique NameEY675164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: PEL6_ARATH (Probable pectate lyase 6 OS=Arabidopsis thaliana GN=At2g02720 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 4.271e-53
Identity = 109/249 (43.78%), Postives = 149/249 (59.84%), Query Frame = 3
Query:   12 RNAIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITIFKQ---SHDPPQ*GYAAGSQ*FLHQGQAN-ASNHCLQPFWXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPGEKKNKGPIE 746
            R   G ++G  YVVTDP D+D + PKPGT+RHAV +D+PLWI+F R M+I+L+QELI+ + KTIDGRGA ++I  G  +T+QFV NVIIH +H+   K     ++  S  H+G RTV+DGD I+IFG++++WIDH S++ C+DG++DA+MGSTAITI       HD               + Q   A NH     +                 VV+NDYT WE  A+GG   PT+   G +    PIE
Sbjct:  129 RKTTGGKNGPIYVVTDPSDNDLLKPKPGTIRHAVTRDRPLWIIFARSMIIKLQQELIITNDKTIDGRGAKIYITGGAGLTLQFVRNVIIHNIHIKQIKRGAGGLIIDSEQHFGLRTVSDGDGINIFGATNVWIDHVSMTDCSDGMIDAIMGSTAITISNSHFTDHDEVMLFGGTNKDVIDKKMQITVAFNH-----FGKRLKQRMPRVRFGLVHVVNNDYTHWEMYAIGGNMNPTIISQGNRFIAPPIE 372          
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: PEL16_ARATH (Probable pectate lyase 16 OS=Arabidopsis thaliana GN=At4g22080 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 3.616e-52
Identity = 121/261 (46.36%), Postives = 150/261 (57.47%), Query Frame = 3
Query:   15 NAIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITI----FKQSHDPPQ*GYAAGSQ*FLHQGQANASNHCLQPFWXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPG------EKKNKGPIECPFPKGG 767
            + +G + G  YVVT+P D+   NP+PG+LR+ VIQ KPLWI F +DMVI L+ EL+VNS+KTIDGRGA V IA G CITIQ VTNVI+HG+ +HDCKP    MVRSSPTH G R  +DGDAI+IFGSS+IWIDH  L+ C DGL+D +  ST ITI    F Q       G+       +      A NH     +              Y  V +N Y  W   A+GG A PT+   G      +K N   +     KGG
Sbjct:   76 STLGGKKGNLYVVTNPYDNAQ-NPQPGSLRYGVIQAKPLWITFAKDMVITLENELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIVHGISIHDCKPGKYGMVRSSPTHVGHRKGSDGDAIAIFGSSNIWIDHCYLASCTDGLIDVIHASTGITISNNYFTQHDKVMLLGHNDDFVQDVKMKVTVAFNH-----FGPGLVERMPRVRRGYAHVANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSNSKEVTKREVKGG 330          
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: PEL17_ARATH (Putative pectate lyase 17 OS=Arabidopsis thaliana GN=At4g22090 PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.374e-51
Identity = 115/239 (48.12%), Postives = 142/239 (59.41%), Query Frame = 3
Query:   15 NAIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITI----FKQSHDPPQ*GYAAGSQ*FLHQGQANASNHCLQPFWXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPG 719
            + +G + G  YVVT+P D+   NP PG+LR+ VIQ KPLWI F +DMVI L  EL+VNS+KTIDGRGA V IA G CITIQ VTNVI+HG+ +HDCKP  +  VRSSPTH G R  +DGDAI+IFGSS++WIDH  L+ C DGL+D +  STAITI    F Q       G+       +      A NH     +              Y  V +N Y  W   A+GG A PT+   G
Sbjct:   76 STLGGKKGNIYVVTNPYDNAQ-NPHPGSLRYGVIQAKPLWITFAKDMVITLANELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIVHGISIHDCKPGKSGKVRSSPTHVGHRKGSDGDAITIFGSSNVWIDHCYLASCTDGLIDVIHASTAITISNNYFTQHDKVMLLGHNDNFVKDVKMKVTVAFNH-----FGPGLVERMPRVRRGYAHVANNRYDKWIMYAIGGSADPTIFSEG 308          
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: PEL3_ARATH (Probable pectate lyase 3 OS=Arabidopsis thaliana GN=AT59 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.998e-51
Identity = 106/240 (44.17%), Postives = 142/240 (59.17%), Query Frame = 3
Query:   12 RNAIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITIFKQSHDPPQ*GYAAGSQ*FLHQGQANASNHCLQPFWXXXXXXXXXXXXXXY--FLVVDNDYTPWEKDALGGRATPTLQQPGEK 725
            R   G +DG  YVV D  D+D +NPKPGTLRHAV +D PLWI+F R M+I+L+QEL++ S KTIDGRGA V+I  G  +T+QFV NVIIH ++V    P    ++R S  H G RT +DGD IS+FG+++IWIDH S++ CADG++DA+ GSTA+TI        Q     G++    +   +        F               Y    VV+NDYT WE  A+GG   PT+   G +
Sbjct:  133 RRTTGGKDGPIYVVKDASDNDLINPKPGTLRHAVTRDGPLWIIFARSMIIKLQQELMITSDKTIDGRGARVYIMEGAGLTLQFVNNVIIHNIYVKHIVPGNGGLIRDSEAHIGLRTKSDGDGISLFGATNIWIDHVSMTRCADGMIDAIDGSTAVTISNSHFTDHQEVMLFGAR---DEHVIDKKMQITVAFNHFGKRLEQRMPRCRYGTIHVVNNDYTHWEMYAIGGNMNPTIISQGNR 369          
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: PEL56_SOLLC (Probable pectate lyase P56 OS=Solanum lycopersicum GN=LAT56 PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 2.681e-47
Identity = 109/241 (45.23%), Postives = 138/241 (57.26%), Query Frame = 3
Query:   15 NAIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITIFKQSHDPPQ*GYAAGSQ*FLHQGQAN----ASNHCLQPFWXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPGEK 725
            NA+G + G +Y+VTD  DDD V+PKPGTLR  VIQ  PLWI F R M I+L +ELIV+S KTIDGRG  VHIANG  I IQ  +NVII  L +H+  PT   ++R S  H G R   +GDAISIF S  IWIDH S+S   DGL+DAV GST ITI        +     G+     + +      A NH     +              +F +V+NDYT WE+ A+GG +  T+   G +
Sbjct:   76 NAMGGKYGPYYIVTDNSDDDVVDPKPGTLRFGVIQKGPLWITFARSMRIRLTRELIVSSNKTIDGRGKYVHIANGAGIKIQSASNVIISNLRIHNIVPTAGGLLRESDDHLGLRGADEGDAISIFNSHDIWIDHISMSRATDGLIDAVAGSTNITISNCHFTDHEKVMLFGANDHAEEDRGMKITLAYNH-----FGKRLDQRMPRCRFGFFHLVNNDYTHWERYAIGGSSGATIISQGNR 311          
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: PEL_TOBAC (Pectate lyase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 4.574e-47
Identity = 110/242 (45.45%), Postives = 140/242 (57.85%), Query Frame = 3
Query:   15 NAIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITIFK---QSHDPPQ*GYAAGSQ*FLHQGQ--ANASNHCLQPFWXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPGEK 725
            NAIG + GR YVVTD  DDD V+PKPGTLR+ VIQ +PLWI+F ++M I+L +ELIV S KTIDGRG NVHI NG  I IQ  +N+II  L +H+  PT   ++R S  H G R   +GD ISIF S  IWIDH S+S   DGL+DAV  ST ITI       H+     + A     L +      A NH     +              +F +V+NDYT WE+ A+GG +  T+   G +
Sbjct:   75 NAIGGKLGRIYVVTDNSDDDVVDPKPGTLRYGVIQKEPLWIIFGKNMKIKLSRELIVTSNKTIDGRGFNVHIQNGAGIKIQSASNIIISNLRIHNIVPTPGGLLRESEDHVGLRGSDEGDGISIFSSHDIWIDHISMSRATDGLIDAVAASTNITISNCHFTDHEKVM-LFGANDHYVLDKDMKITLAYNH-----FGKRLDQRMPRCRFGFFHLVNNDYTHWERYAIGGSSGATIISQGNR 310          
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: PEL21_ARATH (Putative pectate lyase 21 OS=Arabidopsis thaliana GN=At5g55720 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 4.574e-47
Identity = 107/240 (44.58%), Postives = 142/240 (59.17%), Query Frame = 3
Query:   12 RNAIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITI---FKQSHDPPQ-*GYAAGSQ*FLHQGQANASNHCLQPFWXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPG 719
            R++IG R G FY VTD  DD+P+NP PGTLR+A  QD+PLWI+F RDMVIQLKQ+L V S+KTIDGRG NV IA G C+T+  V+N+II+ L++HDC P     + S   +      +DGD ISIF S  IWIDH +L  C DGL+DAV GST ITI   +  +H+     G++       + G  +        ++              YF +V+N Y  W+  A+GG A PT+   G
Sbjct:   77 RDSIGGRAGEFYTVTDSGDDNPLNPTPGTLRYAATQDQPLWIIFDRDMVIQLKQDLQVASYKTIDGRGNNVQIAYGPCLTLYKVSNIIINNLYIHDCVPVKRNALSSLGGY------SDGDGISIFESRDIWIDHCTLEKCYDGLIDAVNGSTDITISNSYMLNHNEVMLLGHSDE-----YSGDRDMRVTIAFNYFGEGLVQRMPRCRHGYFHIVNNIYRDWKMYAIGGSANPTIFSQG 305          
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: PEL4_ARATH (Probable pectate lyase 4 OS=Arabidopsis thaliana GN=At1g30350 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.799e-43
Identity = 110/282 (39.01%), Postives = 143/282 (50.71%), Query Frame = 3
Query:   18 AIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITI----FKQSHDPPQ*GYAAGSQ*FLHQGQANASNHCLQPFWXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPG------EKKNKGPIECPFPKGGKKKRGETNWQPPWERGGKRGNF 833
            AIG ++G  YVVT+P  D+P  P PGTLR+AV Q KPLWI F RDMVI LK +L++NS+KTIDGRGA V IANG C+ I+ V +VIIHG+ +HDCK   N M              DGD I +F S+H+WIDH  LS C DGL+D ++ STA+TI    F Q       G+        + G  +         +              Y  V +N Y  W+  A+GG A P +   G      EK++   +      G   KR        W+ G  R  F
Sbjct:   66 AIGGKNGPIYVVTNP-SDNPTRPSPGTLRYAVSQPKPLWITFARDMVIVLKSQLMINSYKTIDGRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNGM--------------DGDGIRVFQSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDS-----YMGDKDMRVTIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNYFVAPEKRSSKQVTKRMMAGPDSKR--------WKWGTSRDVF 319          
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: MPA11_AMBAR (Pollen allergen Amb a 1.1 OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.799e-43
Identity = 99/238 (41.60%), Postives = 134/238 (56.30%), Query Frame = 3
Query:   12 RNAIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITIFKQSHDPPQ*GYAAGSQ*FLHQGQANASNHCLQPFWXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPGEK 725
            +  +G +DG  Y VT   DDD  NPK GTLR    Q++PLWI+F+RDMVI+L +E++VNS KTIDGRGA V I N G  T+  V NVIIH +++HD K     +++S+      R  +DGDAISI GSS IWIDH SLS   DGLVDA +G+T +T+        Q     G+     + +   +      F               +F VV+N+Y  W   A+GG A+PT+   G +
Sbjct:   76 KGTVGGKDGDIYTVTSELDDDVANPKEGTLRFGAAQNRPLWIIFERDMVIRLDKEMVVNSDKTIDGRGAKVEIINAG-FTLNGVKNVIIHNINMHDVKVNPGGLIKSNDGPAAPRAGSDGDAISISGSSQIWIDHCSLSKSVDGLVDAKLGTTRLTVSNSLFTQHQFVLLFGAGDENIEDRGMLATVAFNTF-TDNVDQRMPRCRHGFFQVVNNNYDKWGSYAIGGSASPTILSQGNR 311          
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: MPA12_AMBAR (Pollen allergen Amb a 1.2 OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 5.233e-43
Identity = 96/238 (40.34%), Postives = 134/238 (56.30%), Query Frame = 3
Query:   12 RNAIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITIFKQSHDPPQ*GYAAGSQ*FLHQGQANASNHCLQPFWXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPGEK 725
            +   G + G  Y VT  +DDD  NPK GTLR A  Q++PLWI+FKR+MVI L QEL+VNS KTIDGRG  V+I N G +T+  V N+IIH +++HD K     M++S+      R  +DGDAI++ GSS IWIDH SLS  +DGL+D  +GS+ +T+        Q     G+    +Q +   +      F               +F VV+N+Y  W   A+GG + PT+   G +
Sbjct:   78 KGTYGGKHGDVYTVTSDKDDDVANPKEGTLRFAAAQNRPLWIIFKRNMVIHLNQELVVNSDKTIDGRGVKVNIVNAG-LTLMNVKNIIIHNINIHDIKVCPGGMIKSNDGPPILRQQSDGDAINVAGSSQIWIDHCSLSKASDGLLDITLGSSHVTVSNCKFTQHQFVLLLGADDTHYQDKGMLATVAFNMF-TDHVDQRMPRCRFGFFQVVNNNYDRWGTYAIGGSSAPTILSQGNR 313          
The following BLAST results are available for this feature:
BLAST of EY675164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
PEL6_ARATH4.271e-5343.78Probable pectate lyase 6 OS=Arabidopsis thaliana G... [more]
PEL16_ARATH3.616e-5246.36Probable pectate lyase 16 OS=Arabidopsis thaliana ... [more]
PEL17_ARATH1.374e-5148.12Putative pectate lyase 17 OS=Arabidopsis thaliana ... [more]
PEL3_ARATH3.998e-5144.17Probable pectate lyase 3 OS=Arabidopsis thaliana G... [more]
PEL56_SOLLC2.681e-4745.23Probable pectate lyase P56 OS=Solanum lycopersicum... [more]
PEL_TOBAC4.574e-4745.45Pectate lyase OS=Nicotiana tabacum PE=2 SV=1[more]
PEL21_ARATH4.574e-4744.58Putative pectate lyase 21 OS=Arabidopsis thaliana ... [more]
PEL4_ARATH1.799e-4339.01Probable pectate lyase 4 OS=Arabidopsis thaliana G... [more]
MPA11_AMBAR1.799e-4341.60Pollen allergen Amb a 1.1 OS=Ambrosia artemisiifol... [more]
MPA12_AMBAR5.233e-4340.34Pollen allergen Amb a 1.2 OS=Ambrosia artemisiifol... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-007-A05-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675164 ID=EY675164; Name=EY675164; organism=Citrus sinensis; type=EST; length=1026bp
CCACGCGTCCGAGAAATGCCATTGGTCGCCGTGATGGTCGCTTCTATGTT
GTCACTGACCCAAGGGATGATGACCCTGTTAACCCCAAACCTGGAACTTT
ACGCCATGCTGTTATCCAGGATAAGCCTCTCTGGATTGTTTTCAAGAGGG
ACATGGTGATTCAATTGAAACAGGAACTGATTGTCAATAGCTTCAAGACC
ATTGATGGTCGTGGGGCGAATGTGCACATTGCTAATGGAGGTTGCATCAC
TATCCAATTTGTGACCAATGTGATCATTCACGGTCTTCACGTTCATGACT
GTAAACCCACTGGTAATGCCATGGTTAGGAGCTCACCGACTCACTATGGG
TGGAGGACAGTGGCTGATGGTGATGCCATATCAATTTTTGGCTCTAGCCA
TATATGGATTGATCACAATTCACTCTCCCATTGTGCTGATGGACTTGTTG
ATGCCGTCATGGGATCTACTGCCATTACCATTTTCAAACAATCACATGAC
CCACCACAATGAGGTTATGCTGCTGGGTCACAGTGATTCCTACACCAGGG
ACAAGCAAATGCAAGTAACCATTGCTTACAACCATTTTGGAAAGGGAATC
ATTCAAAAAATGGCAAGGGGGGAAAACTTGGTTATTTCCTTGTGGTGGAC
AATGACTACACTCCCTGGGAAAAGGATGCCCTTGGTGGAAGGGCAACCCC
CACCCTCCAACAGCCCGGGGAAAAAAAAAACAAGGGCCCCATTGAATGCC
CTTTCCCAAAGGGAGGAAAAAAAAAAAGGGGGGAAACAAACTGGCAACCC
CCGTGGGAAAGGGGGGGGAAACGGGGAAATTTTAAAAGGAAAACCCTTTT
GGGGGGAAAGGGGGGGCCCCACTTTTTCCCCCCCCCCCCGGGAAAAACGG
GAACCCCCCCCACCTTTTATATTTTGCCCCCGGGGGGTTTTCTAAAGCTT
TGTGGGGGGAACACACAAAACTCTTTTCTCCCCCCCCCCGCGGGGGGGTG
GGGTGGGGACATCCCCAATTATATAT
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