EY675164

Overview
NameEY675164
Unique NameEY675164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: MPA13_AMBAR (Pollen allergen Amb a 1.3 OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 7.557e-42
Identity = 98/238 (41.18%), Postives = 128/238 (53.78%), Query Frame = 3
Query:   12 RNAIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITIFKQSHDPPQ*GYAAGSQ*FLHQGQANASNHCLQPFWXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPGEK 725
            +   G + G  Y VT   DDD  NPK GTLR A  Q++PLWI+FK DMVI L QEL+VNS KTIDGRG  V I NGG +T+  V N+IIH +++HD K     M++S+      R  +DGD I++ GSS IWIDH SLS   DGLVD  +GST +TI              G+     Q +   +      F               +F VV+N+Y  W   A+GG + PT+   G +
Sbjct:   77 KGTYGGKWGDVYTVTSNLDDDVANPKEGTLRFAAAQNRPLWIIFKNDMVINLNQELVVNSDKTIDGRGVKVEIINGG-LTLMNVKNIIIHNINIHDVKVLPGGMIKSNDGPPILRQASDGDTINVAGSSQIWIDHCSLSKSFDGLVDVTLGSTHVTISNCKFTQQSKAILLGADDTHVQDKGMLATVAFNMF-TDNVDQRMPRCRFGFFQVVNNNYDRWGTYAIGGSSAPTILCQGNR 312          
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: MPAA2_AMBAR (Pollen allergen Amb a 2 OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 5.415e-40
Identity = 95/234 (40.60%), Postives = 127/234 (54.27%), Query Frame = 3
Query:   24 GRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITIFKQSHDPPQ*GYAAGSQ*FLHQGQANASNHCLQPFWXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPGEK 725
            G + G  Y+VT  +DDD VNPK GTLR    QD+PLWI+F+RDM+I L+QE++V S KTIDGRGA V +  GG IT+  V NVIIH + +HD +      ++S+      R  +DGDAI + GSS IWIDH +LS   DGLVD   GST +TI        +     G+    H              +              +F +V+N Y  W+K A+GG + PT+   G K
Sbjct:   81 GGKWGDIYMVTSDQDDDVVNPKEGTLRFGATQDRPLWIIFQRDMIIYLQQEMVVTSDKTIDGRGAKVELVYGG-ITLMNVKNVIIHNIDIHDVRVLPGGRIKSNGGPAIPRHQSDGDAIHVTGSSDIWIDHCTLSKSFDGLVDVNWGSTGVTISNCKFTHHEKAVLLGAS-DTHFQDLKMHVTLAYNIFTNTVHERMPRCRFGFFQIVNNFYDRWDKYAIGGSSNPTILSQGNK 312          
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: MPAJ1_JUNVI (Major pollen allergen Jun v 1 OS=Juniperus virginiana PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.881e-38
Identity = 93/242 (38.43%), Postives = 130/242 (53.72%), Query Frame = 3
Query:   15 NAIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGG-CITIQFVTNVIIHGLHVHDCKPT--GNAMVRSS----PTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITIFKQSHDPPQ*GYAAGSQ*FLHQGQANASNHCLQPFWXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPG 719
            + +G + G FY VT   DD+PVNP PGTLR+   ++K LWI+F ++M I+LK  L V   KTIDGRGA+VH+ NGG C+ ++ V++VI+HGLH+H C  +  G+ +V  S    P H       DGDAI++   ++ WIDHNSLS C+DGL+D  +GST ITI              G        ++         F                  V +N+Y PW   A+GG + PT+   G
Sbjct:   52 STMGGKGGDFYTVTSA-DDNPVNPTPGTLRYGATREKTLWIIFSQNMNIKLKMPLYVAGHKTIDGRGADVHLGNGGPCLFMRKVSHVILHGLHIHGCNTSVLGDVLVSESIGVVPVH-----AQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVH-VANNNYDPWNIYAIGGSSNPTILSEG 286          
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: MPAJ1_JUNAS (Major pollen allergen Jun a 1 OS=Juniperus ashei PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.926e-37
Identity = 92/242 (38.02%), Postives = 129/242 (53.31%), Query Frame = 3
Query:   15 NAIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGG-CITIQFVTNVIIHGLHVHDCKPT--GNAMVRSS----PTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITIFKQSHDPPQ*GYAAGSQ*FLHQGQANASNHCLQPFWXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPG 719
            + +G + G FY VT   DD+PVNP PGTLR+   ++K LWI+F ++M I+LK  L V   KTIDGRGA+VH+ NGG C+ ++ V++VI+H LH+H C  +  G+ +V  S    P H       DGDAI++   ++ WIDHNSLS C+DGL+D  +GST ITI              G        ++         F                  V +N+Y PW   A+GG + PT+   G
Sbjct:   52 STMGGKGGDFYTVTST-DDNPVNPTPGTLRYGATREKALWIIFSQNMNIKLKMPLYVAGHKTIDGRGADVHLGNGGPCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVH-----AQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVH-VANNNYDPWNIYAIGGSSNPTILSEG 286          
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: MPA14_AMBAR (Pollen allergen Amb a 1.4 OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 3.285e-37
Identity = 98/240 (40.83%), Postives = 123/240 (51.25%), Query Frame = 3
Query:   12 RNAIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITIFKQSHDPPQ*GYAAGSQ*FLHQGQANASNHCLQPF--WXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPGEK 725
            +  IG +DG  Y VT   DDD  NPK GTLR    Q++PLWI+F RDMVI+L +EL +N+ KTIDGRGA V I N G   I  V N+IIH + +HD       +++S       R  +DGDAI I G S IWIDH SLS   DGL+DA  GST  T+        Q  Y      F  +G       C   F  +              +  VV+N+Y  W   ALGG A PT+   G +
Sbjct:   77 KGTIGGKDGDIYTVTSELDDDVANPKEGTLRFGAAQNRPLWIIFARDMVIRLDRELAINNDKTIDGRGAKVEIINAG-FAIYNVKNIIIHNIIMHDIVVNPGGLIKSHDGPPVPRKGSDGDAIGISGGSQIWIDHCSLSKAVDGLIDAKHGSTHFTVSNCLFTQHQ--YLLLFWDFDERGML-----CTVAFNKFTDNVDQRMPNLRHGFVQVVNNNYERWGSYALGGSAGPTILSQGNR 308          
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: SBP_CRYJA (Sugi basic protein OS=Cryptomeria japonica PE=1 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 4.291e-37
Identity = 95/248 (38.31%), Postives = 134/248 (54.03%), Query Frame = 3
Query:   15 NAIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGG-CITIQFVTNVIIHGLHVHDCKPT--GNAMVRSS----PTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITI----FKQSHDPPQ*GYAAGSQ*FLHQGQANASNHCLQPFWXXXXXXXXXXXXXXYFL--VVDNDYTPWEKDALGGRATPTLQQPG 719
            + +G + G  Y VT+  DDDPVNP PGTLR+   +D+PLWI+F  +M I+LK  + +  +KT DGRGA V+I NGG C+ I+ V+NVIIHGLH++ C  +  GN ++  S    P H       DGDA+++  +++IWIDHNS S+ +DGLVD  + ST +TI    F   H     G+             + S      F               Y L  V +N+Y PW   A+GG + PT+   G
Sbjct:   52 STMGGKGGDLYTVTNS-DDDPVNPAPGTLRYGATRDRPLWIIFSGNMNIKLKMPMYIAGYKTFDGRGAQVYIGNGGPCVFIKRVSNVIIHGLHLYGCSTSVLGNVLINESFGVEPVH-----PQDGDALTLRTATNIWIDHNSFSNSSDGLVDVTLSSTGVTISNNLFFNHHKVMLLGHDDAY-------SDDKSMKVTVAFNQFGPNCGQRMPRARYGLVHVANNNYDPWTIYAIGGSSNPTILSEG 286          
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: MPAC1_CHAOB (Major pollen allergen Cha o 1 OS=Chamaecyparis obtusa PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 6.196e-36
Identity = 88/242 (36.36%), Postives = 127/242 (52.48%), Query Frame = 3
Query:   15 NAIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGG-CITIQFVTNVIIHGLHVHDCKP--TGNAMVRSS----PTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITIFKQSHDPPQ*GYAAGSQ*FLHQGQANASNHCLQPFWXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPG 719
            +A+G + G FY VT   DDDPVNP PGTLR+   +++ LWI+F +++ I+L   L +   KTIDGRGA VHI NGG C+ ++ V++VI+HGL++H C    +GN ++  +    P H       DGDAI++   + +WIDHNSLS  +DGLVD  + ST +TI              G        ++         F                  V +N+Y PW   A+GG + PT+   G
Sbjct:   52 SAMGGKGGAFYTVTSS-DDDPVNPAPGTLRYGATRERSLWIIFSKNLNIKLNMPLYIAGNKTIDGRGAEVHIGNGGPCLFMRTVSHVILHGLNIHGCNTSVSGNVLISEASGVVPVH-----AQDGDAITMRNVTDVWIDHNSLSDSSDGLVDVTLASTGVTISNNHFFNHHKVMLLGHSDIYSDDKSMKVTVAFNQF-GPNAGQRMPRARYGLIHVANNNYDPWSIYAIGGSSNPTILSEG 286          
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: MPAC1_CUPAR (Major pollen allergen Cup a 1 OS=Cupressus arizonica PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 2.354e-35
Identity = 88/242 (36.36%), Postives = 127/242 (52.48%), Query Frame = 3
Query:   15 NAIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGG-CITIQFVTNVIIHGLHVHDCKPT--GNAMVRSS----PTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITIFKQSHDPPQ*GYAAGSQ*FLHQGQANASNHCLQPFWXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPG 719
            + +G + G  Y VT   +D+PVNP PGTLR+   ++K LWI+F ++M I+L+  L V  +KTIDGRGA VH+ NGG C+ ++  ++VI+HGLH+H C  +  G+ +V  S    P H       DGDAI++   ++ WIDHNSLS C+DGL+D  +GST ITI              G        ++         F                  V +N+Y  W   A+GG + PT+   G
Sbjct:   31 STMGGKGGEIYTVTSS-EDNPVNPTPGTLRYGATREKALWIIFSQNMNIKLQMPLYVAGYKTIDGRGAVVHLGNGGPCLFMRKASHVILHGLHIHGCNTSVLGDVLVSESIGVEPVH-----AQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVH-VANNNYDQWNIYAIGGSSNPTILSEG 265          
The following BLAST results are available for this feature:
BLAST of EY675164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
MPA13_AMBAR7.557e-4241.18Pollen allergen Amb a 1.3 OS=Ambrosia artemisiifol... [more]
MPAA2_AMBAR5.415e-4040.60Pollen allergen Amb a 2 OS=Ambrosia artemisiifolia... [more]
MPAJ1_JUNVI3.881e-3838.43Major pollen allergen Jun v 1 OS=Juniperus virgini... [more]
MPAJ1_JUNAS1.926e-3738.02Major pollen allergen Jun a 1 OS=Juniperus ashei P... [more]
MPA14_AMBAR3.285e-3740.83Pollen allergen Amb a 1.4 OS=Ambrosia artemisiifol... [more]
SBP_CRYJA4.291e-3738.31Sugi basic protein OS=Cryptomeria japonica PE=1 SV... [more]
MPAC1_CHAOB6.196e-3636.36Major pollen allergen Cha o 1 OS=Chamaecyparis obt... [more]
MPAC1_CUPAR2.354e-3536.36Major pollen allergen Cup a 1 OS=Cupressus arizoni... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-007-A05-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675164 ID=EY675164; Name=EY675164; organism=Citrus sinensis; type=EST; length=1026bp
CCACGCGTCCGAGAAATGCCATTGGTCGCCGTGATGGTCGCTTCTATGTT
GTCACTGACCCAAGGGATGATGACCCTGTTAACCCCAAACCTGGAACTTT
ACGCCATGCTGTTATCCAGGATAAGCCTCTCTGGATTGTTTTCAAGAGGG
ACATGGTGATTCAATTGAAACAGGAACTGATTGTCAATAGCTTCAAGACC
ATTGATGGTCGTGGGGCGAATGTGCACATTGCTAATGGAGGTTGCATCAC
TATCCAATTTGTGACCAATGTGATCATTCACGGTCTTCACGTTCATGACT
GTAAACCCACTGGTAATGCCATGGTTAGGAGCTCACCGACTCACTATGGG
TGGAGGACAGTGGCTGATGGTGATGCCATATCAATTTTTGGCTCTAGCCA
TATATGGATTGATCACAATTCACTCTCCCATTGTGCTGATGGACTTGTTG
ATGCCGTCATGGGATCTACTGCCATTACCATTTTCAAACAATCACATGAC
CCACCACAATGAGGTTATGCTGCTGGGTCACAGTGATTCCTACACCAGGG
ACAAGCAAATGCAAGTAACCATTGCTTACAACCATTTTGGAAAGGGAATC
ATTCAAAAAATGGCAAGGGGGGAAAACTTGGTTATTTCCTTGTGGTGGAC
AATGACTACACTCCCTGGGAAAAGGATGCCCTTGGTGGAAGGGCAACCCC
CACCCTCCAACAGCCCGGGGAAAAAAAAAACAAGGGCCCCATTGAATGCC
CTTTCCCAAAGGGAGGAAAAAAAAAAAGGGGGGAAACAAACTGGCAACCC
CCGTGGGAAAGGGGGGGGAAACGGGGAAATTTTAAAAGGAAAACCCTTTT
GGGGGGAAAGGGGGGGCCCCACTTTTTCCCCCCCCCCCCGGGAAAAACGG
GAACCCCCCCCACCTTTTATATTTTGCCCCCGGGGGGTTTTCTAAAGCTT
TGTGGGGGGAACACACAAAACTCTTTTCTCCCCCCCCCCGCGGGGGGGTG
GGGTGGGGACATCCCCAATTATATAT
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