EY656642
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB2_PYRKO (Tryptophan synthase beta chain 2 OS=Pyrococcus kodakaraensis GN=trpB2 PE=3 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 3.667e-77 Identity = 144/259 (55.60%), Postives = 183/259 (70.66%), Query Frame = 2 Query: 8 SALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTKYCLGSVLNHVLLHQTVIGEECIKQMEAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR*ALRCK 784 +AL+ + +L GLN V+ RASY QKPYR+ +M+ +GA+++PSPSD TE GRK L DP+ PG LGIAISEA E + +Y LGSVLNHVL+HQTVIG E +QM+ E PD+IIGC GGGSNF GL++PF+R+ L G+ AVEP A PS+T+GVY YD+GD+ G TP MKMHTLGH + PIHAGGLRYHG+AP LS + +++ ++ Q E FQ A FA+TEGI+PA E+ HAI I AL K Sbjct: 140 TALSLAGALLGLNVRVYMARASYQQKPYRKTIMRLYGAEIYPSPSDRTEIGRKFLAEDPNHPGGLGIAISEAIEDVLRDEKARYALGSVLNHVLMHQTVIGLEAQEQMKEF-EEPDVIIGCVGGGSNFAGLAYPFVRDVLKGEAEYEFIAVEPKAAPSMTRGVYKYDYGDSGGYTPKMKMHTLGHTYYVPPIHAGGLRYHGLAPTLSVLINHGIVKPVAYHQNEVFQAAHLFAKTEGIVPAPESAHAIKGAIDRALEAK 397
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB2_AERPE (Tryptophan synthase beta chain 2 OS=Aeropyrum pernix GN=trpB2 PE=3 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 6.256e-77 Identity = 146/261 (55.94%), Postives = 187/261 (71.65%), Query Frame = 2 Query: 8 SALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAE-VAATNADTKYCLGSVLNHVLLHQTVIGEECIKQMEAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR*ALRCKE 787 SAL+ + + FG+ V+ VR SY QKPYRR +M+ +GA+V+PSPSD TE GRK+L +P+ PGSLGIAISEA E V + + KY LGSVLNHVLLHQTVIG E KQ G PDI+IG GGGSNF G ++PFIR +L G + AVEP A PS+T+GVY YD+GDTAG+TPL+KMHTLGH + PIHAGGLRYHG+AP LS + + ++EA + Q E F+ A FA+ EGI+PA E+ HA+ I A++ ++ Sbjct: 146 SALSAAGAYFGVKVRVYMVRVSYLQKPYRRTLMELYGAEVYPSPSDKTEFGRKLLAENPNHPGSLGIAISEAIEDVINSGGNAKYSLGSVLNHVLLHQTVIGLEAEKQFREAGVYPDIMIGAVGGGSNFAGFTYPFIRHRLKGSSSTRFIAVEPKASPSMTRGVYTYDYGDTAGLTPLLKMHTLGHTYQVPPIHAGGLRYHGVAPTLSVLLKHGIVEARAYHQREVFRAAHMFAKAEGIVPAPESAHAVKAAIDEAIKARD 406
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB2_PYRAB (Tryptophan synthase beta chain 2 OS=Pyrococcus abyssi GN=trpB2 PE=3 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 1.067e-76 Identity = 141/264 (53.41%), Postives = 189/264 (71.59%), Query Frame = 2 Query: 8 SALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTKYCLGSVLNHVLLHQTVIGEECIKQMEAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR*ALRCKELEKQ 799 +AL+ + +L GL V+ RASY QKPYR+ +M+ +GA+V PSPS+ TE G++ L+ DP+ PGSLGIAISEA E + +Y LGSVLNHVL+HQTVIG E +QME E PD+IIGC GGGSNF GL++PF+++ L+GK AVEP A P++T+GVY YD+GD+AG+TP +KMHTLGH + PIHAGGLRYHG+AP LS + +++ I+ QTE F+ A+ FA+ EGI+PA E+ HA+ I AL + K+ Sbjct: 151 TALSLAGALLGLKVRVYMARASYQQKPYRKTLMRIYGAEVFPSPSENTEVGKRFLKEDPNHPGSLGIAISEAIEDVLKDEKARYSLGSVLNHVLMHQTVIGLEAKEQMEEF-EEPDVIIGCVGGGSNFAGLAYPFVKDVLDGKSEYEFIAVEPKAAPTMTRGVYTYDYGDSAGLTPKLKMHTLGHRYYVPPIHAGGLRYHGLAPTLSVLINHGIVKPIAYHQTEVFEAAVLFAKAEGIVPAPESAHAVKAVIDKALEARREGKE 413
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_PYRHO (Tryptophan synthase beta chain OS=Pyrococcus horikoshii GN=trpB PE=3 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 1.394e-76 Identity = 141/259 (54.44%), Postives = 189/259 (72.97%), Query Frame = 2 Query: 8 SALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTKYCLGSVLNHVLLHQTVIGEECIKQMEAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR*ALRCK 784 +AL+ + +L GL V+ RASY QKPYR+++M+ +GA+V PSPS+ TE G++ L+ DP+ PGSLGIAISEA E ++ +Y LGSVLNHVL+HQTVIG E KQ++ E PD+IIGC GGGSNF GLS+PFI++ L+GK AVEP A P++TKGVY YD+GD+AG+TP +KM+TLGH + PIHAGGLRYHG+AP LS + +++ ++ QTE F+ A+ FA+ EGI+PA E+ HA+ I AL K Sbjct: 151 TALSLAGALIGLKVRVYMTRASYYQKPYRKILMEIYGAEVFPSPSENTEVGKRFLREDPNHPGSLGIAISEAIEDVLSDEKARYSLGSVLNHVLMHQTVIGLEAKKQVKEF-EEPDVIIGCVGGGSNFAGLSYPFIKDVLDGKAEYEFIAVEPRAVPTMTKGVYTYDYGDSAGLTPKIKMYTLGHTYYVPPIHAGGLRYHGLAPTLSVLMNHGIVKPMAYHQTEVFEAAVLFAKAEGIVPAPESAHAVRAVIDKALEAK 408
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_FERNB (Tryptophan synthase beta chain OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=trpB PE=3 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 2.628e-75 Identity = 141/253 (55.73%), Postives = 180/253 (71.15%), Query Frame = 2 Query: 8 SALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTKYCLGSVLNHVLLHQTVIGEECIKQMEAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR 766 SAL+++ FGL+ ++ V+ SY QKP+R+++M +G V PSPS++T+ GR Q PG+LGIAISEA D KY LGSVLNHVLLHQT+IG E KQ+E +G PDII+ C GGGSNFGG + PFI + L+GK N I AVEP + PSLTKG Y YDFGDTAG+TPLMKM+TLG DF+P IHAGGLRYHG +P++S +Y L++A S+ Q E F+ FA+ EGI+PA E+ HAIA I+ Sbjct: 141 SALSYAGQKFGLDVRIFMVKVSYQQKPFRKILMNLFGGDVQPSPSNLTQIGR---QFSEDHPGTLGIAISEAIHTVLNEKDAKYSLGSVLNHVLLHQTIIGLEMKKQLEIIGIKPDIIVACHGGGSNFGGSALPFIPDVLSGK-NIKIVAVEPESCPSLTKGEYRYDFGDTAGLTPLMKMYTLGKDFVPPAIHAGGLRYHGASPIVSKLYHERLIDAASVTQEEVFEAGKLFAKLEGIVPAPESAHAIAYVIK 389
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB2_PYRFU (Tryptophan synthase beta chain 2 OS=Pyrococcus furiosus GN=trpB2 PE=3 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 7.647e-75 Identity = 141/264 (53.41%), Postives = 187/264 (70.83%), Query Frame = 2 Query: 8 SALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTKYCLGSVLNHVLLHQTVIGEECIKQMEAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR*ALRCKELEKQ 799 +AL+ + +L G+ V+ RASY+QKPYR+++M+ +GA+V PSPS+ TE G++ L +P+ PGSLGIAISEA E + +Y LGSVLNHVL+HQTVIG E +QME E PD+IIGC GGGSNF GL++PF++E L+G AVEP A PS+T+GVY YDFGD+ +TP +KMHTLGH + PIHAGGLRYHG+AP LS + +++ I+ QTE F+ A FA+ EGI+PA E+ HAI TI A+ K K+ Sbjct: 140 TALSLAGALMGIKVRVYMARASYEQKPYRKVLMRIYGAEVFPSPSENTEIGKRFLSENPNHPGSLGIAISEAIEDVLKDEKARYSLGSVLNHVLMHQTVIGLEAKQQMEEF-EEPDVIIGCVGGGSNFAGLAYPFVKEVLDGDNEYEFIAVEPKAAPSMTRGVYTYDFGDSGELTPKLKMHTLGHRYHVPPIHAGGLRYHGVAPTLSVLVNNGIVKPIAYHQTEVFEAAALFAKLEGIVPAPESAHAIKATIDKAIEAKREGKE 402
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_THEAB (Tryptophan synthase beta chain OS=Thermosipho africanus (strain TCF52B) GN=trpB PE=3 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 1.704e-74 Identity = 147/266 (55.26%), Postives = 188/266 (70.68%), Query Frame = 2 Query: 8 SALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTKYCLGSVLNHVLLHQTVIGEECIKQMEAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR*ALRCKELEKQRL 805 SAL++S FG+N ++ VR S++QKP R+ +M+ + KV PSPS T++GRK + + PGSLGIAISEA E D+KY LGSVLNHVLLHQT+IG E KQ+E + PD+IIGC GGGSNFGG PFI +KL+GK N A EP + P+LTKG Y YDFGDTAG TPL+KM+TLG DFIP IHAGGLRYHG AP++S + L+EA + Q E F+ A F++ EGIIPA E++HAIA I+ AL K+ K+++ Sbjct: 142 SALSYSGLKFGINVNIYMVRVSFNQKPARKSIMKLFNGKVTPSPSRNTKSGRKY---EENHPGSLGIAISEAMEEVLQRNDSKYALGSVLNHVLLHQTIIGLEIKKQLEKLNIQPDVIIGCHGGGSNFGGTILPFIPDKLSGK-NIRFIACEPESCPTLTKGEYRYDFGDTAGFTPLLKMYTLGKDFIPPSIHAGGLRYHGAAPIISALLNHNLIEAKAFSQEETFKAARLFSKLEGIIPAPESSHAIAGAIKEALNAKKENKEKI 403
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB1_SULTO (Tryptophan synthase beta chain 1 OS=Sulfolobus tokodaii GN=trpB1 PE=3 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 8.474e-66 Identity = 130/266 (48.87%), Postives = 186/266 (69.92%), Query Frame = 2 Query: 8 SALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTKYCLGSVLNHVLLHQTVIGEECIKQMEAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR*ALRCKELEKQRL 805 +A+A + S++ L+ ++ VR SY+QKP R+ +M+ +G KV+ SP+D+TE GRKIL+ +P+ PGSLGIA+SEA E A N + +Y +GSVL+ VLLHQ+VIG E I Q++ +GE PDI+IGC GGGSNFGG ++PFI K GK + A E P + G Y YD+ DTAG+ PL+KM TLG D++P PI+AGGLRYHG+AP LS + + ++E + E ++ A F +T+GI+PA E+ HAI I AL+ K +++R+ Sbjct: 137 TAVALAASMYDLSSTIFMVRVSYEQKPMRKTIMELYGGKVYASPTDLTEFGRKILKENPNHPGSLGIAMSEAIEFAL-NHNFRYLVGSVLDVVLLHQSVIGMEAIAQLDELGEEPDILIGCVGGGSNFGGFTYPFIGAK-KGKKYIAVGAAEI---PKFSTGKYEYDYPDTAGLLPLVKMITLGKDYVPPPIYAGGLRYHGVAPTLSLLIKEKIVEWREYKEEEIYEAAKIFMKTQGIVPAPESAHAIKAVIDEALKAKTEKERRV 397
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_PYRAR (Tryptophan synthase beta chain OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=trpB PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 3.560e-64 Identity = 127/249 (51.00%), Postives = 166/249 (66.67%), Query Frame = 2 Query: 11 ALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTKYCLGSVLNHVLLHQTVIGEECIKQMEAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIR--AVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAI 751 A++ + +LFGL V+ R+SY+ K R M+T+GA V+PSPS++TEAGR+ + P PGSLGIAISEA E + Y GSVL VL+HQTVIG E ++Q+ E PD + C GGGSNF G ++P I KL G+ R AVE A P LTKG Y YDF D G+ P++KM+TLGHD++P P+HA GLRYHG AP LS + +L ++E +S PQ E + A+ FARTEGI+PA E+ HAI Sbjct: 131 AVSLAAALFGLKAVVFMTRSSYNSKRQRLTFMRTYGATVYPSPSEVTEAGRRHYR--PDHPGSLGIAISEAVEYVLSGEKRHYLPGSVLEFVLMHQTVIGLEAVRQLP---EEPDAAVACVGGGSNFAGFTYPMIGMKLRGEGFDKTRFVAVEAEAAPKLTKGEYKYDFPDAVGILPMIKMYTLGHDYVPPPVHAAGLRYHGAAPSLSLLRKLGIVEPLSYPQEEVMKAAVLFARTEGIVPAPESAHAI 374
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB2_SULSO (Tryptophan synthase beta chain 2 OS=Sulfolobus solfataricus GN=trpB2 PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 3.560e-64 Identity = 122/249 (49.00%), Postives = 172/249 (69.08%), Query Frame = 2 Query: 8 SALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTKYCLGSVLNHVLLHQTVIGEECIKQMEAVGETPDIIIGCTGGGSNFGGLSFPFIREKL-NGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAI 751 S++A + +LF + ++ VR SY KPYR+ MMQ +GA+VHPSPSD+TE GR++L D + PGSLGIAIS+A E A N KY +GSV+N ++ +T+ G E KQME +GE PD IIG GGGSN+ L++PF+ ++L +GK+ A + P +TKGVY YD+ DTA + P++KM+T+G DF+P P++AGGLRYHG+AP LS + +++A Q E F+ A F+ EG IPA ET+HA+ Sbjct: 141 SSVALASALFRMKAHIFMVRTSYYAKPYRKYMMQMYGAEVHPSPSDLTEFGRQLLAKDSNHPGSLGIAISDAVEYAHKNGG-KYVVGSVVNSDIMFKTIAGMEAKKQMELIGEDPDYIIGVVGGGSNYAALAYPFLGDELRSGKVRRKYIASGSSEVPKMTKGVYKYDYPDTAKLLPMLKMYTIGSDFVPPPVYAGGLRYHGVAPTLSLLISKGIVQARDYSQEESFKWAKLFSELEGYIPAPETSHAL 388 The following BLAST results are available for this feature:
BLAST of EY656642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 296
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Sequences
The
following sequences are available for this feature:
EST sequence >EY656642 ID=EY656642; Name=EY656642; organism=Citrus sinensis; type=EST; length=929bpback to top |