EY656642
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_BORPD (Tryptophan synthase beta chain OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=trpB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.202e-12 Identity = 71/263 (27.00%), Postives = 112/263 (42.59%), Query Frame = 2 Query: 2 HASALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNAD-TKYCLGSVLNH------VLLHQTVIGEECIKQM-EAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR 766 H A A + +G+ C V+ ++ M+ GA V P E+G + L+ A++EA TN + T Y +G+V V QTVIG EC++QM + G PD ++ GGGSN G+ +P+I + N ++ V A E + A G G + + G + AG L Y G+ P + + + + + I E R EGI+PA E++HAIA ++ Sbjct: 120 HGVATATVAARYGMECVVYMGSEDVRRQASNVYRMKLLGATVVP-----VESGSRTLKD----------ALNEAMRDWVTNIENTFYIIGTVAGPDPYPRMVRDFQTVIGNECLEQMPQDAGRQPDYVVASVGGGSNAMGIFYPYIPHE-NVRLIGVEAAGEGLDSGRHAASLAAGQVGVLHGNRTYVMQNADGQVQETHSVSAG-LDYPGVGPEHAWLKDSGRAQYVGITDDEALAAFHDCCRIEGIMPALESSHAIAQAVK 365
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_BORPA (Tryptophan synthase beta chain OS=Bordetella parapertussis GN=trpB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.202e-12 Identity = 72/263 (27.38%), Postives = 110/263 (41.83%), Query Frame = 2 Query: 2 HASALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNAD-TKYCLGSVLNH------VLLHQTVIGEECIKQM-EAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR 766 H A A + +G+ C V+ ++ M+ GA V P ++G + L+ A++EA TN + T Y +G+V V QTVIG+EC+ QM E +G PD ++ GGGSN G+ P+I + N ++ V A E + A G G + + G + AG L Y G+ P + + + E I E R EGI+PA E+ HAIA ++ Sbjct: 120 HGVATATVAARYGMECVVFMGSEDVRRQASNVYRMKLLGATVVP-----VDSGSRTLKD----------ALNEAMRDWVTNIENTFYIIGTVAGPDPYPRMVRDFQTVIGQECLTQMPEVIGRQPDYVVAAVGGGSNAMGIFHPYIPYE-NVRLIGVEAAGEGMETGRHAASLAAGQIGVLHGNRTYVMQNADGQVQETHSVSAG-LDYPGVGPEHAWLKDSGRAEYAGITDDEALAAFHDCCRIEGIMPALESAHAIAQAVK 365
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_BORBR (Tryptophan synthase beta chain OS=Bordetella bronchiseptica GN=trpB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.202e-12 Identity = 72/263 (27.38%), Postives = 110/263 (41.83%), Query Frame = 2 Query: 2 HASALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNAD-TKYCLGSVLNH------VLLHQTVIGEECIKQM-EAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR 766 H A A + +G+ C V+ ++ M+ GA V P ++G + L+ A++EA TN + T Y +G+V V QTVIG+EC+ QM E +G PD ++ GGGSN G+ P+I + N ++ V A E + A G G + + G + AG L Y G+ P + + + E I E R EGI+PA E+ HAIA ++ Sbjct: 120 HGVATATVAARYGMECVVFMGSEDVRRQASNVYRMKLLGATVVP-----VDSGSRTLKD----------ALNEAMRDWVTNIENTFYIIGTVAGPDPYPRMVRDFQTVIGQECLTQMPEVIGRQPDYVVAAVGGGSNAMGIFHPYIPYE-NVRLIGVEAAGEGMETGRHAASLAAGQIGVLHGNRTYVMQNADGQVQETHSVSAG-LDYPGVGPEHAWLKDSGRAEYAGITDDEALAAFHDCCRIEGIMPALESAHAIAQAVK 365
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_AERHH (Tryptophan synthase beta chain OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=trpB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.202e-12 Identity = 78/280 (27.86%), Postives = 114/280 (40.71%), Query Frame = 2 Query: 2 HASALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTK-YCLGSVLNH------VLLHQTVIGEECIKQ-MEAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIR--AVEPTAWPSLTKGVYAYDFGDTA-----GMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR*ALRCKELEK 796 H A A +C+L GL C V+ +++ M+ GA V P S +L A +EA A N ++ Y LG+ V Q +IGEE Q E PD +I C GGGSN G+ FI E P +R VEP + G + G + GM + T G + AG L + + P +H+ + E S+ E + A++EGIIPA E++HA+A ++ A E E+ Sbjct: 114 HGVATALACALLGLKCRVYMGAKDCERQKPNVFRMKLMGATVIPVHS---------------GSSTLKDACNEALRDWAANYESAHYLLGTAAGPHPFPTIVREFQKMIGEEAKAQCFEKEERLPDAVIACVGGGSNAIGMFADFIDE-------PSVRLIGVEPGGH-GIESGEHGAPLGHGSKGVFFGMHSYLMQDTQGQIQESYSVSAG-LDFPSVGPQHAHLAAIGRAEYPSVTDKEALDAFQELAKSEGIIPALESSHALAHALKMARSEPEKEQ 369
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_VIBSL (Tryptophan synthase beta chain OS=Vibrio splendidus (strain LGP32) GN=trpB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.202e-11 Identity = 77/267 (28.84%), Postives = 115/267 (43.07%), Query Frame = 2 Query: 2 HASALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAA-EVAATNADTKYCLGSVLNH------VLLHQTVIGEECIKQMEA-VGETPDIIIGCTGGGSNFGGLSFPFIRE---KLNGKINPVIRAVEPTAWPS-LTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR 766 H A A +C+L GL C V+ +++ M+ GA+V P S +L A +EA + +AT D Y LG+ V Q +IGEE Q+ A G PD +I C GGGSN G+ FI E +L G + P + ++ + L G FG A PLM+ G + AG L + + P +H+ + E ++ E + AR EGII A E++HA+A ++ Sbjct: 114 HGVATALACALLGLKCRVYMGAKDVERQSPNVFRMKLMGAEVIPVHS---------------GSSTLKDACNEALRDWSATYEDAHYLLGTAAGPHPFPTIVRDFQRMIGEETKNQILAREGRLPDAVIACVGGGSNAIGMFADFIEEESVRLIG-VEPAGKGIDTDQHGAPLKHGKTGIFFGMKA---PLMQDEN-GQVEESYSVSAG-LDFPSVGPQHAHLNAIGRAEYDNVTDDEALEAFQLIARKEGIIAALESSHALAHAVK 359
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_STAAW (Tryptophan synthase beta chain OS=Staphylococcus aureus (strain MW2) GN=trpB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.202e-11 Identity = 60/216 (27.78%), Postives = 96/216 (44.44%), Query Frame = 2 Query: 158 GRKILQMDPSSPGSLGIAISEAAEVAATNAD-TKYCLGSVLNH------VLLHQTVIGEECIKQ-MEAVGETPDIIIGCTGGGSNFGGLSFPFIREKL---------NGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIA 754 G K++ ++ G+L A+++A + ++ D T Y LGS L V Q+VIG+E Q ++ G PD I+ C GGGSN G +PFI++ + G P + G Y D G L H++ + GL Y G+ P S+ +++ + + T+ I F + EGIIPA E+ HA++ Sbjct: 160 GAKVVAVEDGQ-GTLSDAVNKALQYWVSHVDDTHYLLGSALGPDPFPTIVRDFQSVIGKEIKSQILKKEGRLPDAIVACIGGGSNAIGTFYPFIKDDVALYGVEAAGQGDDTDKHALAIGKGSPGVLHGTKMYLIQDEDGQVQLA--HSI----------SAGLDYPGIGPEHSYYHDIGRVTFENASDTQAMNALINFTKHEGIIPAIESAHALS 362
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_STAAT (Tryptophan synthase beta chain OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=trpB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.202e-11 Identity = 60/216 (27.78%), Postives = 96/216 (44.44%), Query Frame = 2 Query: 158 GRKILQMDPSSPGSLGIAISEAAEVAATNAD-TKYCLGSVLNH------VLLHQTVIGEECIKQ-MEAVGETPDIIIGCTGGGSNFGGLSFPFIREKL---------NGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIA 754 G K++ ++ G+L A+++A + ++ D T Y LGS L V Q+VIG+E Q ++ G PD I+ C GGGSN G +PFI++ + G P + G Y D G L H++ + GL Y G+ P S+ +++ + + T+ I F + EGIIPA E+ HA++ Sbjct: 160 GAKVVAVEDGQ-GTLSDAVNKALQYWVSHVDDTHYLLGSALGPDPFPTIVRDFQSVIGKEIKSQILKKEGRLPDAIVACIGGGSNAIGTFYPFIKDDVALYGVEAAGQGDDTDKHALAIGKGSPGVLHGTKMYLIQDEDGQVQLA--HSI----------SAGLDYPGIGPEHSYYHDIGRVTFENASDTQAMNALINFTKHEGIIPAIESAHALS 362
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_STAAS (Tryptophan synthase beta chain OS=Staphylococcus aureus (strain MSSA476) GN=trpB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.202e-11 Identity = 60/216 (27.78%), Postives = 96/216 (44.44%), Query Frame = 2 Query: 158 GRKILQMDPSSPGSLGIAISEAAEVAATNAD-TKYCLGSVLNH------VLLHQTVIGEECIKQ-MEAVGETPDIIIGCTGGGSNFGGLSFPFIREKL---------NGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIA 754 G K++ ++ G+L A+++A + ++ D T Y LGS L V Q+VIG+E Q ++ G PD I+ C GGGSN G +PFI++ + G P + G Y D G L H++ + GL Y G+ P S+ +++ + + T+ I F + EGIIPA E+ HA++ Sbjct: 160 GAKVVAVEDGQ-GTLSDAVNKALQYWVSHVDDTHYLLGSALGPDPFPTIVRDFQSVIGKEIKSQILKKEGRLPDAIVACIGGGSNAIGTFYPFIKDDVALYGVEAAGQGDDTDKHALAIGKGSPGVLHGTKMYLIQDEDGQVQLA--HSI----------SAGLDYPGIGPEHSYYHDIGRVTFENASDTQAMNALINFTKHEGIIPAIESAHALS 362
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_STAAE (Tryptophan synthase beta chain OS=Staphylococcus aureus (strain Newman) GN=trpB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.202e-11 Identity = 60/216 (27.78%), Postives = 96/216 (44.44%), Query Frame = 2 Query: 158 GRKILQMDPSSPGSLGIAISEAAEVAATNAD-TKYCLGSVLNH------VLLHQTVIGEECIKQ-MEAVGETPDIIIGCTGGGSNFGGLSFPFIREKL---------NGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIA 754 G K++ ++ G+L A+++A + ++ D T Y LGS L V Q+VIG+E Q ++ G PD I+ C GGGSN G +PFI++ + G P + G Y D G L H++ + GL Y G+ P S+ +++ + + T+ I F + EGIIPA E+ HA++ Sbjct: 160 GAKVVAVEDGQ-GTLSDAVNKALQYWVSHVDDTHYLLGSALGPDPFPTIVRDFQSVIGKEIKSQILKKEGRLPDAIVACIGGGSNAIGTFYPFIKDDVALYGVEAAGQGDDTDKHALAIGKGSPGVLHGTKMYLIQDEDGQVQLA--HSI----------SAGLDYPGIGPEHSYYHDIGRVTFENASDTQAMNALINFTKHEGIIPAIESAHALS 362
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_STAAC (Tryptophan synthase beta chain OS=Staphylococcus aureus (strain COL) GN=trpB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.202e-11 Identity = 60/216 (27.78%), Postives = 96/216 (44.44%), Query Frame = 2 Query: 158 GRKILQMDPSSPGSLGIAISEAAEVAATNAD-TKYCLGSVLNH------VLLHQTVIGEECIKQ-MEAVGETPDIIIGCTGGGSNFGGLSFPFIREKL---------NGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIA 754 G K++ ++ G+L A+++A + ++ D T Y LGS L V Q+VIG+E Q ++ G PD I+ C GGGSN G +PFI++ + G P + G Y D G L H++ + GL Y G+ P S+ +++ + + T+ I F + EGIIPA E+ HA++ Sbjct: 160 GAKVVAVEDGQ-GTLSDAVNKALQYWVSHVDDTHYLLGSALGPDPFPTIVRDFQSVIGKEIKSQILKKEGRLPDAIVACIGGGSNAIGTFYPFIKDDVALYGVEAAGQGDDTDKHALAIGKGSPGVLHGTKMYLIQDEDGQVQLA--HSI----------SAGLDYPGIGPEHSYYHDIGRVTFENASDTQAMNALINFTKHEGIIPAIESAHALS 362 The following BLAST results are available for this feature:
BLAST of EY656642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 296
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Sequences
The
following sequences are available for this feature:
EST sequence >EY656642 ID=EY656642; Name=EY656642; organism=Citrus sinensis; type=EST; length=929bpback to top |