EY656642
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB1_PYRAB (Tryptophan synthase beta chain 1 OS=Pyrococcus abyssi GN=trpB1 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.610e-16 Identity = 77/277 (27.80%), Postives = 126/277 (45.49%), Query Frame = 2 Query: 2 HASALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAA-EVAATNADTKYCLGSVLNH------VLLHQTVIGEECIKQ-MEAVGETPDIIIGCTGGGSNFGGLSFPFIREKL--------------NGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR 766 H A A + +L G+ +++ +++ M+ GA V P G K L+ AI+EA + AT + Y +GSV+ V Q+VIG E +Q +EA G+ PD+I+ C GGGSN G+ +PF+++K +GK + + A E + G+ +Y D G + H++ A GL Y G+ P +++ E E +++ E + + +RTEGIIPA E+ HA+A I+ Sbjct: 110 HGVATAMAGALLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIP-----VHTGSKTLKD----------AINEALRDWVATFEYSHYLIGSVVGPHPYPIIVRDFQSVIGREAREQILEAEGDLPDVIVACVGGGSNAMGIFYPFVKDKSVRLIGVEAGGKGIESGKHSASLNAGE----IGVFHGMLSYFLQDEEGQ--IRTTHSI----------APGLDYPGVGPEHAYLKESGRAEYVTVTDEEALRAFHELSRTEGIIPALESAHAVAYAIK 355
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_THEP3 (Tryptophan synthase beta chain OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=trpB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.715e-16 Identity = 76/259 (29.34%), Postives = 113/259 (43.63%), Query Frame = 2 Query: 2 HASALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNAD-TKYCLGSVLNH------VLLHQTVIGEECIKQ-MEAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIA 754 H A A + ++FG+ CE++ ++ M+ GAKV P G K L+ A++EA TN D T Y +GSV+ V Q VIG+E +Q ++ G PD +I C GGGSN G+ +PFI +K K+ V A E + G GM + G +P + GL Y G+ P + + E + + E + ++TEGIIPA E+ HA+A Sbjct: 112 HGVATATAAAMFGMECEIFMGEEDIKRQSLNVFRMKLLGAKVTP-----VTTGTKTLKD----------AVNEAIRDWVTNIDNTFYVIGSVVGPHPYPTMVRDFQRVIGDEAKEQILQKEGRLPDYVIACVGGGSNAMGIFYPFIEDK-EVKLIGVEAAGEGIETGKHAAAMAKGSVGVLHGMMTYLLQDEEGR-IMPVYSISAGLDYPGVGPEHAFLKESNRAQYVYATDEEALAAFMDLSQTEGIIPALESAHALA 353
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB1_PYRFU (Tryptophan synthase beta chain 1 OS=Pyrococcus furiosus GN=trpB1 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.715e-16 Identity = 80/284 (28.17%), Postives = 132/284 (46.48%), Query Frame = 2 Query: 2 HASALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAA-EVAATNADTKYCLGSVLNH------VLLHQTVIGEECIKQ-MEAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPD------PIH--AGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR*ALRCKELEKQRL 805 H A A + +L G+ +++ +++ M+ GA V P +G + L+ AI+EA + AT T Y +GSV+ V Q+VIG E Q +EA G+ PD+I+ C GGGSN G+ +PF+ +K K+ V VE KG+ + + + H + F+ D P H A GL Y G+ P +++ ++ E +++ E + + +RTEGIIPA E+ HA+A ++ A KE+ + + Sbjct: 110 HGVATAMAGALLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIP-----VNSGSRTLKD----------AINEALRDWVATFEYTHYLIGSVVGPHPYPTIVRDFQSVIGREAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFVNDK---KVKLV--GVEAGG-----KGLESGKHSASLNAGQVGVFHGMLSYFLQDEEGQIKPTHSIAPGLDYPGVGPEHAYLKKIQRAEYVTVTDEEALKAFHELSRTEGIIPALESAHAVAYAMKLA---KEMSRDEI 365
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_METVO (Tryptophan synthase beta chain OS=Methanococcus voltae GN=trpB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 6.158e-16 Identity = 77/270 (28.52%), Postives = 123/270 (45.56%), Query Frame = 2 Query: 2 HASALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEV-AATNADTKYCLGSVLNH------VLLHQTVIGEECIKQ-MEAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIH--------AGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTI 763 H + + +LFGL E++ R +++ M+ GAKV P + G K+L+ A++EA AT +T Y LG+V+ V Q+VIG+E KQ ME PD ++ C GGGSN GL PF+ ++ N + V+ + KG+ G + +H + F+ D + GL Y G+ P ++++ L ++ S + + ++ RTEGIIPA E++HAIA I Sbjct: 120 HGVGTSMAGALFGLETEIFMGRVDTERQQPNVARMKLLGAKVTP-----VDTGSKVLKD----------AVNEAMRNWTATFENTHYLLGTVMGPHPFPTMVRDFQSVIGKEVKKQIMEQEERLPDYLVACIGGGSNAMGLFHPFLSNNISTG-NDDAKNVKMIGIEAAGKGLNTSLHGASITKGEKGVLHGMLSYFLQDEDGQIEEAYSISAGLDYPGIGPEHAYLHNLGRVQYASATDKQALKAFMELTRTEGIIPALESSHAIAYAI 373
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_PROM1 (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain NATL1A) GN=trpB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 8.043e-16 Identity = 80/263 (30.42%), Postives = 111/263 (42.21%), Query Frame = 2 Query: 2 HASALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTK-YCLGSVLNH------VLLHQTVIGEECIKQM-EAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDF--GDTAGMTPLMKMHTLGHDFIPDPIH--AGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIA 754 H A A C+ FGL C ++ + ++ MQ GA V P S +L A SEA TN +T Y LGSV V VIGEE +Q +A G +PD+++ C GGGSN GL F+ +K I VE A + G +A G + M + D + H + GL Y G+ P S++ E+ E ++ TE + ++ EGIIPA ET HA A Sbjct: 138 HGVATATVCARFGLECIIYMGKEDMRRQALNVFRMQLLGASVRPVTS---------------GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMLVRDFHAVIGEETKQQCKQAFGRSPDVLLACVGGGSNAMGLFHSFVEDKSVRMI-----GVE-AAGDGVETGRHAATITEGRVGVLHGAMSLLLQDKDGQVEEAHSISAGLDYPGVGPEHSYLKEIGRAEYAAVTDTEAIEALQLVSKLEGIIPALETAHAFA 379
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_CLONN (Tryptophan synthase beta chain OS=Clostridium novyi (strain NT) GN=trpB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 8.043e-16 Identity = 78/268 (29.10%), Postives = 118/268 (44.03%), Query Frame = 2 Query: 2 HASALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEV-AATNADTKYCLGSVLNH------VLLHQTVIGEECIKQ-MEAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTA-----GMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR 766 H A A + +LFG+ C ++ ++ M+ GAK+ P S G+L A+ EA + ++ DT Y LGS + V Q +IGEE Q + G PD +I C GGGSN GL +PFI+++ N I VE + G + F D GM ++ G+ I AG L Y G+ P +++ ++ + +SI E + EGIIPA E++HAIA T++ Sbjct: 112 HGVATATAAALFGMECTIFMGEEDIKRQKLNTFKMELLGAKIKPVKS---------------GNGTLKDAVDEAIKQWVKSSDDTFYVLGSAVGPHPYPTMVREFQKIIGEETKDQILRMEGRLPDTLIACVGGGSNAIGLFYPFIKDE-----NIEIIGVE-AGGKGVETGEHGAAFADGRVGVIHGMKTVIMEDDNGNVKEAYSISAG-LDYPGVGPEHAYLNDIGRAKYVSITDEEAVEAFKYLCANEGIIPALESSHAIAYTMK 357
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_BACWK (Tryptophan synthase beta chain OS=Bacillus weihenstephanensis (strain KBAB4) GN=trpB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 8.043e-16 Identity = 81/276 (29.35%), Postives = 126/276 (45.65%), Query Frame = 2 Query: 2 HASALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNA-DTKYCLGSVLNH------VLLHQTVIGEECIKQMEAV-GETPDIIIGCTGGGSNFGGLSFPFIREK---LNGKINPVIRAVEPTAW-PSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR*ALRCKELE 793 H A A C+LFGL C ++ ++ M+ GAKV + + G+L A++EA ++ DT Y +GSVL V Q+VIG+E KQ EA+ G+ P+ ++ C GGGSN G+ +PF+ ++ L G + + V +LTKG G G + + G I A GL Y G+ P S + ++ + SI E + + EGIIPA E++HA+A ++ A + K+ E Sbjct: 119 HGVATATVCALFGLECVIFMGEEDVRRQKLNVFRMELLGAKV---------------ESVAAGSGTLKDAVNEALRYWVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGKETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYG-VEAAGKGVHTEKHAATLTKG----SVGVLHGSMMYLLQNEEGQIQEAHSISA-GLDYPGVGPEHSLLKDIGRVSYHSITDEEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKKDE 373
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB1_WOLSU (Tryptophan synthase beta chain 1 OS=Wolinella succinogenes GN=trpB1 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 8.043e-16 Identity = 78/281 (27.76%), Postives = 123/281 (43.77%), Query Frame = 2 Query: 2 HASALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATN-ADTKYCLGSVLNH------VLLHQTVIGEECIKQ-MEAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTA-WPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIH--AGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR*ALRCKELEKQRLSD 811 H ALA + + FG+ CE+ ++ + M+ GAKV P G + L+ A+ A E + A+ Y +GSV+ V Q+V+G E +Q +E GE PD I+ C GGGSN G+ FI + + + VEP SL + + +G M + D P +H A GL Y + P ++++E+ ++ + E + +R EGIIPA E+ HAIA ++ L K+RL + Sbjct: 124 HGVALATAAAYFGMECEIHMGEVDIAKEHPNVIRMKMLGAKVVP-----VSFGERTLKE----------AVDSAFEAYLKDPANAIYAIGSVVGPHPFPKMVRDFQSVVGAEAKEQFLEMTGELPDHIVACVGGGSNAMGIFSAFIDDPVE------LWGVEPLGKGKSLGEHAASLSYGKEGVMHGFNSIMLQNEDGSPASVHSVASGLDYPSVGPEHAYLHEIGRTHSVGVSDEEAIKNFFALSRLEGIIPAIESAHAIAYGMK-------LAKERLGE 376
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_PROMT (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain NATL2A) GN=trpB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.050e-15 Identity = 80/263 (30.42%), Postives = 111/263 (42.21%), Query Frame = 2 Query: 2 HASALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTK-YCLGSVLNH------VLLHQTVIGEECIKQM-EAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDF--GDTAGMTPLMKMHTLGHDFIPDPIH--AGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIA 754 H A A C+ FGL C ++ + ++ MQ GA V P S +L A SEA TN +T Y LGSV V VIGEE +Q +A G +PD+++ C GGGSN GL F+ +K I VE A + G +A G + M + D + H + GL Y G+ P S++ E+ E ++ TE + ++ EGIIPA ET HA A Sbjct: 138 HGVATATVCARFGLECIIYMGKEDMRRQALNVFRMQLLGASVRPVTS---------------GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMLVRDFHAVIGEETKQQCKQAFGRSPDVLLACVGGGSNAMGLFHSFVEDKSVRMI-----GVE-AAGDGVETGRHAATITEGRIGVLHGAMSLLLQDKDGQVEEAHSISAGLDYPGVGPEHSYLKEIGRAEYAAVTDTEAIEALQLVSKLEGIIPALETAHAFA 379
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_POLNA (Tryptophan synthase beta chain OS=Polaromonas naphthalenivorans (strain CJ2) GN=trpB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.050e-15 Identity = 78/271 (28.78%), Postives = 115/271 (42.44%), Query Frame = 2 Query: 2 HASALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNAD-TKYCLGSVLNH------VLLHQTVIGEECIKQMEAV--GETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVE-----------PTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIA 754 H A A C+ +GL C V+ ++ M GA V P E+G K L+ A++EA N D T Y +G+V V Q+VIG EC+ QM + G PD ++ C GGGSN G+ P+I + N ++ V A E P + G Y + G + + H++ + GL Y G+ P +++ ++ E + I TE Q RTEGIIPA E+ HA+A Sbjct: 120 HGVATATICARYGLECVVYMGSEDVKRQSPNVYRMNLLGATVVP-----VESGSKTLKD----------ALNEAMRDWVANVDNTFYIIGTVAGPHPYPMMVRDFQSVIGTECLSQMPEMNAGRQPDAVVACVGGGSNAMGIFHPYIAHE-NTRLIGVEAAGEGLDSGKHSASLQRGLPGVLHGNRTYVLQNDDGQ--VTETHSI----------SAGLDYPGVGPEHAYLKDIGRAEYVGITDTEALQAFHYLCRTEGIIPALESAHAVA 362 The following BLAST results are available for this feature:
BLAST of EY656642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 296
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Sequences
The
following sequences are available for this feature:
EST sequence >EY656642 ID=EY656642; Name=EY656642; organism=Citrus sinensis; type=EST; length=929bpback to top |