EY656642
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_ANAVT (Tryptophan synthase beta chain OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=trpB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.792e-15 Identity = 82/269 (30.48%), Postives = 117/269 (43.49%), Query Frame = 2 Query: 2 HASALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTK-YCLGSVLNH------VLLHQTVIGEECIKQ-MEAVGETPDIIIGCTGGGSNFGGLSFPFIRE---KLNGK------INPVIRAVEPTAWP-SLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIA 754 H A A C+ FGL C ++ +++ M+ GA+V P EAG G+L A SEA TN +T Y LGSV V VIG+E Q +E G PDI++ C GGGSN GL + F+ E +L G +N A T + G +Y D G +++ H++ + GL Y G+ P S++ ++ E S+ + + +R EGIIPA ET HAIA Sbjct: 135 HGVATATVCARFGLECVIYMGVHDMERQALNVFRMRLMGAEVRP-----VEAGT----------GTLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGQETRAQALEKWGGLPDILLACVGGGSNAMGLFYEFVNESSIRLIGVEAAGEGVNTEKHAATLTKGRVGVLHGAMSYLLQDEDGQ--VIEAHSI----------SAGLDYPGVGPEHSYLKDVGRAEYYSVTDEQALAAFQRLSRLEGIIPALETAHAIA 376
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB2_ANASP (Tryptophan synthase beta chain 2 OS=Anabaena sp. (strain PCC 7120) GN=trpB2 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.792e-15 Identity = 81/269 (30.11%), Postives = 115/269 (42.75%), Query Frame = 2 Query: 2 HASALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTK-YCLGSVLNH------VLLHQTVIGEECIKQ-MEAVGETPDIIIGCTGGGSNFGGLSFPFIRE---KLNGK------INPVIRAVEPTAWP-SLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIA 754 H A A C+ FGL C ++ +++ M+ GA+V P + G+L A SEA TN +T Y LGSV V VIG+E Q +E G PDI++ C GGGSN GL + F+ E KL G +N A T + G +Y D G +++ H++ + GL Y G+ P S++ ++ E S+ E + +R EGIIPA ET HAIA Sbjct: 135 HGVATATVCARFGLECVIYMGVHDMERQALNVFRMRLMGAEVRPVAA---------------GTGTLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGQETRAQALEKWGGLPDILLACVGGGSNAMGLFYEFVNESSIKLIGVEAAGEGVNTEKHAATLTKGRVGVLHGAMSYLLQDEDGQ--VIEAHSI----------SAGLDYPGVGPEHSYLKDVGRAEYYSVTDEEALAAFQRLSRLEGIIPALETAHAIA 376
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_PROM5 (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain MIT 9515) GN=trpB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.340e-15 Identity = 79/259 (30.50%), Postives = 109/259 (42.08%), Query Frame = 2 Query: 2 HASALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTK-YCLGSVLNH------VLLHQTVIGEECIKQ-MEAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIA 754 H A A C+ FGL C ++ ++ M+ GA+V ++ S +L A SEA +N +T Y LGSV V VIGEE KQ +E+ G PDI++ C GGGSN GL PF++EK + ++ V A + G G L+ G I A GL Y G+ P S++ ++ E S+ TE + EGIIPA ET HA A Sbjct: 137 HGVATATVCARFGLKCIIYMGAEDIKRQSLNVFRMKLLGAEV---------------KVVTSGTATLKDATSEAIRDWVSNVETTHYILGSVAGPHPFPMIVRDFHAVIGEEAKKQCVESFGSLPDILLACVGGGSNAMGLFHPFVKEK-SVRLIGVEAAGSGVNTDKHAATITKGSVGILHGSMSLLLQDKNGQVQEAHSISA-GLDYPGVGPEHSYLKDIGRAEYGSVTDTEALNALKLVSELEGIIPALETAHAFA 378
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_PROM0 (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain MIT 9301) GN=trpB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.340e-15 Identity = 83/262 (31.68%), Postives = 111/262 (42.37%), Query Frame = 2 Query: 2 HASALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTK-YCLGSVLNH------VLLHQTVIGEECIKQ-MEAVGETPDIIIGCTGGGSNFGGLSFPFIRE---KLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIA 754 H A A C+ FGL C ++ ++ M+ GA+V K++ S +L A SEA +N +T Y LGSV V VIGEE KQ +E+ G PDI++ C GGGSN GL PF++E +L G ++TKG G G L+ G I A GL Y G+ P SH+ E+ E S+ E + EGIIPA ET+HA A Sbjct: 137 HGVATATVCARFGLKCIIYMGAEDIKRQSLNVFRMKLLGAEV------------KVVN---SGTATLKDATSEAIRDWVSNVETTHYILGSVAGPHPFPKIVRDFHAVIGEETKKQCLESFGSFPDILLACVGGGSNAMGLFHPFVKETSVRLIGVEAAGSGVDTDKHAATITKG----SVGILHGSMSLLLQDDNGQVQEAHSISA-GLDYPGVGPEHSHLKEIGRAEYGSVTDQEALDALKLVSELEGIIPALETSHAFA 378
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_BACC1 (Tryptophan synthase beta chain OS=Bacillus cereus (strain ATCC 10987) GN=trpB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.340e-15 Identity = 80/276 (28.99%), Postives = 125/276 (45.29%), Query Frame = 2 Query: 2 HASALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNA-DTKYCLGSVLNH------VLLHQTVIGEECIKQMEAV-GETPDIIIGCTGGGSNFGGLSFPFIREK---LNGKINPVIRAVEPTAW-PSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR*ALRCKELE 793 H A A C+L GL C ++ ++ M+ GAKV + + G+L A++EA ++ DT Y +GSVL V Q+VIG+E KQ EA+ G+ P+ ++ C GGGSN G+ +PF+ ++ L G + + V +LTKG G G + + G I A GL Y G+ P S + ++ + SI E + + EGIIPA E++HA+A ++ A + K+ E Sbjct: 119 HGVATATVCALLGLECVIFMGEEDVRRQKLNVFRMELLGAKV---------------ESVAAGSGTLKDAVNEALRYWVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGKETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYG-VEAAGKGVHTEQHAATLTKG----SVGVLHGSMMYLLQNEEGQIQEAHSISA-GLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAAQMKKDE 373
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_SYNPW (Tryptophan synthase beta chain OS=Synechococcus sp. (strain WH7803) GN=trpB PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.056e-15 Identity = 80/259 (30.89%), Postives = 108/259 (41.70%), Query Frame = 2 Query: 2 HASALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTK-YCLGSVLNH------VLLHQTVIGEECIKQM-EAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIA 754 H A A C+ FGL C V+ ++ M+ GA VHP + +L A SEA TN +T Y LGSV V VIG+E +Q EA G PD+++ C GGGSN GL PF+ E + ++ V A + A + G G L+ G I AG L Y G+ P S++ E+ E ++ E + +R EGIIPA ET HA A Sbjct: 137 HGVATATVCARFGLECVVYMGAEDMRRQALNVFRMRLLGATVHPVTA---------------GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMLVRDFHAVIGQETRQQCREAFGRLPDVLMACVGGGSNAMGLFHPFV-ECTDVRLIGVEAAGDGVATGRHAATITEGRVGVLHGAMSLLLQDQDGQVQEAHSISAG-LDYPGVGPEHSYLREIGRAEYGAVTDAEALEALQLVSRLEGIIPALETAHAFA 378
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_PSEF5 (Tryptophan synthase beta chain OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=trpB PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.056e-15 Identity = 81/279 (29.03%), Postives = 120/279 (43.01%), Query Frame = 2 Query: 2 HASALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNAD-TKYCLGSVLNH------VLLHQTVIGEECIKQMEAV-GETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHD---FIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR*ALRCKELEKQRL 805 H A A + FGL+C ++ +++ M+ GA+V P + G+L A++EA TN D T Y +G+V V Q VIG+E +QM+A G PD ++ C GGGSN GL PF+ +K + I VE + T A G G+ + L D I + GL Y G+ P + ++++ +E S+ E Q R EGIIPA E+ HA+A+ + R L K L Sbjct: 123 HGVATATVAARFGLDCVIYMGTTDIERQQANVFRMKLLGAEVIPVVA---------------GTGTLKDAMNEALRDWVTNVDSTFYLIGTVAGPHPYPAMVRDFQAVIGKETREQMQAQEGRLPDSLVACIGGGSNAMGLFHPFLDDK-----SVEIIGVEAAGYGIETGKHAASLNGGVPGVLHGNRTFLLQDDDGQIIDAHSISAGLDYPGIGPEHAWLHDIGRVEYTSVTDDEALAAFHQCCRLEGIIPALESAHALAEVFK---RAPNLPKDHL 378
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_CAMJD (Tryptophan synthase beta chain OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=trpB PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.056e-15 Identity = 69/256 (26.95%), Postives = 115/256 (44.92%), Query Frame = 2 Query: 2 HASALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTKYCLGSVLNHVLLHQTVIGEECIKQMEAVGETPDIIIGCTGGGSNFGGLSFPFIRE---KLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIH--AGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIA 754 H A A + +L GL CE++ ++ M+ GAK+H ++G K L+ ++ + + +A Y ++ H Q++IG+EC Q++ + + D II GGGSN G+ + FI++ KL G + +L KG + G GM + LG+ P+H + GL Y G+ PL + ++E + +I EC Q + EGII A E++HA+A Sbjct: 112 HGLATATAAALLGLECEIYMGATDVQRQALNVYKMELLGAKIHA-----VQSGLKTLKEATTAAIQAWVGDIKNIFYVVGSAVGPYPYPKMVTHF---QSIIGKECKMQLQKLNKKVDYIIAAVGGGSNAAGIFYDFIKDENVKLIGIEAGGLGVDTLYHAATLNKG----ETGIIHGMKTKVLQDDLGNIL---PVHSVSAGLDYPGIGPLHAFLFESKRAQYHAISDEECMQALKLLCKEEGIIAAIESSHALA 352
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_BRAJA (Tryptophan synthase beta chain OS=Bradyrhizobium japonicum GN=trpB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.992e-15 Identity = 80/294 (27.21%), Postives = 123/294 (41.84%), Query Frame = 2 Query: 2 HASALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNA-DTKYCLGSVLNH------VLLHQTVIGEECIKQMEAV-GETPDIIIGCTGGGSNFGGLSFPFIR---------EKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR*ALRCKELEKQRLSDGMCAMDI 832 H A A C+ FGL C V+ +++ + M+ GAKV P ++G + L+ A++EA TN +T YC+G+V V Q++IG E QM+ V G PD ++ C GGGSN GL PF+ E + + A P + G Y D G + H++ + GL Y G+ P S ++E+ + +S E ++ EGIIPA E HAIA + EL +R D + +++ Sbjct: 126 HGVATATLCARFGLECVVYMGAVDVERQQPNVIRMEMLGAKVVP-----VQSGTRTLKD----------AMNEALRDWVTNVHNTFYCIGTVAGPHPYPTLVRDFQSIIGNETKAQMQEVEGRLPDSLVACIGGGSNAMGLFHPFLDDPSVEIFGVEAAGHGLTQLHAASIAGGRPGVLHGNRTYLLMDADGQ--IQDAHSI----------SAGLDYPGIGPEHSWLHEIGRVNYLSATDDEALAAFQLLSKLEGIIPALEPAHAIA-------KVMELAPKRAKDHLMVVNL 385
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_BACC2 (Tryptophan synthase beta chain OS=Bacillus cereus (strain G9842) GN=trpB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.992e-15 Identity = 80/276 (28.99%), Postives = 124/276 (44.93%), Query Frame = 2 Query: 2 HASALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNA-DTKYCLGSVLNH------VLLHQTVIGEECIKQMEAV-GETPDIIIGCTGGGSNFGGLSFPFIREK---LNGKINPVIRAVEPTAW-PSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR*ALRCKELE 793 H A A C+L GL C ++ ++ M+ GAKV + + G+L A++EA ++ DT Y +GSVL V Q+VIG E KQ EA+ G+ P+ ++ C GGGSN G+ +PF+ ++ L G + + V +LTKG G G + + G I A GL Y G+ P S + ++ + SI E + + EGIIPA E++HA+A ++ A + K+ E Sbjct: 119 HGVATATVCALLGLECVIFMGEEDVRRQKLNVFRMELLGAKV---------------ESVAAGSGTLKDAVNEALRYWVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGNETKKQYEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYG-VEAAGKGVHTEKHAATLTKG----SVGVLHGSMMYLLQNEEGQIQEAHSISA-GLDYPGVGPEHSLLKDIGRVSYHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPKMKKDE 373 The following BLAST results are available for this feature:
BLAST of EY656642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 296
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Sequences
The
following sequences are available for this feature:
EST sequence >EY656642 ID=EY656642; Name=EY656642; organism=Citrus sinensis; type=EST; length=929bpback to top |