EY656638

Overview
NameEY656638
Unique NameEY656638
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length935
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY656638 vs. ExPASy Swiss-Prot
Match: ACSL4_MOUSE (Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculus GN=Acsl4 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.628e-17
Identity = 76/313 (24.28%), Postives = 134/313 (42.81%), Query Frame = 2
Query:   44 EARPAADGKPSAGPVYRCIYAKDGLLESPV-GLESPWQFFCDSAKRIPNNQMLGRRKV--------SDGKV------GPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKT--NISTIMYTSGTTGEPKGVVLTNXAIVAEVLSVDXMFVVTGKVCSEEEHTSHPSXGHIYDQIIELIAXHRGCHXDFAGDXSYFDETS 931
            +A+P +D KP  G  YR +   D L    + G ++  + F  +  +      LG R++         +GKV      G Y W+ Y EV      FGS + + G+ P +   I+     EW+IA + C       V LY TLG  AV   +N +E S        + S L         +K I+   N + ++ +  E L +      E L     +  +PP + T  +++ +MYTSG+TG PKG+++ +  ++A +          G    ++ +  +    H+ +   E+     GC   ++   +  D++S
Sbjct:   47 KAKPTSD-KP--GSPYRSVTHFDSLAVIDIPGADTLDKLFDHAVAKFGKKDSLGTREILSEENEMQPNGKVFKKLILGNYKWINYLEVNCRVNNFGSGLTALGLKPKNTIAIFCETRAEWMIAAQTCFKYNFPLVTLYATLGREAVVHGLNESEASYLITSVELLESKLKAALVDINCVKHIIYVDNKTINRAEYPEGLEIHSMQSVEELGAKPENLSVPPSRPTPSDMAIVMYTSGSTGRPKGLMMHHTNLIAGMTGQCERIPGLG---PKDTYIGYLPLAHVLELTAEISCFTYGCRIGYSSPLTLSDQSS 353          
BLAST of EY656638 vs. ExPASy Swiss-Prot
Match: LCFH_HAEIN (Putative long-chain-fatty-acid--CoA ligase OS=Haemophilus influenzae GN=HI0002 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.061e-15
Identity = 66/221 (29.86%), Postives = 107/221 (48.42%), Query Frame = 2
Query:  242 WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT------LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNXAIVAEVLSVDXMFVVTGKVCSEEEHTSHPSXGHIYDQIIELIAXHRG 883
            W  +QE  +   R   A+ +  ++  D+  I+  N   W I+ +     +AIT VP+Y T  A   EFI+NHA+V I FV + +       +   C  L+ IV+  +    Q+       +SC +WE F++ G+      L   L  K+ +++ TI+YTSGTTGEPKGV+L    +  ++ + D    VT     ++   S     HI+++       HRG
Sbjct:   45 WKNFQEQLNQLSR---ALLAHNIDVQDKIAIFAHNMERWTIVDIATLQIRAIT-VPIYATNTAQQAEFILNHADVKILFVGDQEQYDQTLEIAHHCPKLQKIVAMKSTIQLQQDP-----LSC-TWESFIKTGSNAQQDELTQRLNQKQLSDLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVT----DQDISLSFLPFSHIFERAWAAYILHRG 251          
BLAST of EY656638 vs. ExPASy Swiss-Prot
Match: LCF2_YEAST (Long-chain-fatty-acid--CoA ligase 2 OS=Saccharomyces cerevisiae GN=FAA2 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.173e-14
Identity = 74/275 (26.91%), Postives = 122/275 (44.36%), Query Frame = 2
Query:   14 RPETYTVKVEEARPAADGKPSAGPVYRCIYAKDGLLES-PVGLESPWQFFCDSAKRIPNNQMLGRRKVSDGKVGPYV----WLTYQEVYDAAIRFGSAM-------RSRGVNPGDRC-GIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEE--LGVSC---------FSWEEFLQLGTLDCELP--PKKKTNISTIMYTSGTTGEPKGVVLTNXAIVAEV 760
            R +T+  K   A    D +     +YR   + + L+      L + +  F  SA+R P    LG R + D   G +     + +Y  V       GS +       R R +   D    I   N PEWI+   AC + ++T   LY+TLG N  E+I+N  E  I    ++ +  +L  +P    ++ T+V    ++  + +   E  L V C         FS E+  Q+G  + ++P  P    ++ TI +TSGTTG PKGV +++  I + +
Sbjct:   50 RYKTFLKKQAVAISNPDNEAGFSSIYRSSLSSENLVSCVDKNLRTAYDHFMFSARRWPQRDCLGSRPI-DKATGTWEETFRFESYSTVSKRCHNIGSGILSLVNTKRKRPLEANDFVVAILSHNNPEWILTDLACQAYSLTNTALYETLGPNTSEYILNLTEAPILIFAKSNMYHVLKMVPD-MKFVNTLVCMDELTHDELRMLNESLLPVKCNSLNEKITFFSLEQVEQVGCFN-KIPAIPPTPDSLYTISFTSGTTGLPKGVEMSHRNIASGI 321          
BLAST of EY656638 vs. ExPASy Swiss-Prot
Match: LCF1_YEAST (Long-chain-fatty-acid--CoA ligase 1 OS=Saccharomyces cerevisiae GN=FAA1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.002e-14
Identity = 61/264 (23.11%), Postives = 118/264 (44.70%), Query Frame = 2
Query:  173 KRIPNNQMLGRRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGD--RCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEEL----------------GVSCFSWEEFLQLGTLDC---ELPPKKKTNISTIMYTSGTTGEPKGVVLTNXAIVAEVLSVDXMFVVTGKVCSEEEHTSHPSXGHIYDQIIELIAXHRGCHXDFA 901
            K++   +    +K    ++  Y + ++ ++ D     G  +   G+ P D  +  +Y +   +W+       SQ I  V  YDTLG   +   +        F   + +PS++  + +    +K I+ F ++SS  ++++ ++                 +  FS+++ L+LG   C   ++ P  K ++  IMYTSG+TGEPKGVVL +  +VA V        V   V + +         HI++ + EL++ + G    +A
Sbjct:   76 KKVDGKETSVEKKWMYYELSHYHYNSFDQLTDIMHEIGRGLVKIGLKPNDDDKLHLYAATSHKWMKMFLGAQSQGIPVVTAYDTLGEKGLIHSLVQTGSKAIFTDNSLLPSLIKPV-QAAQDVKYIIHFDSISSEDRRQSGKIYQSAHDAINRIKEVRPDIKTFSFDDILKLGKESCNEIDVHPPGKDDLCCIMYTSGSTGEPKGVVLKHSNVVAGVGGAS--LNVLKFVGNTDRVICFLPLAHIFELVFELLSFYWGACIGYA 336          
BLAST of EY656638 vs. ExPASy Swiss-Prot
Match: ACBG2_RAT (Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Rattus norvegicus GN=Acsbg2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.606e-14
Identity = 59/217 (27.19%), Postives = 104/217 (47.93%), Query Frame = 2
Query:  245 LTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ-ENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT------LDCELPPKKKTNISTIMYTSGTTGEPKGVVLT--NXAIVAEVLSVDXMFV-VTGKVCSEEEHTSHPSXGHIYDQIIEL 865
            LT+ + YD   +   ++   G+      GI G N  EW++A           V +Y T  A A +++I  A V++  V+ + ++  ILS  P     +K IV +       +    E   + +SW++F++LG       LD  +  +K    + I+YTSGTTG PKGV+L+  N    A  ++ +   + V+GK   ++   S+    HI  Q++++
Sbjct:   77 LTFSQYYDVCRKAARSLIKLGLQRFHGVGILGFNSVEWVVAALGAILAGGLCVGIYATNSAEACQYVIKQANVNVLIVENDQQLQKILSIPPDKMETVKAIVQY-------RLPLMENSTNLYSWQDFMELGNAIPNIQLDRVILSQKANQCAVIIYTSGTTGSPKGVMLSHDNITWTAGAMAREIELIHVSGK---QDTIVSYLPLSHIAAQLMDI 283          
BLAST of EY656638 vs. ExPASy Swiss-Prot
Match: ACBG2_HUMAN (Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Homo sapiens GN=ACSBG2 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.695e-13
Identity = 64/254 (25.20%), Postives = 113/254 (44.49%), Query Frame = 2
Query:  134 GLESPW---QFFCDSAKRIPNNQMLGRRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY-LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT------LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNXAIVAEVLSVDXMFVVTGKVCSEEEHTSHPSXGHIYDQIIEL 865
            G E+P    +FF +S  R      L  +     ++     L + + Y+A  +   ++   G+      GI G N  EW I            V +Y T  A A +++I HA+V+I  V+ ++    +  +P+  L  LK I+ +                + +SW++F++LG       L+  +  +K    + ++YTSGTTG PKGV+L++  I     +V   F +T K    E   S+    HI  Q++++
Sbjct:   46 GHETPMTIPEFFRESVNRFGTYPALASKNGKKWEI-----LNFNQYYEACRKAAKSLIKLGLERFHGVGILGFNSAEWFITAVGAILAGGLCVGIYATNSAEACQYVITHAKVNILLVENDQQLQKILSIPQSSLEPLKAIIQYRLPMKKNN--------NLYSWDDFMELGRSIPDTQLEQVIESQKANQCAVLIYTSGTTGIPKGVMLSHDNITWIAGAVTKDFKLTDK---HETVVSYLPLSHIAAQMMDI 283          
BLAST of EY656638 vs. ExPASy Swiss-Prot
Match: LCF4_YEAST (Long-chain-fatty-acid--CoA ligase 4 OS=Saccharomyces cerevisiae GN=FAA4 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.890e-13
Identity = 62/236 (26.27%), Postives = 108/236 (45.76%), Query Frame = 2
Query:  233 PYVWLTYQEVYDAAIRFGSAMRSRGVNPG--DRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEEL----------------GVSCFSWEEFLQLGTL---DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNXAIVAEVLSVDXMFVVTGKVCSEEEHTSHPSXGHIYDQIIELIAXH 877
            PY+ +TY+E+       G  +   GV P   ++  I+ S   +W+     C SQ I  V  YDTLG + +   +   + S+A   +N++ S L+   +    +K ++    +  S K++  +L                 +  +S++E +++G     + EL   K  + + IMYTSG+TG PKGVVLT+  IVA +  V     V G +   +   +     HI++   E  A +
Sbjct:   96 PYITMTYEEMICVMHDIGRGLIKIGVKPNGENKFHIFASTSHKWMKTFLGCMSQGIPVVTAYDTLGESGLIHSMVETD-SVAIFTDNQLLSKLAVPLKTAKNVKFVIHNEPIDPSDKRQNGKLYKAAKDAVDKIKEVRPDIKIYSFDEIIEIGKKAKDEVELHFPKPEDPACIMYTSGSTGTPKGVVLTHYNIVAGIGGVGHN--VIGWIGPTDRIIAFLPLAHIFELTFEFEAFY 328          
BLAST of EY656638 vs. ExPASy Swiss-Prot
Match: ACBG2_XENLA (Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Xenopus laevis GN=acsbg2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.447e-12
Identity = 58/217 (26.73%), Postives = 95/217 (43.78%), Query Frame = 2
Query:  245 LTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK----IPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT------LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNXAIVAEVLSVDXMFVVTGKVCSEEEHTSHPSXGHIYDQIIEL 865
            ++Y++ Y+            G+      GI G N  EW IA           V +Y T  A A  ++  + E +I  V+  K    I  +   LP    +LK I+ +       K E +E   + ++W+EF+QLG       LD  +  +K     T++YTSGTTG+PKGV+L++  I     +      +      +E   S+    HI  Q+I++
Sbjct:  138 MSYKQYYEQCRIAAKGFIKLGLERYHGVGILGFNSAEWFIADVGAIFAGGFAVGIYTTNSAEACHYVAQNCEANIIVVENQKQLQKILQVQDQLP----HLKAIIQY-------KDELKEKRPNLYTWKEFMQLGKDIPDSQLDQIISSQKPNQCCTLIYTSGTTGQPKGVMLSHDNITWTAAAAGKTVRLREATDLQEIVVSYLPLSHIAAQMIDI 343          
BLAST of EY656638 vs. ExPASy Swiss-Prot
Match: ACBG2_MOUSE (Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Mus musculus GN=Acsbg2 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.447e-12
Identity = 61/215 (28.37%), Postives = 99/215 (46.05%), Query Frame = 2
Query:  134 GLESPW---QFFCDSAKRIPNNQMLGRRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ-ENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT------LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNXAI 748
            G E+P    + F +SA+R      L  +   +GK   +  LT+ + Y+   +   ++   G+      GI G N  EW++            V +Y T  A A +++I  A VSI  V+ + ++  IL   P     +K IV +       K    E   + +SW +F++LG       LD  +  +K    + I+YTSGTTG PKGV+L++  I
Sbjct:   42 GHETPMTIPELFQESAERFSAYPALASK---NGK--KWDTLTFSQYYEMCRKAAKSLIKLGLQRFQCVGILGFNSVEWVVTALGTILAGGLCVGIYATNSAEACQYVIQQANVSILIVENDQQLQKILLIPPDKMETVKAIVQY-------KLPLMESMANLYSWNDFMELGNDIPNIQLDRVILSQKANQCAVILYTSGTTGTPKGVLLSHDNI 244          
BLAST of EY656638 vs. ExPASy Swiss-Prot
Match: LCF3_YEAST (Long-chain-fatty-acid--CoA ligase 3 OS=Saccharomyces cerevisiae GN=FAA3 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.298e-12
Identity = 57/239 (23.85%), Postives = 106/239 (44.35%), Query Frame = 2
Query:  224 KVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGD--RCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEEL----------------GVSCFSWEEFLQLGTL---DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNXAIVAEVLSVDXMFVVTGKVCSEEEHTSHPSXGHIYDQIIELIAXH 877
            ++ PY  +TYQE+       G  +   G+ P    +  I+ S   +W+     C SQ I  V  YDTLG + +   +   E +  F     +  ++  L +    +K ++    +  + +++  +L                 +  +S+EE +++G     + +L P +  +++ IMYTSG+   PKGVVLT+  IV+ +  V     V G + S +   S     HI++ + E  A +
Sbjct:   93 EMSPYKMMTYQELIWVMHDMGRGLAKIGIKPNGEHKFHIFASTSHKWMKIFLGCISQGIPVVTAYDTLGESGLIHSMVETESAAIFTDNQLLAKMIVPL-QSAKDIKFLIHNEPIDPNDRRQNGKLYKAAKDAINKIREVRPDIKIYSFEEVVKIGKKSKDEVKLHPPEPKDLACIMYTSGSISAPKGVVLTHYNIVSGIAGVGHN--VFGWIGSTDRVLSFLPLAHIFELVFEFEAFY 328          
The following BLAST results are available for this feature:
BLAST of EY656638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
ACSL4_MOUSE5.628e-1724.28Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculu... [more]
LCFH_HAEIN1.061e-1529.86Putative long-chain-fatty-acid--CoA ligase OS=Haem... [more]
LCF2_YEAST1.173e-1426.91Long-chain-fatty-acid--CoA ligase 2 OS=Saccharomyc... [more]
LCF1_YEAST2.002e-1423.11Long-chain-fatty-acid--CoA ligase 1 OS=Saccharomyc... [more]
ACBG2_RAT7.606e-1427.19Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Rattus... [more]
ACBG2_HUMAN1.695e-1325.20Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Homo s... [more]
LCF4_YEAST2.890e-1326.27Long-chain-fatty-acid--CoA ligase 4 OS=Saccharomyc... [more]
ACBG2_XENLA2.447e-1226.73Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Xenopu... [more]
ACBG2_MOUSE2.447e-1228.37Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Mus mu... [more]
LCF3_YEAST9.298e-1223.85Long-chain-fatty-acid--CoA ligase 3 OS=Saccharomyc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-123-A07-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY656638 ID=EY656638; Name=EY656638; organism=Citrus sinensis; type=EST; length=935bp
TTCTCGACCCACGCGTCCGGAGACCTATACTGTCAAAGTTGAAGAAGCAA
GGCCTGCTGCCGATGGCAAGCCGTCGGCCGGCCCGGTTTATCGGTGCATT
TATGCGAAAGATGGGTTACTAGAGTCACCGGTCGGTTTGGAGTCTCCATG
GCAGTTTTTTTGTGATTCTGCCAAAAGGATTCCAAATAACCAAATGCTGG
GTCGACGCAAAGTCAGTGACGGAAAGGTTGGTCCTTATGTGTGGCTCACA
TACCAAGAGGTCTATGATGCTGCGATTCGTTTCGGTTCCGCCATGAGGAG
CCGTGGTGTCAATCCTGGAGATCGTTGCGGTATTTATGGATCTAATTGCC
CTGAATGGATTATAGCTATGGAGGCTTGTAATAGCCAGGCCATAACGTAT
GTACCACTATATGACACCCTAGGTGCTAATGCGGTGGAGTTCATCATCAA
TCATGCTGAAGTTTCAATAGCTTTTGTTCAGGAGAACAAAATCCCTTCTA
TTCTATCTTGCCTTCCAAGGTGTTGTTTGTACTTAAAAACTATTGTCAGC
TTTGCAAATGTTTCTAGCTCACAGAAGAAGGAAGCTGAAGAACTTGGGGT
CTCTTGCTTTTCTTGGGAGGAATTTCTACAGTTGGGAACTCTGGATTGTG
AACTTCCACCGAAAAAGAAGACCAACATTTCCACAATAATGTATACAAGT
GGAACAACAGGAGAACCTAAAGGTGTCGTTCTCACTAATCANGCTATTGT
AGCAGAAGTACTGAGTGTCGACCNAATGTTTGTGGTTACGGGCAAAGTGT
GTTCAGAAGAGGAACATACTTCTCATCCTTCCTTNGGCCATATATATGAT
CAGATCATTGAACTCATTGCATNCCACAGGGGGTGTCATANGGATTTTGC
AGGCGATGNNTCGTATTTTGATGAGACATCAGGAC
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