EY656636

Overview
NameEY656636
Unique NameEY656636
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY656636 vs. ExPASy Swiss-Prot
Match: TPS2_CANSA ((+)-alpha-pinene synthase, chloroplastic OS=Cannabis sativa PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.836e-20
Identity = 55/137 (40.15%), Postives = 88/137 (64.23%), Query Frame = 2
Query:  332 KKLEVIKHILIKLGDDDSFEGLAMIDVVQRLGIDYYFQDEIELILRRQYSIFFTDGDRYNDLQEVALRFRLLRQQGYYVSADVFNRFRNKEGEFKQNI-SEDINGLMSLYEASQLSIGGEDGLDEAGHFSATHLANY 739
            K  E +K +L+  G ++S   L +ID +QRLGI Y+F++EI  IL+  ++   T+ +   DL   AL FRLLR+ GY +  ++FN F+++ G+FK +I ++DI G+++LYEAS     GE+ L+EA  F+  +L  Y
Sbjct:  104 KLKEEVKKMLV--GMENSLVQLELIDTLQRLGISYHFENEIISILKEYFTNISTNKNPKYDLYATALEFRLLREYGYAIPQEIFNDFKDETGKFKASIKNDDIKGVLALYEASFYVKNGENILEEARVFTTEYLKRY 238          
BLAST of EY656636 vs. ExPASy Swiss-Prot
Match: AMS1_ARTAN (Amorpha-4,11-diene synthase OS=Artemisia annua GN=AMS1 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.154e-19
Identity = 50/113 (44.25%), Postives = 78/113 (69.03%), Query Frame = 2
Query:  395 LAMIDVVQRLGIDYYFQDEIELILRRQYSIFFTDGDRYNDLQEVALRFRLLRQQGYYVSADVFNRFRNKEGEFKQNISEDINGLMSLYEASQLSIGGEDGLDEAGHFSATHLA 733
            L +ID +QRLGI Y+F+ EI+  L+    I+ T GD +N     +L FRL+R+QGYYV+ DVFN +++K G FKQ+++ D+ GL+ LYEA+ + + GE  L++A  F+ + L+
Sbjct:   64 LKLIDEIQRLGIPYHFEREIDHALQ---CIYETYGDNWNG-DRSSLWFRLMRKQGYYVTCDVFNNYKDKNGAFKQSLANDVEGLLELYEATSMRVPGEIILEDALGFTRSRLS 172          
BLAST of EY656636 vs. ExPASy Swiss-Prot
Match: CASS_RICCO (Casbene synthase, chloroplastic OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.968e-19
Identity = 53/132 (40.15%), Postives = 88/132 (66.67%), Query Frame = 2
Query:  347 IKHILIKLGDDDSFEGLAMIDVVQRLGIDYYFQDEIELILRRQYSIFFTDGDRYN----DLQEVALRFRLLRQQGYYVSADVFNRFRNKEGEFKQNISEDINGLMSLYEASQLSIGGEDGLDEAGHFSATHL 730
            +K ILI     DS E + +ID++ RLG+ Y+F+++IE +L +   IF +  D  +    DL   A+ FR+ RQ G+ +S+DVF++F++ +G+FK+++  D  G++SL+EAS LS+ GED L+EA  F+  +L
Sbjct:  102 VKDILIS-STSDSVETVILIDLLCRLGVSYHFENDIEELLSK---IFNSQPDLVDEKECDLYTAAIVFRVFRQHGFKMSSDVFSKFKDSDGKFKESLRGDAKGMLSLFEASHLSVHGEDILEEAFAFTKDYL 229          
BLAST of EY656636 vs. ExPASy Swiss-Prot
Match: HUMS_ARATH (Alpha-humulene/(-)-(E)-beta-caryophyllene synthase OS=Arabidopsis thaliana GN=TPS21 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 9.769e-19
Identity = 64/196 (32.65%), Postives = 105/196 (53.57%), Query Frame = 2
Query:  323 KHAKKLEVIKHILIKLGDDDSFEGLAMIDVVQRLGIDYYFQDEIELILRRQYSIF-FTDGDRYN--DLQEVALRFRLLRQQGYYVSADVFNRFRNKEGEFKQNISEDINGLMSLYEASQLSIGGEDGLDEAGHFSATHL------ANYDLAGVVEHLLLHPYRKSLSPXKTFS-MAXFKAVIYLDTGFAELAIMDF 880
            KH+   E +K   +     +  E +  ID + RLG+ Y+F+ +I   L + +    F    R    DL  V + F++ RQ G+ +SADVF +F+++ G+FK ++  D  G++SLYEA+Q    GED +DEA  FS +HL      ++  LA  +++ L HPY K +S  +T   ++ ++     D    E A +DF
Sbjct:   37 KHSTLKEAVKEAFMS-SKANPIENIKFIDALCRLGVSYHFEKDIVEQLDKSFDCLDFPQMVRQEGCDLYTVGIIFQVFRQFGFKLSADVFEKFKDENGKFKGHLVTDAYGMLSLYEAAQWGTHGEDIIDEALAFSRSHLEEISSRSSPHLAIRIKNALKHPYHKGISRIETRQYISYYEEEESCDPTLLEFAKIDF 231          
BLAST of EY656636 vs. ExPASy Swiss-Prot
Match: RLC1_CITLI ((R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.406e-17
Identity = 56/146 (38.36%), Postives = 86/146 (58.90%), Query Frame = 2
Query:  293 SSNFNDDIHIKHAKKLEVIKHILIKLGDDDSFEGLAMIDVVQRLGIDYYFQDEIELILRRQYSIFFTDGDRYNDLQEVALRFRLLRQQGYYVSADVFNRFRNKEGEFKQNISEDINGLMSLYEASQLSIGGEDGLDEAGHFSATHL 730
            +SN+ D+ + + A++L     I IK    +  + L +ID +QRLG+ + F+ EI  IL   Y+       R  +L   +L FRLLRQ GY VS +VFN F++ +G F   I +D  G++SL+EAS  S+ GE  ++EA  F++ HL
Sbjct:   72 NSNYTDEAYKRRAEELRGKVKIAIK-DVIEPLDQLELIDNLQRLGLAHRFETEIRNILNNIYNNNKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFNGFKDDQGGF---ICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHL 213          
BLAST of EY656636 vs. ExPASy Swiss-Prot
Match: SSS_SALOF ((+)-sabinene synthase, chloroplastic OS=Salvia officinalis PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.560e-16
Identity = 58/157 (36.94%), Postives = 88/157 (56.05%), Query Frame = 2
Query:  272 FTYPSEHSSNFNDDIHIKHAKKLEVIKHILIKLGDDDSFEGLAMIDVVQRLGIDYYFQDEIELILRRQYSIFFTDGDRY---NDLQEVALRFRLLRQQGYYVSADVFNRFR-NKEGEFKQNISEDINGLMSLYEASQLSIGGEDGLDEAGHFSATHL 730
            F Y    ++ + +  H     +L +   +L+K+   ++ + L +ID +Q LG+ Y+FQDEI+ IL   ++       RY   NDL   AL FR+LRQ G+ VS DVF+ F+  K  +F  N+++D  G++ LYEAS L   GED L+ A  FS   L
Sbjct:   64 FNYIQSLNTPYKEQRHFNRQAELIMQVRMLLKV-KMEAIQQLELIDDLQYLGLSYFFQDEIKQILSSIHN-----EPRYFHNNDLYFTALGFRILRQHGFNVSEDVFDCFKIEKCSDFNANLAQDTKGMLQLYEASFLLREGEDTLELARRFSTRSL 214          
BLAST of EY656636 vs. ExPASy Swiss-Prot
Match: TPS02_ARATH (Probable terpenoid synthase 2, chloroplastic OS=Arabidopsis thaliana GN=TPS02 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.320e-15
Identity = 48/117 (41.03%), Postives = 68/117 (58.12%), Query Frame = 2
Query:  389 EGLAMIDVVQRLGIDYYFQDEIELILRRQYSIFFTDGDRYNDLQEVALRFRLLRQQGYYVSADVFNRFRNKEGEFKQNISEDINGLMSLYEASQLSIGGEDGLDEAGHFSATHLANY 739
            E L MID +QRLGI Y+++ EI  ILR+ +           DL   +L F LLRQ G+ VS D F+ F ++ GEF++ +  DI GL+SLYEAS  S+  E  L E   ++   L+ +
Sbjct:  108 EELEMIDSLQRLGISYHYKHEIHDILRKIHDQHGEIERETQDLHATSLEFILLRQHGFDVSQDAFDVFISETGEFRKTLHSDIKGLLSLYEASYFSMDSEFKLKETRIYANKRLSEF 224          
BLAST of EY656636 vs. ExPASy Swiss-Prot
Match: SCS_SALOF (1,8-cineole synthase, chloroplastic OS=Salvia officinalis PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.320e-15
Identity = 68/206 (33.01%), Postives = 112/206 (54.37%), Query Frame = 2
Query:  296 SNFNDDIHIKHAKKLEVIKHILIKLGDDDSFEGLAMIDVVQRLGIDYYFQDEIELILRRQYSIFFTDGD-RYNDLQEVALRFRLLRQQGYYVSADVFNRFRNKEG-EFKQNISEDINGLMSLYEASQLSIGGEDGLDEAGHFSATHL-------ANYDLAGVVEHLLLHP--YRKSLSPXKTFSMAXFKAVIYLDTGFAELAIMDF 880
            S + ++ H+  A  +    ++L++  + DS + L +ID ++RLGI  +F  EI  IL  +Y   +T+ +   +DL   ALRF+LLRQ  + VS +VF+ F+N +G +FK ++ +D  GL+ LYEAS LS  GE+ L  A  F+   L        + +L   +E  L  P  +R  +   ++F  A +K    ++    ELA +DF
Sbjct:   77 SEYKEEKHLMRAAGMIAQVNMLLQ-EEVDSIQRLELIDDLRRLGISCHFDREIVEILNSKY---YTNNEIDESDLYSTALRFKLLRQYDFSVSQEVFDCFKNDKGTDFKPSLVDDTRGLLQLYEASFLSAQGEETLHLARDFATKFLHKRVLVDKDINLLSSIERALELPTHWRVQMPNARSFIDA-YKRRPDMNPTVLELAKLDF 277          
BLAST of EY656636 vs. ExPASy Swiss-Prot
Match: GBIS2_ARATH ((Z)-gamma-bisabolene synthase 2 OS=Arabidopsis thaliana GN=TPS13 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.724e-15
Identity = 54/171 (31.58%), Postives = 96/171 (56.14%), Query Frame = 2
Query:  335 KLEVIKHILIKLGDDDSFEGLAMIDVVQRLGIDYYFQDEIELILRRQYS-IFFTDGDRYNDLQEVALRFRLLRQQGYYVSADVFNRFRNKEGEFKQNISEDINGLMSLYEASQLSIGGEDGLDEAGHFSATHLANYDLAGVVEHLLLHPYRKSLSPXKTFSMAXFKAVIYL 844
            K EV K +  K  D+ S   + +I  +  LG+ ++F++EI+ IL   +  I    GD  NDL  +++ FR+ R  G+ + + VF RF   +G+F+++++ED  G++SLYEA+ L    +  LDEA  F+++HL +  + G+    +L   R +L   + ++M    A  Y+
Sbjct:   47 KPEVRKLLSSKGDDETSKRKVLLIQSLLSLGLAFHFENEIKDILEDAFRRIDDITGDE-NDLSTISIMFRVFRTYGHNLPSSVFKRFTGDDGKFERSLTEDAKGILSLYEAAHLGTTTDYILDEALEFTSSHLKSLLVGGMCRPHILRLIRNTLYLPQRWNMEAVIAREYI 216          
BLAST of EY656636 vs. ExPASy Swiss-Prot
Match: BPPS_SALOF ((+)-bornyl diphosphate synthase, chloroplastic OS=Salvia officinalis PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.252e-15
Identity = 54/151 (35.76%), Postives = 87/151 (57.62%), Query Frame = 2
Query:  278 YPSEHSSNFNDDIHIKHAKKLEVIKHILIKLGDDDSFEGLAMIDVVQRLGIDYYFQDEIELILR---RQYSIFFTDGDRYNDLQEVALRFRLLRQQGYYVSADVFNRFRNKEG-EFKQNISEDINGLMSLYEASQLSIGGEDGLDEAGHFS 718
            Y    ++ + ++ H+    +L V   IL+K    +  + L +I  ++ LG+  +FQDEI+ IL     ++  F  +     DL   AL FRLLRQ G+ +S DVFN F+N++G +FK ++++D  G++ LYEAS L   GED L+ A  F+
Sbjct:   69 YIQSLNTPYTEERHLDRKAELIVQVRILLK-EKMEPVQQLELIHDLKYLGLSDFFQDEIKEILGVIYNEHKCFHNNEVEKMDLYFTALGFRLLRQHGFNISQDVFNCFKNEKGIDFKASLAQDTKGMLQLYEASFLLRKGEDTLELAREFA 218          
The following BLAST results are available for this feature:
BLAST of EY656636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
TPS2_CANSA8.836e-2040.15(+)-alpha-pinene synthase, chloroplastic OS=Cannab... [more]
AMS1_ARTAN1.154e-1944.25Amorpha-4,11-diene synthase OS=Artemisia annua GN=... [more]
CASS_RICCO1.968e-1940.15Casbene synthase, chloroplastic OS=Ricinus communi... [more]
HUMS_ARATH9.769e-1932.65Alpha-humulene/(-)-(E)-beta-caryophyllene synthase... [more]
RLC1_CITLI2.406e-1738.36(R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1[more]
SSS_SALOF1.560e-1636.94(+)-sabinene synthase, chloroplastic OS=Salvia off... [more]
TPS02_ARATH1.320e-1541.03Probable terpenoid synthase 2, chloroplastic OS=Ar... [more]
SCS_SALOF1.320e-1533.011,8-cineole synthase, chloroplastic OS=Salvia offi... [more]
GBIS2_ARATH1.724e-1531.58(Z)-gamma-bisabolene synthase 2 OS=Arabidopsis tha... [more]
BPPS_SALOF2.252e-1535.76(+)-bornyl diphosphate synthase, chloroplastic OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-123-A05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY656636 ID=EY656636; Name=EY656636; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGGCTTCACTTATTCTTCATATTCTCGACTTATTAGAACCA
ATTCTCTCTTTTCTGTCAAGATTAGCTATTTCCACGAATACACACTTTCC
ATGGCTTTCTCTTCCAAAGATATTTCGTCTGATTCATCCCACATTCAAGT
TATTCCAAAACACATATCAAAAGTTGGCAACCGAAACCTCAATAACATTA
ATTCTTTGCTGCCTAATAATAAAAAGGGCAACATTAATGATAACATAGGT
GTTTCTGCCCGGTTGAAACGTTTCACTTATCCCAGTGAACACTCCAGTAA
CTTTAATGACGACATTCACATTAAGCATGCGAAAAAACTGGAGGTAATCA
AGCACATACTTATCAAACTAGGAGATGACGATTCTTTTGAAGGATTGGCC
ATGATTGATGTCGTTCAACGCCTAGGGATTGATTACTATTTTCAAGATGA
GATTGAACTAATTCTACGAAGGCAGTATAGCATATTTTTCACTGATGGTG
ATCGCTATAATGACCTTCAAGAGGTTGCCCTTCGCTTTCGACTGTTGAGA
CAACAAGGTTACTATGTGTCTGCAGATGTTTTTAACAGGTTCAGAAACAA
AGAAGGGGAGTTTAAACAGAATATAAGTGAAGACATCAATGGATTGATGA
GCTTATACGAGGCCTCACAGCTAAGTATTGGAGGAGAAGATGGGCTTGAT
GAAGCTGGACACTTTAGTGCGACACATCTTGCTAATTATGATCTAGCGGG
AGTAGTTGAGCATCTGTTGCTGCATCCCTATCGCAAAAGCTTGTCCCCGG
NCAAAACTTTTTCCATGGCANTTTTCAAGGCAGTGATATATTTGGATACT
GGATTTGCAGAACTAGCGATTATGGATTTCAAATGGTCCNATCTTACACC
N
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