EY656636

Overview
NameEY656636
Unique NameEY656636
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY656636 vs. ExPASy Swiss-Prot
Match: TPSD1_GINBI (Levopimaradiene synthase, chloroplastic OS=Ginkgo biloba GN=LPS PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.941e-15
Identity = 60/193 (31.09%), Postives = 95/193 (49.22%), Query Frame = 2
Query:  314 IHIKHAKKLEVIKHILIKLGDD-------DSFEGLAMIDVVQRLGIDYYFQDEIELILRRQYSIFFTDGDR---------YNDLQEVALRFRLLRQQGYYVSADVFNRFRNKEGEFKQNISEDINGL---MSLYEASQLSIGGEDGLDEAGHFSATHLAN--------------YDLAGVVEHLLLHPYRKSL 793
            +H ++ + L  +  +L K GD        D FE L  +D V+RLGID YF+ EI+  L   Y   + D +R           D+ + A+  R+LR  GY VS+DV   FR+++G+F     +   G+   ++LY  SQ+   GE  ++EA  F+  HL N               DL G VE+ + +P+ +S+
Sbjct:  325 MHTQNKRCLHFLNFVLSKFGDYVPCHYPLDLFERLWAVDTVERLGIDRYFKKEIKESL--DYVYRYWDAERGVGWARCNPIPDVDDTAMGLRILRLHGYNVSSDVLENFRDEKGDFFCFAGQTQIGVTDNLNLYRCSQVCFPGEKIMEEAKTFTTNHLQNALAKNNAFDKWAVKKDLPGEVEYAIKYPWHRSM 515          
BLAST of EY656636 vs. ExPASy Swiss-Prot
Match: GBIS1_ARATH ((Z)-gamma-bisabolene synthase 1 OS=Arabidopsis thaliana GN=TPS12 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.941e-15
Identity = 52/168 (30.95%), Postives = 93/168 (55.36%), Query Frame = 2
Query:  347 IKHILIKLGDDD-SFEGLAMIDVVQRLGIDYYFQDEIELILRRQY-SIFFTDGDRYNDLQEVALRFRLLRQQGYYVSADVFNRFRNKEGEFKQNISEDINGLMSLYEASQLSIGGEDGLDEAGHFSATHLANYDLAGVVEHLLLHPYRKSLSPXKTFSMAXFKAVIYL 844
            +  +L   GDD+ S   + +I ++  LG+ ++F++EI+ IL   +  I    GD   DL  +++ FR+ R  G+ + + VF RF   +G+F+Q+++ED  G++SLYEA+ L    +  LDEA  F+++HL +    G     +L   R +L   + ++M    A  Y+
Sbjct:   50 VMELLSSQGDDETSKRKVLLIQLLLSLGLAFHFENEIKNILEHAFRKIDDITGDE-KDLSTISIMFRVFRTYGHNLPSSVFKRFTGDDGKFQQSLTEDAKGILSLYEAAHLGTTTDYILDEALKFTSSHLKSLLAGGTCRPHILRLIRNTLYLPQRWNMEAVIAREYI 216          
BLAST of EY656636 vs. ExPASy Swiss-Prot
Match: KSA_ARATH (Ent-copalyl diphosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=GA1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.907e-14
Identity = 50/126 (39.68%), Postives = 71/126 (56.35%), Query Frame = 2
Query:  380 DSFEGLAMIDVVQRLGIDYYFQDEIELILRRQYSIFFTDG------DRYNDLQEVALRFRLLRQQGYYVSADVFNRFRNKEGEFKQNISED---INGLMSLYEASQLSIGGEDGLDEAGHFSATHL 730
            D FE + ++D +QRLGI  YF++EI+  L   +  +  +G          D+ + A+ FRLLRQ GY VSADVF  F  KEGEF   + +    + G+ +LY ASQL+   E+ L  A  FS  +L
Sbjct:  327 DLFEHIWIVDRLQRLGISRYFEEEIKECLDYVHRYWTDNGICWARCSHVQDIDDTAMAFRLLRQHGYQVSADVFKNF-EKEGEFFCFVGQSNQAVTGMFNLYRASQLAFPREEILKNAKEFSYNYL 451          
BLAST of EY656636 vs. ExPASy Swiss-Prot
Match: TPSD1_ABIGR (Alpha-bisabolene synthase OS=Abies grandis GN=ag1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.614e-13
Identity = 55/155 (35.48%), Postives = 83/155 (53.55%), Query Frame = 2
Query:  314 IHIKHAKKLEVIKHILIKLGDD-------DSFEGLAMIDVVQRLGIDYYFQDEIELILRRQYSIFFTDG---DRYN---DLQEVALRFRLLRQQGYYVSADVFNRFRNKEGEF---KQNISEDINGLMSLYEASQLSIGGEDGLDEAGHFSATHL 730
            +H   AK LE +  ++IK G+        D  E L ++D + RLGI  +F+ EI+  L   Y  +   G    R N   DL+  AL FRLLR   Y VS  +F+ F++  G+F       ++D+  +++LY ASQL+  GE+ LDEA  F+  +L
Sbjct:  268 MHTGDAKCLEFLNSVMIKFGNFVPCLYPVDLLERLLIVDNIVRLGIYRHFEKEIKEALDYVYRHWNERGIGWGRLNPIADLETTALGFRLLRLHRYNVSPAIFDNFKDANGKFICSTGQFNKDVASMLNLYRASQLAFPGENILDEAKSFATKYL 422          
BLAST of EY656636 vs. ExPASy Swiss-Prot
Match: TPSD6_ABIGR (Camphene synthase, chloroplastic OS=Abies grandis GN=ag6 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.596e-13
Identity = 48/130 (36.92%), Postives = 70/130 (53.85%), Query Frame = 2
Query:  371 GDDDSFEGLAMIDVVQRLGIDYYFQDEIELILRRQYSIFFTDG------DRYNDLQEVALRFRLLRQQGYYVSADVFNRFRNKEGEFKQ----NISEDINGLMSLYEASQLSIGGEDGLDEAGHFSATHL 730
            G +D  + L ++D V+RLGID +F+ EI+  L    S +   G          DL   AL  R LR  GY VS+DV N F++K G+F       I  +I G+++L+ AS ++  GE  +DEA  FS  +L
Sbjct:  111 GGNDLLQRLLLVDDVERLGIDRHFKKEIKTALDYVNSYWNEKGIGCGRESVVTDLNSTALGLRTLRLHGYTVSSDVLNVFKDKNGQFSSTANIQIEGEIRGVLNLFRASLVAFPGEKVMDEAETFSTKYL 240          
BLAST of EY656636 vs. ExPASy Swiss-Prot
Match: TPSD3_ABIGR (Pinene synthase, chloroplastic OS=Abies grandis GN=ag3 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13
Identity = 48/128 (37.50%), Postives = 73/128 (57.03%), Query Frame = 2
Query:  377 DDSFEGLAMIDVVQRLGIDYYFQDEIELILRRQYSIFFTDG------DRYNDLQEVALRFRLLRQQGYYVSADVFNRFRNKEGEF--KQNI--SEDINGLMSLYEASQLSIGGEDGLDEAGHFSATHL 730
            +D  + L ++D ++RLGI  +F+DEI+  L   YS +  +G          DL   AL  R LR  GY VS+DVF  F+ + G+F   +NI   E+I G+++L+ AS ++  GE  +DEA  FS  +L
Sbjct:  121 NDLIQRLWIVDSLERLGIHRHFKDEIKSALDYVYSYWGENGIGCGRESVVTDLNSTALGLRTLRLHGYPVSSDVFKAFKGQNGQFSCSENIQTDEEIRGVLNLFRASLIAFPGEKIMDEAEIFSTKYL 248          
BLAST of EY656636 vs. ExPASy Swiss-Prot
Match: MYRS1_ARATH (Myrcene/ocimene synthase 1, chloroplastic OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13
Identity = 48/121 (39.67%), Postives = 72/121 (59.50%), Query Frame = 2
Query:  323 KHAKKLEVIKHILIKLGDDDS---FEGLAMIDVVQRLGIDYYFQDEIELILRRQYSIFFTDGDRYNDLQEVALRFRLLRQQGYYVSADVFNRFRNKEGEFKQNISEDINGLMSLYEASQLS 676
            K  ++ +++K  + K+ +D+     + L  ID +Q+LG+ Y+F+ EI+ IL   Y    T+    +DL   AL FRL RQ G+ VS DVF+ F    G+F +   +DI GL+SLYEAS LS
Sbjct:   72 KRVRERDLLKEKVRKMLNDEQKTYLDQLEFIDDLQKLGVSYHFEAEIDNILTSSYKKDRTNIQE-SDLHATALEFRLFRQHGFNVSEDVFDVFMENCGKFDR---DDIYGLISLYEASYLS 188          
BLAST of EY656636 vs. ExPASy Swiss-Prot
Match: BARS_ARATH (Alpha-barbatene synthase OS=Arabidopsis thaliana GN=BS PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13
Identity = 39/109 (35.78%), Postives = 61/109 (55.96%), Query Frame = 2
Query:  404 IDVVQRLGIDYYFQDEIELILRRQYSIFFTDGDRYNDLQEVALRFRLLRQQGYYVSADVFNRFRNKEGEFKQNISEDINGLMSLYEASQLSIGGEDGLDEAGHFSATHL 730
            I  +  LG+ Y+F+ EIE  L+  +          N L  ++  FR+ R  GYY+S+DVF  F+  +G+FK+++ ED+ G++S YEA       +  LDEA  F+  HL
Sbjct:   73 IHFLDSLGLSYHFEKEIEESLKHAFEKIEDLIADENKLHTISTIFRVFRTYGYYMSSDVFKIFKGDDGKFKESLIEDVKGMLSFYEAVHFGTTTDHILDEALSFTLNHL 181          
BLAST of EY656636 vs. ExPASy Swiss-Prot
Match: TPSDV_ABIGR (Abietadiene synthase, chloroplastic OS=Abies grandis GN=ag22 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.192e-12
Identity = 55/184 (29.89%), Postives = 91/184 (49.46%), Query Frame = 2
Query:  332 KKLEVIKHILIKLGDD-------DSFEGLAMIDVVQRLGIDYYFQDEIELILRRQYSIFFTDG------DRYNDLQEVALRFRLLRQQGYYVSADVFNRFRNKEGEFKQNISEDING---LMSLYEASQLSIGGEDGLDEAGHFSATHLAN--------------YDLAGVVEHLLLHPYRKSL 793
            K L+ +  +L K G+        D FE L  +D V+RLGID +F++EI+  L   YS +   G      +   D+ + A+  R+LR  GY VS+DV   FR++ GEF   + +   G   ++++   S +S  GE  ++EA   +  +L N               ++ G VE+ L +P+ KS+
Sbjct:  329 KCLDFLNFVLKKFGNHVPCHYPLDLFERLWAVDTVERLGIDRHFKEEIKEALDYVYSHWDERGIGWARENPVPDIDDTAMGLRILRLHGYNVSSDVLKTFRDENGEFFCFLGQTQRGVTDMLNVNRCSHVSFPGETIMEEAKLCTERYLRNALENVDAFDKWAFKKNIRGEVEYALKYPWHKSM 512          
BLAST of EY656636 vs. ExPASy Swiss-Prot
Match: TPSD1_PINTA (Levopimaradiene synthase, chloroplastic OS=Pinus taeda GN=LPS PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.192e-12
Identity = 54/184 (29.35%), Postives = 92/184 (50.00%), Query Frame = 2
Query:  332 KKLEVIKHILIKLGDD-------DSFEGLAMIDVVQRLGIDYYFQDEIELILRRQYSIFFTDG------DRYNDLQEVALRFRLLRQQGYYVSADVFNRFRNKEGEFKQNISEDING---LMSLYEASQLSIGGEDGLDEAGHFSATHLAN--------------YDLAGVVEHLLLHPYRKSL 793
            K LE +  +L K G+        D FE L  +D V+RLGID++F++EI+  L   YS +   G      +   D+ + A+  R+LR  GY VS+DV   FR++ GEF   + +   G   ++++   S ++  GE  ++EA   +  +L N               ++ G VE+ L +P+ +S+
Sbjct:  310 KCLEFLNFVLKKFGNHVPCHYPLDLFERLWAVDTVERLGIDHHFKEEIKDALDYVYSHWDERGIGWARENPVPDIDDTAMGLRILRLHGYNVSSDVLKTFRDENGEFFCFLGQTQRGVTDMLNVNRCSHVAFPGETIMEEAKLCTERYLRNALEDGGASDKWALKKNIRGEVEYALKYPWHRSM 493          
The following BLAST results are available for this feature:
BLAST of EY656636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
TPSD1_GINBI2.941e-1531.09Levopimaradiene synthase, chloroplastic OS=Ginkgo ... [more]
GBIS1_ARATH2.941e-1530.95(Z)-gamma-bisabolene synthase 1 OS=Arabidopsis tha... [more]
KSA_ARATH1.907e-1439.68Ent-copalyl diphosphate synthase, chloroplastic OS... [more]
TPSD1_ABIGR1.614e-1335.48Alpha-bisabolene synthase OS=Abies grandis GN=ag1 ... [more]
TPSD6_ABIGR3.596e-1336.92Camphene synthase, chloroplastic OS=Abies grandis ... [more]
TPSD3_ABIGR4.696e-1337.50Pinene synthase, chloroplastic OS=Abies grandis GN... [more]
MYRS1_ARATH4.696e-1339.67Myrcene/ocimene synthase 1, chloroplastic OS=Arabi... [more]
BARS_ARATH4.696e-1335.78Alpha-barbatene synthase OS=Arabidopsis thaliana G... [more]
TPSDV_ABIGR5.192e-1229.89Abietadiene synthase, chloroplastic OS=Abies grand... [more]
TPSD1_PINTA5.192e-1229.35Levopimaradiene synthase, chloroplastic OS=Pinus t... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-123-A05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY656636 ID=EY656636; Name=EY656636; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGGCTTCACTTATTCTTCATATTCTCGACTTATTAGAACCA
ATTCTCTCTTTTCTGTCAAGATTAGCTATTTCCACGAATACACACTTTCC
ATGGCTTTCTCTTCCAAAGATATTTCGTCTGATTCATCCCACATTCAAGT
TATTCCAAAACACATATCAAAAGTTGGCAACCGAAACCTCAATAACATTA
ATTCTTTGCTGCCTAATAATAAAAAGGGCAACATTAATGATAACATAGGT
GTTTCTGCCCGGTTGAAACGTTTCACTTATCCCAGTGAACACTCCAGTAA
CTTTAATGACGACATTCACATTAAGCATGCGAAAAAACTGGAGGTAATCA
AGCACATACTTATCAAACTAGGAGATGACGATTCTTTTGAAGGATTGGCC
ATGATTGATGTCGTTCAACGCCTAGGGATTGATTACTATTTTCAAGATGA
GATTGAACTAATTCTACGAAGGCAGTATAGCATATTTTTCACTGATGGTG
ATCGCTATAATGACCTTCAAGAGGTTGCCCTTCGCTTTCGACTGTTGAGA
CAACAAGGTTACTATGTGTCTGCAGATGTTTTTAACAGGTTCAGAAACAA
AGAAGGGGAGTTTAAACAGAATATAAGTGAAGACATCAATGGATTGATGA
GCTTATACGAGGCCTCACAGCTAAGTATTGGAGGAGAAGATGGGCTTGAT
GAAGCTGGACACTTTAGTGCGACACATCTTGCTAATTATGATCTAGCGGG
AGTAGTTGAGCATCTGTTGCTGCATCCCTATCGCAAAAGCTTGTCCCCGG
NCAAAACTTTTTCCATGGCANTTTTCAAGGCAGTGATATATTTGGATACT
GGATTTGCAGAACTAGCGATTATGGATTTCAAATGGTCCNATCTTACACC
N
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