EY680353

Overview
NameEY680353
Unique NameEY680353
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680353 vs. ExPASy Swiss-Prot
Match: KCAB1_CHICK (Voltage-gated potassium channel subunit beta-1 OS=Gallus gallus GN=KCNAB1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.183e-13
Identity = 59/210 (28.10%), Postives = 98/210 (46.67%), Query Frame = 1
Query:   31 LGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFK--GGFRERAELATK-FGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVH------PITAVQLEWSLWTRD-VEEDIIPTCRELGIGIVAYSPL 630
            LG  GL VS  GLG       +G    +     L+  A  SG+   DT+++Y     E++LG   K  G  R    + TK +  G  + + G      ++     ASL+RL ++ +D+ + +R D  TP+E  +  +  ++ +G   Y G S  SA  I  A++V       P    Q E+ L+ R+ VE  +     ++G+G + +SPL
Sbjct:   76 LGKSGLRVSCLGLGTW---VTFGGQISDEVAEQLMTIAYESGVNLFDTAEVYAAGKAEVILGNILKKKGWRRSSLVITTKLYWGGKAETERGL--SRKHIIEGLRASLQRLQLEYVDVVFANRPDNNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNLIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPL 280          
BLAST of EY680353 vs. ExPASy Swiss-Prot
Match: KCAB1_RAT (Voltage-gated potassium channel subunit beta-1 OS=Rattus norvegicus GN=Kcnab1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.225e-12
Identity = 58/210 (27.62%), Postives = 99/210 (47.14%), Query Frame = 1
Query:   31 LGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAF--KGGFRERAELATK-FGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVH------PITAVQLEWSLWTRD-VEEDIIPTCRELGIGIVAYSPL 630
            LG  GL VS  GLG       +G    +     L+  A  SG+   DT+++Y     E++LG     KG  R    + TK +  G  + + G      ++    + SL+RL ++ +D+ + +R D+ TP+E  +  +  ++ +G   Y G S  SA  I  A++V       P    Q E+ L+ R+ VE  +     ++G+G + +SPL
Sbjct:   76 LGKSGLRVSCLGLGTW---VTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGL--SRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPL 280          
BLAST of EY680353 vs. ExPASy Swiss-Prot
Match: KCAB1_RABIT (Voltage-gated potassium channel subunit beta-1 OS=Oryctolagus cuniculus GN=KCNAB1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.225e-12
Identity = 58/210 (27.62%), Postives = 99/210 (47.14%), Query Frame = 1
Query:   31 LGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAF--KGGFRERAELATK-FGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVH------PITAVQLEWSLWTRD-VEEDIIPTCRELGIGIVAYSPL 630
            LG  GL VS  GLG       +G    +     L+  A  SG+   DT+++Y     E++LG     KG  R    + TK +  G  + + G      ++    + SL+RL ++ +D+ + +R D+ TP+E  +  +  ++ +G   Y G S  SA  I  A++V       P    Q E+ L+ R+ VE  +     ++G+G + +SPL
Sbjct:   94 LGKSGLRVSCLGLGTW---VTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGL--SRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPL 298          
BLAST of EY680353 vs. ExPASy Swiss-Prot
Match: KCAB1_MUSPU (Voltage-gated potassium channel subunit beta-1 OS=Mustela putorius GN=KCNAB1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.225e-12
Identity = 58/210 (27.62%), Postives = 99/210 (47.14%), Query Frame = 1
Query:   31 LGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAF--KGGFRERAELATK-FGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVH------PITAVQLEWSLWTRD-VEEDIIPTCRELGIGIVAYSPL 630
            LG  GL VS  GLG       +G    +     L+  A  SG+   DT+++Y     E++LG     KG  R    + TK +  G  + + G      ++    + SL+RL ++ +D+ + +R D+ TP+E  +  +  ++ +G   Y G S  SA  I  A++V       P    Q E+ L+ R+ VE  +     ++G+G + +SPL
Sbjct:   83 LGKSGLRVSCLGLGTW---VTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGL--SRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPL 287          
BLAST of EY680353 vs. ExPASy Swiss-Prot
Match: KCAB1_MOUSE (Voltage-gated potassium channel subunit beta-1 OS=Mus musculus GN=Kcnab1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.225e-12
Identity = 58/210 (27.62%), Postives = 99/210 (47.14%), Query Frame = 1
Query:   31 LGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAF--KGGFRERAELATK-FGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVH------PITAVQLEWSLWTRD-VEEDIIPTCRELGIGIVAYSPL 630
            LG  GL VS  GLG       +G    +     L+  A  SG+   DT+++Y     E++LG     KG  R    + TK +  G  + + G      ++    + SL+RL ++ +D+ + +R D+ TP+E  +  +  ++ +G   Y G S  SA  I  A++V       P    Q E+ L+ R+ VE  +     ++G+G + +SPL
Sbjct:   76 LGKSGLRVSCLGLGTW---VTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGL--SRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPL 280          
BLAST of EY680353 vs. ExPASy Swiss-Prot
Match: KCAB1_HUMAN (Voltage-gated potassium channel subunit beta-1 OS=Homo sapiens GN=KCNAB1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.225e-12
Identity = 58/210 (27.62%), Postives = 99/210 (47.14%), Query Frame = 1
Query:   31 LGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAF--KGGFRERAELATK-FGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVH------PITAVQLEWSLWTRD-VEEDIIPTCRELGIGIVAYSPL 630
            LG  GL VS  GLG       +G    +     L+  A  SG+   DT+++Y     E++LG     KG  R    + TK +  G  + + G      ++    + SL+RL ++ +D+ + +R D+ TP+E  +  +  ++ +G   Y G S  SA  I  A++V       P    Q E+ L+ R+ VE  +     ++G+G + +SPL
Sbjct:   94 LGKSGLRVSCLGLGTW---VTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGL--SRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPL 298          
BLAST of EY680353 vs. ExPASy Swiss-Prot
Match: KCAB1_BOVIN (Voltage-gated potassium channel subunit beta-1 OS=Bos taurus GN=KCNAB1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.225e-12
Identity = 58/210 (27.62%), Postives = 99/210 (47.14%), Query Frame = 1
Query:   31 LGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAF--KGGFRERAELATK-FGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVH------PITAVQLEWSLWTRD-VEEDIIPTCRELGIGIVAYSPL 630
            LG  GL VS  GLG       +G    +     L+  A  SG+   DT+++Y     E++LG     KG  R    + TK +  G  + + G      ++    + SL+RL ++ +D+ + +R D+ TP+E  +  +  ++ +G   Y G S  SA  I  A++V       P    Q E+ L+ R+ VE  +     ++G+G + +SPL
Sbjct:   76 LGKSGLRVSCLGLGTW---VTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGL--SRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPL 280          
BLAST of EY680353 vs. ExPASy Swiss-Prot
Match: AAD4_YEAST (Probable aryl-alcohol dehydrogenase AAD4 OS=Saccharomyces cerevisiae GN=AAD4 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.600e-12
Identity = 52/173 (30.06%), Postives = 83/173 (47.98%), Query Frame = 1
Query:  151 SGITFLDTSDIYGPHTNEILLGKAFKGG-FRERAELATKF---------GIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRA------HAVHPITAVQLEWSLWTRDVEEDIIPTCRELGIGIVAY 621
            +G   +DT++ Y    +EI +G+  K    R++  +ATKF         G G      G H    +V  +   SL++L  D ID+ Y H  D  + IE  +  L  LV++GK+ Y+G+S+  A  +  A      H   P +  Q +W++  RD E DIIP  R  G+ +  +
Sbjct:   19 AGGNCIDTANSYQNEESEIWIGEWMKSRKLRDQIVIATKFTGDYKKYEVGGGKSANYCGNHKHSLHV--SVRDSLRKLQTDWIDILYVHWWDYMSSIEEVMDSLHILVQQGKVLYLGVSDTPAWVVSAANYYATSHGKTPFSIYQGKWNVLNRDFERDIIPMARHFGMALAPW 189          
BLAST of EY680353 vs. ExPASy Swiss-Prot
Match: ARK73_RAT (Aflatoxin B1 aldehyde reductase member 3 OS=Rattus norvegicus GN=Akr7a3 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.090e-12
Identity = 57/176 (32.39%), Postives = 84/176 (47.73%), Query Frame = 1
Query:  127 ALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKGGFRE--RAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTIGELKKLVEEGKIKYIGLSE------ASASTIRRAHAVHPITAVQLEWSLWTRDVEEDIIPTCRELGIGIVAYSPL 630
            A +R  +  G T +DT+ +Y    +E +LG    G  R   + ++ATK         +G    PA VR   E SLKRL    +DL+Y H  D  TPIE T+    +L +EGK   +GLS       A   T+ + +     T  Q  ++  TR VE ++ P  R  G+   A++PL
Sbjct:   26 ASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGLGRSGCKVKIATKAA-----PMFGKTLKPADVRFQLETSLKRLQCPRVDLFYLHFPDHGTPIEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLCKKNGWIMPTVYQGMYNAITRQVETELFPCLRHFGLRFYAFNPL 196          
BLAST of EY680353 vs. ExPASy Swiss-Prot
Match: YDBC_ECOLI (Putative oxidoreductase ydbC OS=Escherichia coli (strain K12) GN=ydbC PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.730e-12
Identity = 54/203 (26.60%), Postives = 100/203 (49.26%), Query Frame = 1
Query:   52 VSAQGLGCMGMSA--LYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPH-TNEILLGKAFKGGFRERAELATKFGIGI-VDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRI------DTQTPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWTRDVEEDIIPTCRELGIGIVAYSPL 630
            V+  G G M ++   ++GPP+     I ++R A+  G+  +DTSD YGPH TN+I+    +   + +   + TK G     D  +     PA ++ A   +L+ L +D +D+     +        +  IE ++  L ++ ++G +K+IGLS  + + +  A  +  I  VQ E+++  R  ++ +I      GI  V + PL
Sbjct:   13 VNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYGPHVTNQIIREALYP--YSDDLTIVTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLDVLDVVNLRVMMGDGHGPAEGSIEASLTVLAEMQQQGLVKHIGLSNVTPTQVAEARKIAEIVCVQNEYNIAHR-ADDAMIDALAHDGIAYVPFFPL 212          
The following BLAST results are available for this feature:
BLAST of EY680353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
KCAB1_CHICK7.183e-1328.10Voltage-gated potassium channel subunit beta-1 OS=... [more]
KCAB1_RAT1.225e-1227.62Voltage-gated potassium channel subunit beta-1 OS=... [more]
KCAB1_RABIT1.225e-1227.62Voltage-gated potassium channel subunit beta-1 OS=... [more]
KCAB1_MUSPU1.225e-1227.62Voltage-gated potassium channel subunit beta-1 OS=... [more]
KCAB1_MOUSE1.225e-1227.62Voltage-gated potassium channel subunit beta-1 OS=... [more]
KCAB1_HUMAN1.225e-1227.62Voltage-gated potassium channel subunit beta-1 OS=... [more]
KCAB1_BOVIN1.225e-1227.62Voltage-gated potassium channel subunit beta-1 OS=... [more]
AAD4_YEAST1.600e-1230.06Probable aryl-alcohol dehydrogenase AAD4 OS=Saccha... [more]
ARK73_RAT2.090e-1232.39Aflatoxin B1 aldehyde reductase member 3 OS=Rattus... [more]
YDBC_ECOLI2.730e-1226.60Putative oxidoreductase ydbC OS=Escherichia coli (... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-B09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680353 ID=EY680353; Name=EY680353; organism=Citrus sinensis; type=EST; length=843bp
CTGGAAATGGCGACGGTGAGGAGAATGAAGCTGGGTTCACAAGGCCTTGA
AGTATCAGCACAAGGCTTGGGGTGCATGGGCATGTCCGCTTTATACGGTC
CCCCGAAGCCTGAGCCCGATATGATCGCTTTAATCCGCCATGCCATCAAC
AGTGGCATCACTTTTCTTGACACTTCTGATATTTACGGCCCGCACACAAA
TGAAATTCTTCTGGGCAAGGCTTTCAAAGGAGGGTTCAGGGAAAGAGCTG
AATTGGCAACTAAATTTGGAATAGGTATCGTAGATGGTAAGTACGGATAT
CATGGGGATCCTGCTTATGTGAGAGCTGCATGTGAGGCCAGCTTGAAGCG
TCTTGATGTTGATTGTATTGATCTTTATTACCAACATCGCATTGACACTC
AAACTCCCATTGAAGTCACTATTGGAGAACTCAAGAAACTAGTTGAAGAG
GGCAAAATAAAGTATATTGGACTGTCTGAGGCTTCTGCCTCAACAATTAG
ACGAGCTCATGCTGTTCATCCAATAACAGCTGTGCAGTTGGAATGGTCCT
TATGGACACGAGATGTAGAGGAAGACATAATTCCTACTTGCAGGGAACTC
GGCATTGGGATTGTTGCGTACAGTCCTCTAGGACGAGGATTCTTTTCATC
AAGGTCTAAGTTGGGCTGAAGCTTATCAAAGGGAAAATTAAAAAAGCACC
TACAAAGATTCCGCCCTGGAAAATTGGGAGCAAAACCAAAAGCTAATTGG
AATGGGGTTAAAGAAAAAACTGGCCAAAAAAGGGGGGGCCCCCCATCCCA
ACTTGGCATTTACCCCGGGGTTCACCCCCCAAGGAAAAAAAAT
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