EY675132

Overview
NameEY675132
Unique NameEY675132
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYC_CANAL (Serine hydroxymethyltransferase, cytosolic OS=Candida albicans GN=SHM2 PE=1 SV=3)

HSP 1 Score: 212.616 bits (540), Expect = 2.958e-54
Identity = 119/261 (45.59%), Postives = 158/261 (60.54%), Query Frame = 2
Query:   98 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGG----PFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGGDRFLPPGKGPLN 868
            L+  DPE+  +I+ E  RQ   I LIASENFT+ AV +ALG+ + NKYSEG PG RYYGGNE I  +E LC+ RAL+ F L P +WGVNVQ  SGSPAN   Y A+++PH+R+MGLDLP GGHL+HGY T   +KISA S   E++PY+V+  TG IDY+ LE+ A+ +R K+++ G SA  R  +Y + +  A+K G       A   GL +   +  P     ++ T        T  K   GPRG   F   G   +N
Sbjct:   18 LKDTDPEVDQIIKDEIDRQQHSIVLIASENFTTTAVFDALGTPMCNKYSEGYPGARYYGGNEHIHRMELLCQERALKAFGLTPDKWGVNVQTLSGSPANLQVYQAIMKPHERLMGLDLPHGGHLSHGYQTD-SRKISAVSTYFETMPYRVDLETGLIDYDMLEKTAVLYRPKVLVAGTSAYCRLIDYKRMREIADKVGAYLVVDMAHISGLIAAGVIPSPFEYADIVTT--------TTHKSLRGPRGAMIFFRRGVRSVN 269          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYC_ASHGO (Serine hydroxymethyltransferase, cytosolic OS=Ashbya gossypii GN=SHM2 PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.958e-54
Identity = 119/259 (45.95%), Postives = 156/259 (60.23%), Query Frame = 2
Query:   89 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGG----PFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGGDRFLPPG 853
            +S L   DPE+  +I+ E  RQ   I LIASEN TS AV +ALG+ + NKYSEG PG RYYGGN+ ID +E LC+ RAL+ FH+ P +WGVNVQ  SGSPAN   Y A+++PH+R+MGL LP GGHL+HGY T   +KISA S   ES PY+V+  TG IDY+ LE+ A+ +R K+++ G SA  R  +Y + +  A+K G       A   GL +   +  P     ++ T        T  K   GPRG   F   G
Sbjct:   14 SSHLSESDPEVDAIIKDEIDRQKHSIVLIASENLTSTAVFDALGTPMCNKYSEGYPGARYYGGNQHIDRMELLCQRRALEAFHVTPDRWGVNVQSLSGSPANLQVYQALMKPHERLMGLHLPDGGHLSHGYQTE-TRKISAVSTYFESFPYRVDPETGIIDYDTLEKNAVLYRPKILVAGTSAYCRLIDYKRMREIADKVGAYLMVDMAHISGLVAAGVIPSPFEYADIVTT--------TTHKSLRGPRGAMIFFRRG 263          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_SALRD (Serine hydroxymethyltransferase OS=Salinibacter ruber (strain DSM 13855) GN=glyA PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.019e-46
Identity = 111/247 (44.94%), Postives = 152/247 (61.54%), Query Frame = 2
Query:   92 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            S+L   DPEIHD+I+KE +RQ  G+ELIASENF S AV+EA+G+ALTNKY+EG+PG RYYGG E +D  E L R RA + +  D   W VNVQP++G+ AN A Y  +L+P D  +GLDL  GGHLTH      G  ++ + IL E+  Y V   TG ID N++ ++A + + K+I  G SA PR+++Y  F+  A++ G  F       +   +AG     P+ +T   +    T K L  GPRGG
Sbjct:    2 SALRNQDPEIHDVIQKEVQRQNDGLELIASENFASRAVMEAMGTALTNKYAEGLPGKRYYGGCEVVDRAEELARERAKELYDCD---W-VNVQPHAGAQANSAVYLTLLDPGDTFLGLDLSHGGHLTH------GSPVNFSGILYEAEYYGVEEETGRIDMNRVRDRAKEVQPKMISIGASAYPRDFDYEAFREIADEVGA-FLWMDMAHTAGLIAGGVLNDPMPHT--HVVTTTTHKTL-RGPRGG 234          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CHLPB (Serine hydroxymethyltransferase OS=Chlorobium phaeobacteroides (strain BS1) GN=glyA PE=3 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 1.019e-46
Identity = 121/253 (47.83%), Postives = 145/253 (57.31%), Query Frame = 2
Query:   98 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGN--CQPLLNTGPQIPQP------PTPKKLGGGPRGG 832
            L+  D  I D I  E RRQ   +ELIASENF S AV+EA GS +TNKY+EG PG RYYGG EF+D  ENL R RA + F  D     VNVQP+SGS AN     AVL+P DRIMGLDL  GGHLTH      G K++ +  L E+  Y V+  TG ID NK+EE AL+ R KLIICG SA  + +++  F+  A+K        +G   MA +A P       LLN     P P       T  K   GPRGG
Sbjct:    6 LQRQDKGIFDAITAEVRRQTETLELIASENFASRAVMEACGSVMTNKYAEGYPGKRYYGGCEFVDIAENLARDRAKKLFGCD----YVNVQPHSGSSANMGVLFAVLKPGDRIMGLDLSHGGHLTH------GSKVNFSGQLFEAHSYGVDRETGCIDMNKVEEMALEVRPKLIICGASAYSQGFDFKAFRDVADK--------VGAFLMADIAHPAGLIAAGLLND----PMPHCHFVTTTTHKTLRGPRGG 236          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_PELPB (Serine hydroxymethyltransferase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=glyA PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 8.626e-46
Identity = 115/249 (46.18%), Postives = 143/249 (57.43%), Query Frame = 2
Query:   98 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQ----PPTPKKLGGGPRGG 832
            L+  D E+ + I KE  RQ   +ELIASENFTS AV++A GS +TNKY+EG PG RYYGG EF+D  ENL R RA + F  D     VNVQP+SGS AN A   +VL+P DRIMGLDL  GGHLTH      G  ++ +  + E+  Y V+  TG ID NK+EE AL  R KLIICG SA  + ++   F+  A+K        +G   MA +A P         G  +P       T  K   GPRGG
Sbjct:    6 LQKQDSELFEAIAKETGRQTETLELIASENFTSRAVMQACGSVMTNKYAEGYPGKRYYGGCEFVDIAENLARDRAKKLFGCD----YVNVQPHSGSSANMAVLFSVLKPGDRIMGLDLSHGGHLTH------GSSVNFSGQMYEAHSYGVDRETGCIDMNKVEELALQVRPKLIICGASAYSQGFDVKAFRVIADK--------VGAFLMADIAHPAGLIAAGLLGNPLPHCHFVTTTTHKTLRGPRGG 236          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CHLP8 (Serine hydroxymethyltransferase OS=Chlorobaculum parvum (strain NCIB 8327) GN=glyA PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.510e-45
Identity = 112/249 (44.98%), Postives = 143/249 (57.43%), Query Frame = 2
Query:   98 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQ----PPTPKKLGGGPRGG 832
            L+ +DPE+ + I  E RRQ   +ELIASENFTS AV+EA GS +TNKY+EG PG RYYGG EF+D  ENL R RA + F  +     VNVQP+SGS AN A   AVL+P D IMGLDL  GGHLTH      G K++ +    ++  Y V+  TG ID N +EE AL  + KLII G SA  + +++  F+  A+K        +G   MA +A P        +   +P       T  K   GPRGG
Sbjct:    6 LKRLDPEVFEAIANETRRQTETLELIASENFTSTAVMEACGSVMTNKYAEGYPGKRYYGGCEFVDVAENLARDRAKKLFGCE----YVNVQPHSGSSANMAVLFAVLKPGDSIMGLDLSHGGHLTH------GSKVNFSGQFFDAHSYGVDKETGIIDMNAVEEMALKVKPKLIITGASAYSQGFDFKAFREIADK--------VGAFLMADIAHPAGLVAAGLSANPVPHCHFVTTTTHKTLRGPRGG 236          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CHLTE (Serine hydroxymethyltransferase OS=Chlorobium tepidum GN=glyA PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 3.278e-45
Identity = 112/252 (44.44%), Postives = 144/252 (57.14%), Query Frame = 2
Query:   89 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQ----PPTPKKLGGGPRGG 832
            N  L+ +DPE+ + I  E +RQ   +ELIASENFTS AV+EA GS +TNKY+EG PG RYYGG EF+D  ENL R RA + F  +     VNVQP+SGS AN A   AVL+P D IMGLDL  GGHLTH      G K++ +    ++  Y V+  TG ID NK+EE A   + KLII G SA  + +++  F+  A+K        +G   MA +A P        +   +P       T  K   GPRGG
Sbjct:    3 NDILKRLDPEVFEAIANETKRQTETLELIASENFTSKAVMEACGSVMTNKYAEGYPGKRYYGGCEFVDVAENLARDRAKKLFGCE----YVNVQPHSGSSANMAVLFAVLKPGDAIMGLDLSHGGHLTH------GSKVNFSGQFFDAHSYGVDKETGIIDMNKVEEMARRVKPKLIITGASAYSQGFDFKAFREVADK--------VGALLMADIAHPAGLVAAGLSANPMPHCHFVTTTTHKTLRGPRGG 236          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_THEAB (Serine hydroxymethyltransferase OS=Thermosipho africanus (strain TCF52B) GN=glyA PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 7.302e-45
Identity = 110/254 (43.31%), Postives = 145/254 (57.09%), Query Frame = 2
Query:   83 WGNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGG----PFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            W N  ++  DPEI+D+I KE  RQ  G+ELIASENF S AVIEA+GS LTNKY+EG PG RYYGG E++D  E L R RA + F++       NVQP+SGS AN  AY AV EP D IMG+ L  GGHLTH      G  ++ +  +   +PY VN  T  IDY+++ + AL  + K+I+ GGSA  R  ++ KF+  A++ G       A   GL +      P     ++ +        T  K   GPRGG
Sbjct:    2 WEN--VKKTDPEIYDVILKEWERQEYGLELIASENFASLAVIEAMGSVLTNKYAEGYPGRRYYGGCEWVDVAEKLARDRAKELFNVK----YANVQPHSGSQANMGAYFAVSEPGDTIMGMSLSHGGHLTH------GASVNFSGRIYNVVPYGVNPETEVIDYDEVRDLALKHKPKIIVAGGSAYSRIIDFKKFREIADEVGAYLIVDMAHFAGLVAAGIYPNPAEYAHIVTS--------TTHKTLRGPRGG 235          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_PELLD (Serine hydroxymethyltransferase OS=Pelodictyon luteolum (strain DSM 273) GN=glyA PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 9.537e-45
Identity = 115/250 (46.00%), Postives = 148/250 (59.20%), Query Frame = 2
Query:   98 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGP-GNCQPLLNTGPQIPQ----PPTPKKLGGGPRGG 832
            L+  D E+ D I  E  RQ   +ELIASENFTS AV++A GS +TNKY+EG PG RYYGG EF+D  E+L R RA + F  +     VNVQP+SGS AN A   +VL+P DRIMGLDL  GGHLTH      G  ++ +  + ++  Y V+  TG ID NK+EE ALDF+ +LIICG SA  + +++  F+  A+K        +G   MA +A P G     L T P +P       T  K   GPRGG
Sbjct:    6 LKMQDREVFDAIAGETVRQMETLELIASENFTSRAVMQACGSVMTNKYAEGYPGKRYYGGCEFVDIAEDLARERARKLFGCE----YVNVQPHSGSSANMAVLFSVLKPGDRIMGLDLSHGGHLTH------GSSVNFSGQMFDARSYGVDRETGIIDMNKVEEMALDFKPRLIICGASAYSQGFDFKAFREIADK--------VGAFLMADIAHPAGLIAAGLLTDP-MPHCHFVTTTTHKTLRGPRGG 236          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_ACIBL (Serine hydroxymethyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=glyA PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.246e-44
Identity = 109/250 (43.60%), Postives = 146/250 (58.40%), Query Frame = 2
Query:   89 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAG--PGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            + SL   DP+I + I  E+RRQ  G+ELIASENF S AV++A GS  TNKY+EG PG RYYGG E+ D +ENL R RA + F  +      NVQP+SGS AN  AY A+L+P D I+GL+L  GGHLTHG+       ++ +    + +PY V   T  IDY++LE+ AL+   K+I+ GGSA PR +++ + +  A+K G  F     +  MA  AG   G   P       +    T K L  GPR G
Sbjct:    6 SQSLNEEDPQIAEAIANEERRQHEGLELIASENFVSEAVLQAAGSVFTNKYAEGYPGKRYYGGCEYADVVENLARDRAKELFGAE----HANVQPHSGSSANMEAYGAILQPGDTILGLNLAHGGHLTHGH------PLNFSGKTYKIVPYGVTKETETIDYDELEKLALEHHPKVIVGGGSAYPRIFDFKRMREIADKAGALF-----MVDMAHFAGLVAGGAHPSPVPHAHVVTTTTHKTL-RGPRAG 239          
The following BLAST results are available for this feature:
BLAST of EY675132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYC_CANAL2.958e-5445.59Serine hydroxymethyltransferase, cytosolic OS=Cand... [more]
GLYC_ASHGO2.958e-5445.95Serine hydroxymethyltransferase, cytosolic OS=Ashb... [more]
GLYA_SALRD1.019e-4644.94Serine hydroxymethyltransferase OS=Salinibacter ru... [more]
GLYA_CHLPB1.019e-4647.83Serine hydroxymethyltransferase OS=Chlorobium phae... [more]
GLYA_PELPB8.626e-4646.18Serine hydroxymethyltransferase OS=Pelodictyon pha... [more]
GLYA_CHLP82.510e-4544.98Serine hydroxymethyltransferase OS=Chlorobaculum p... [more]
GLYA_CHLTE3.278e-4544.44Serine hydroxymethyltransferase OS=Chlorobium tepi... [more]
GLYA_THEAB7.302e-4543.31Serine hydroxymethyltransferase OS=Thermosipho afr... [more]
GLYA_PELLD9.537e-4546.00Serine hydroxymethyltransferase OS=Pelodictyon lut... [more]
GLYA_ACIBL1.246e-4443.60Serine hydroxymethyltransferase OS=Acidobacteria b... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-006-E06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675132 ID=EY675132; Name=EY675132; organism=Citrus sinensis; type=EST; length=1026bp
CACGCGTCCGCATTTTCCCTTTTTTTCCTTTTCAGTGAATCCAGAAAACG
GAAAAAAAGAAAAAATGGATCCAGTGAACGAGTGGGGCAACTCATCTCTT
GAAACCGTGGACCCAGAAATTCACGACCTGATCGAGAAAGAGAAGCGCCG
ACAATGCCGCGGCATCGAGCTCATCGCCTCCGAGAACTTCACCTCCTTCG
CCGTTATCGAAGCCCTCGGCAGCGCCCTCACCAACAAATACTCAGAGGGA
ATGCCCGGCAACCGTTACTACGGAGGCAACGAATTCATCGACGAGATCGA
GAATCTCTGCCGGTCGAGAGCTTTACAAACTTTCCATTTGGACCCCACCC
AGTGGGGTGTCAACGTTCAGCCTTACTCCGGCTCGCCGGCCAACTTCGCC
GCTTACACGGCGGTGCTCGAGCCTCATGACCGTATCATGGGGCTGGACTT
GCCGTCCGGAGGGCATTTGACTCATGGGTATTACACTTCTGGCGGGAAAA
AGATATCGGCGACTTCGATTTTACTCGAGAGCTTGCCGTACAAGGTGAAT
TCGAGTACTGGGTATATTGATTACAATAAGTTGGAGGAGAAAGCGTTGGA
TTTTAGGGCGAAGTTGATCATTTGCGGGGGGAGTGCGTAACCAAGGGAAT
GGGAATATGCCAAATTCCAAACTGGTGCTGAAAAGTGGGGGGGCCCTTTT
GCTCGGGGGATAGGGCTCAAATCAATGGCCTTTGTTGCTGGCCCAGGAAA
CTGCCAACCCCTTTTGAATACTGGTCCCCAAATCCCCCAACCCCCAACCC
CAAAAAAACTTGGGGGGGGCCCCAGGGGGGGGGATAGATTTCTTCCACCG
GGAAAGGGGCCCCTAAACACCCCCCAAAAAAAGGGGCCCAACCCAAAGGG
GGGGGGCGGGTTTTTATACTTTTTAAAAAAAAAAAAAAAATAAATTTTTT
TTTGGTTGTTTCCTCCCCCCCCCCCCCCCCTCTTCAGGAGGGGGGGGGTG
CCTCCTCCCCCACACACACCCCCCAC
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