EY675132

Overview
NameEY675132
Unique NameEY675132
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_GEOSL (Serine hydroxymethyltransferase OS=Geobacter sulfurreducens GN=glyA PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.166e-42
Identity = 106/249 (42.57%), Postives = 142/249 (57.03%), Query Frame = 2
Query:   92 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAG--PGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            S LET DP++ + I  E  RQ   +ELIASENF S AV+EA GS +TNKY+EG PG RYYGG   +D +ENL   RA + F  D      NVQP+SGS AN A Y +VL+P D I+G++L  GGHLTH      G  ++ +      +PY V+  T  ID+N++E  AL+ + K+I+ G SA PR  ++A F+  A+K G      + +  MA +AG       P      +     T K L  GPRGG
Sbjct:    2 SILETFDPQVAEAIRHETERQEYNLELIASENFVSEAVLEAQGSVMTNKYAEGYPGKRYYGGCHHVDVVENLAIERAKELFGAD----HANVQPHSGSQANMAVYFSVLKPGDTILGMNLSHGGHLTH------GSPVNFSGRFFNVVPYGVSQETETIDFNEVERLALEHKPKMIVVGASAYPRTIDFAAFRIIADKVG-----AVIMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTL-RGPRGG 234          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CLOK5 (Serine hydroxymethyltransferase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=glyA PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.523e-42
Identity = 106/254 (41.73%), Postives = 149/254 (58.66%), Query Frame = 2
Query:   92 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTG-PQIPQP------PTPKKLGGGPRGG 832
            + L+  D +I+ +IE+E  RQ  GIELIASENFTS +V+EA+GS LTNKY+EG PG RYYGG   +D+ E+L R R  + F+ +     VNVQP+SGS AN A Y +VL+P D ++G+ L  GGHLTH      G K+S +  L   + Y +NS T  IDY+++ E AL  + K+I+ G SA PR+ ++ K +   ++ G        +  MA +AG      ++  G  + P P       T  K   GPRGG
Sbjct:    4 NELKNTDKDIYGIIEEEWERQKNGIELIASENFTSKSVMEAMGSFLTNKYAEGYPGKRYYGGCYIVDKAEDLARDRMKKLFNAE----HVNVQPHSGSQANMAVYMSVLKPGDTVLGMSLNHGGHLTH------GSKVSFSGKLYNFVSYGLNSDTEIIDYDEMRELALKHKPKMIVSGASAYPRKIDFKKIREICDEVGAYM-----MVDMAHIAG------IIAAGRHESPVPYADFVTTTTHKTLRGPRGG 236          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CLOK1 (Serine hydroxymethyltransferase OS=Clostridium kluyveri (strain NBRC 12016) GN=glyA PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.523e-42
Identity = 106/254 (41.73%), Postives = 149/254 (58.66%), Query Frame = 2
Query:   92 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTG-PQIPQP------PTPKKLGGGPRGG 832
            + L+  D +I+ +IE+E  RQ  GIELIASENFTS +V+EA+GS LTNKY+EG PG RYYGG   +D+ E+L R R  + F+ +     VNVQP+SGS AN A Y +VL+P D ++G+ L  GGHLTH      G K+S +  L   + Y +NS T  IDY+++ E AL  + K+I+ G SA PR+ ++ K +   ++ G        +  MA +AG      ++  G  + P P       T  K   GPRGG
Sbjct:    4 NELKNTDKDIYGIIEEEWERQKNGIELIASENFTSKSVMEAMGSFLTNKYAEGYPGKRYYGGCYIVDKAEDLARDRMKKLFNAE----HVNVQPHSGSQANMAVYMSVLKPGDTVLGMSLNHGGHLTH------GSKVSFSGKLYNFVSYGLNSDTEIIDYDEMRELALKHKPKMIVSGASAYPRKIDFKKIREICDEVGAYM-----MVDMAHIAG------IIAAGRHESPVPYADFVTTTTHKTLRGPRGG 236          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_WOLSU (Serine hydroxymethyltransferase OS=Wolinella succinogenes GN=glyA PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.989e-42
Identity = 111/256 (43.36%), Postives = 147/256 (57.42%), Query Frame = 2
Query:   89 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            N +LET D EI DLI +E  RQ   +E+IASENFT  AV+EA+GS LTNKY+EG P  RYYGG EF+D +E +   RA + F         NVQP++GS AN A Y A+L+P+D+I+G+DL  GGHLTH      G K+S T    +S  Y V    GYI+Y+K+EE A   + ++I+CG SA  RE ++ +F+  A+  G      + L  +A VAG       L    + P P         T  K   GPRGG
Sbjct:    2 NYALETNDKEIFDLIHEELDRQNTHLEMIASENFTFPAVMEAMGSVLTNKYAEGYPYKRYYGGCEFVDRVEEIAIERAKKLFGCG----FANVQPHAGSQANVAVYNALLKPYDKILGMDLSHGGHLTH------GAKVSVTGQTYQSFFYGVELD-GYINYDKVEEIAKIVKPQMIVCGFSAYARELDFKRFREIADSVG-----ALLLGDVAHVAG-------LIVAGEYPNPFPHCHIVTTTTHKTLRGPRGG 234          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_NOSP7 (Serine hydroxymethyltransferase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=glyA PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.989e-42
Identity = 110/253 (43.48%), Postives = 148/253 (58.50%), Query Frame = 2
Query:   98 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            L + DP I +LI  E +RQ   +ELIASENFTS AV+ A GS LTNKY+EG+PG RYYGG E+ID+IE L  +RA Q F         NVQP+SG+ ANFA + ++L+P D+IMG+DL  GGHLTH      G  ++ +    +   Y V+  T  +DY+++ E AL  R KL+ICG SA PR  ++ KF++ A++ G        L  +A +AG      L+ +G   P P         T  K   GPRGG
Sbjct:    9 LSSTDPAIAELINDELQRQRDHLELIASENFTSAAVLAAQGSVLTNKYAEGLPGKRYYGGCEYIDKIEQLAINRAKQIFGAA----HANVQPHSGAQANFAVFLSLLQPGDKIMGMDLSHGGHLTH------GSPVNVSGKWFQVSHYGVSQQTEQLDYDQIRELALRERPKLLICGYSAYPRIIDFEKFRSIADEVGAYL-----LADIAHIAG------LVASGLH-PDPIPHCHVVTTTTHKTLRGPRGG 239          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_LISW6 (Serine hydroxymethyltransferase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=glyA PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.989e-42
Identity = 109/252 (43.25%), Postives = 145/252 (57.54%), Query Frame = 2
Query:   98 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTG-PQIPQP------PTPKKLGGGPRGG 832
            L+  D E+ D I+ E  RQ   IELIASENF S  V+EA+GS LTNKY+EG PG RYYGG EF+D +E+L R RA + F  +      NVQP+SG+ AN A Y AVLEP D ++G++L  GGHLTH      G  ++ + +L   + Y V   T  IDY+ + E AL  + K+I+ G SA PR+ ++AKF+  A++ G        +  MA +AG      L+  G  Q P P       T  K   GPRGG
Sbjct:    4 LQKQDKEVFDAIKLELGRQRANIELIASENFVSEQVMEAMGSVLTNKYAEGYPGKRYYGGCEFVDIVEDLARDRAKKLFGAE----YANVQPHSGAQANMAVYHAVLEPGDTVLGMNLSHGGHLTH------GSPVNFSGVLYNFVEYGVREDTKEIDYDIVREAALKHKPKMIVAGASAYPRKIDFAKFREIADEVGAYL-----MVDMAHIAG------LVAAGLHQNPVPYADFTTTTTHKTLRGPRGG 234          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_GEOBB (Serine hydroxymethyltransferase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=glyA PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.989e-42
Identity = 107/249 (42.97%), Postives = 142/249 (57.03%), Query Frame = 2
Query:   92 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAG--PGNCQPLLNTGPQIPQPPTPKKLGGGPRGG 832
            S LET DP + ++I +E  RQ   +ELIASENF S AV+EA GS LTNKY+EG PG RYYGG   +D +ENL   RA + F  D     VNVQP+SGS AN A Y +VL+P D ++G++L  GGHLTH      G  ++ +  L   +PY V+  T  IDY + E  AL+ + K+I+ G SA PR  ++  F+  A+K G      + +  MA +AG       P      +     T K L  GPRGG
Sbjct:    2 SVLETFDPAVAEVIRQETERQEYNLELIASENFVSPAVLEAQGSVLTNKYAEGYPGKRYYGGCHCVDVVENLAIDRAKELFGAD----HVNVQPHSGSQANMAVYFSVLKPGDTVLGMNLAHGGHLTH------GSPVNFSGKLFNIVPYGVSKETQTIDYEETERLALEHKPKMIVVGASAYPRIIDFEAFRRIADKVG-----AVVMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTL-RGPRGG 234          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBL (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=glyA PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.989e-42
Identity = 108/255 (42.35%), Postives = 149/255 (58.43%), Query Frame = 2
Query:   92 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            ++L+  DPE+ D+I+KE+ RQ   IELIASENFTS +V+EA+GS LTNKY+EG P  RYYGG EF+DE+E+L R R  + F  +      NVQP+SGS AN A Y +VL+  D I+G+DL  GGHLTH      G  ++ +  L   + Y V+  T  IDY++L++ AL+ R K+I+ G SA PR  ++ K +   ++          +  MA +AG      L+ TG   P P         T  K   GPRGG
Sbjct:    4 TNLKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMEAMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFAAE----HANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTH------GSPVNFSGKLYNFISYGVDKETETIDYDQLKKIALENRPKMIVSGASAYPRIIDFEKIREICDE-----IDAYMMVDMAHIAG------LVATGLH-PSPVPYADFVTTTTHKTLRGPRGG 236          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBH (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=glyA PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.989e-42
Identity = 108/255 (42.35%), Postives = 148/255 (58.04%), Query Frame = 2
Query:   92 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            ++L+  DPE+ D+I+KE+ RQ   IELIASENFTS +V+E++GS LTNKY+EG P  RYYGG EF+DE+E+L R R  + F  +      NVQP+SGS AN A Y +VL+  D I+G+DL  GGHLTH      G  ++ +  L   + Y V+  T  IDY KL++ AL+ R K+I+ G SA PR  ++ K +   ++          +  MA +AG      L+ TG   P P         T  K   GPRGG
Sbjct:    4 TNLKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMESMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFAAE----HANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTH------GSPVNFSGKLYNFISYGVDKETETIDYEKLKKIALENRPKMIVSGASAYPRIIDFQKIREICDE-----IDAYMMVDMAHIAG------LVATGLH-PSPVPYADFVTTTTHKTLRGPRGG 236          
BLAST of EY675132 vs. ExPASy Swiss-Prot
Match: GLYA_CLOB1 (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=glyA PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.989e-42
Identity = 108/255 (42.35%), Postives = 148/255 (58.04%), Query Frame = 2
Query:   92 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSILLESLPYKVNSSTGYIDYNKLEEKALDFRAKLIICGGSA*PREWEYAKFQTGAEKWGGPFARGIGLKSMAFVAGPGNCQPLLNTGPQIPQP--------PTPKKLGGGPRGG 832
            ++L+  DPE+ D+I+KE+ RQ   IELIASENFTS +V+E++GS LTNKY+EG P  RYYGG EF+DE+E+L R R  + F  +      NVQP+SGS AN A Y +VL+  D I+G+DL  GGHLTH      G  ++ +  L   + Y V+  T  IDY KL++ AL+ R K+I+ G SA PR  ++ K +   ++          +  MA +AG      L+ TG   P P         T  K   GPRGG
Sbjct:    4 TNLKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMESMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFAAE----HANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTH------GSPVNFSGKLYNFISYGVDKETETIDYEKLKKIALENRPKMIVSGASAYPRIIDFQKIREICDE-----IDAYMMVDMAHIAG------LVATGLH-PSPVPYADFVTTTTHKTLRGPRGG 236          
The following BLAST results are available for this feature:
BLAST of EY675132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYA_GEOSL1.166e-4242.57Serine hydroxymethyltransferase OS=Geobacter sulfu... [more]
GLYA_CLOK51.523e-4241.73Serine hydroxymethyltransferase OS=Clostridium klu... [more]
GLYA_CLOK11.523e-4241.73Serine hydroxymethyltransferase OS=Clostridium klu... [more]
GLYA_WOLSU1.989e-4243.36Serine hydroxymethyltransferase OS=Wolinella succi... [more]
GLYA_NOSP71.989e-4243.48Serine hydroxymethyltransferase OS=Nostoc punctifo... [more]
GLYA_LISW61.989e-4243.25Serine hydroxymethyltransferase OS=Listeria welshi... [more]
GLYA_GEOBB1.989e-4242.97Serine hydroxymethyltransferase OS=Geobacter bemid... [more]
GLYA_CLOBL1.989e-4242.35Serine hydroxymethyltransferase OS=Clostridium bot... [more]
GLYA_CLOBH1.989e-4242.35Serine hydroxymethyltransferase OS=Clostridium bot... [more]
GLYA_CLOB11.989e-4242.35Serine hydroxymethyltransferase OS=Clostridium bot... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-006-E06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675132 ID=EY675132; Name=EY675132; organism=Citrus sinensis; type=EST; length=1026bp
CACGCGTCCGCATTTTCCCTTTTTTTCCTTTTCAGTGAATCCAGAAAACG
GAAAAAAAGAAAAAATGGATCCAGTGAACGAGTGGGGCAACTCATCTCTT
GAAACCGTGGACCCAGAAATTCACGACCTGATCGAGAAAGAGAAGCGCCG
ACAATGCCGCGGCATCGAGCTCATCGCCTCCGAGAACTTCACCTCCTTCG
CCGTTATCGAAGCCCTCGGCAGCGCCCTCACCAACAAATACTCAGAGGGA
ATGCCCGGCAACCGTTACTACGGAGGCAACGAATTCATCGACGAGATCGA
GAATCTCTGCCGGTCGAGAGCTTTACAAACTTTCCATTTGGACCCCACCC
AGTGGGGTGTCAACGTTCAGCCTTACTCCGGCTCGCCGGCCAACTTCGCC
GCTTACACGGCGGTGCTCGAGCCTCATGACCGTATCATGGGGCTGGACTT
GCCGTCCGGAGGGCATTTGACTCATGGGTATTACACTTCTGGCGGGAAAA
AGATATCGGCGACTTCGATTTTACTCGAGAGCTTGCCGTACAAGGTGAAT
TCGAGTACTGGGTATATTGATTACAATAAGTTGGAGGAGAAAGCGTTGGA
TTTTAGGGCGAAGTTGATCATTTGCGGGGGGAGTGCGTAACCAAGGGAAT
GGGAATATGCCAAATTCCAAACTGGTGCTGAAAAGTGGGGGGGCCCTTTT
GCTCGGGGGATAGGGCTCAAATCAATGGCCTTTGTTGCTGGCCCAGGAAA
CTGCCAACCCCTTTTGAATACTGGTCCCCAAATCCCCCAACCCCCAACCC
CAAAAAAACTTGGGGGGGGCCCCAGGGGGGGGGATAGATTTCTTCCACCG
GGAAAGGGGCCCCTAAACACCCCCCAAAAAAAGGGGCCCAACCCAAAGGG
GGGGGGCGGGTTTTTATACTTTTTAAAAAAAAAAAAAAAATAAATTTTTT
TTTGGTTGTTTCCTCCCCCCCCCCCCCCCCTCTTCAGGAGGGGGGGGGTG
CCTCCTCCCCCACACACACCCCCCAC
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