EY675126

Overview
NameEY675126
Unique NameEY675126
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675126 vs. ExPASy Swiss-Prot
Match: RIR1_DROME (Ribonucleoside-diphosphate reductase large subunit OS=Drosophila melanogaster GN=RnrL PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 1.285e-29
Identity = 62/100 (62.00%), Postives = 74/100 (74.00%), Query Frame = 3
Query:   36 FDFEKLAHDKAIVTENLNKIIDVNYYPVETARPSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKNIFETIYYHALKTSSEIAAKEGPYETYHNDP 335
            +DF+KL     IVT+NLNKIID+NYYP+  AR SNLRHRP+GIG+QG AD  IL+   +ES EA  LN+ IFETIYY AL+ S E+A  EGPYETY   P
Sbjct:  472 YDFKKLKEVTKIVTKNLNKIIDINYYPLPEARKSNLRHRPVGIGIQGFADALILMRFPYESEEAGLLNQQIFETIYYGALEASCELAQTEGPYETYEGSP 571          
BLAST of EY675126 vs. ExPASy Swiss-Prot
Match: RIR1_CRYPV (Ribonucleoside-diphosphate reductase large chain OS=Cryptosporidium parvum GN=RNR1 PE=3 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 1.420e-28
Identity = 59/103 (57.28%), Postives = 75/103 (72.82%), Query Frame = 3
Query:   27 NRFFDFEKLAHDKAIVTENLNKIIDVNYYPVETARPSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKNIFETIYYHALKTSSEIAAKEGPYETYHNDP 335
            N+ FDF+KL     ++T NLNK+IDV YY ++  + SNLRHRP+GIG+QGLAD F++L M +ES  A++LNK IFE IYY AL  S E+A K GPYETY   P
Sbjct:  457 NKTFDFDKLKEVTKVITRNLNKLIDVGYYSLKECKKSNLRHRPLGIGIQGLADCFMMLRMPYESEGAKKLNKQIFEVIYYAALDASCELAEKYGPYETYSGSP 559          
BLAST of EY675126 vs. ExPASy Swiss-Prot
Match: RIR1_YEAST (Ribonucleoside-diphosphate reductase large chain 1 OS=Saccharomyces cerevisiae GN=RNR1 PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 4.133e-28
Identity = 58/100 (58.00%), Postives = 77/100 (77.00%), Query Frame = 3
Query:   36 FDFEKLAHDKAIVTENLNKIIDVNYYPVETARPSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKNIFETIYYHALKTSSEIAAKEGPYETYHNDP 335
            ++F+KL     +VT NLN++ID NYYPVE AR SN+RHRPI +GVQGLADTF+LL + F+S EA+ LN  IFETIY+ +++ S E+A K+GPYET+   P
Sbjct:  465 YNFKKLHEIAKVVTRNLNRVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDSEEARLLNIQIFETIYHASMEASCELAQKDGPYETFQGSP 564          
BLAST of EY675126 vs. ExPASy Swiss-Prot
Match: RIR1_PLAF4 (Ribonucleoside-diphosphate reductase large subunit OS=Plasmodium falciparum (isolate Dd2) GN=RNR1 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.203e-27
Identity = 60/100 (60.00%), Postives = 76/100 (76.00%), Query Frame = 3
Query:   36 FDFEKLAHDKAIVTENLNKIIDVNYYPVETARPSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKNIFETIYYHALKTSSEIAAKEGPYETYHNDP 335
            F+F+KL     I+T NL+KII+ NYYPV+ A+ SN RHRPIGIGVQGLADTF+LL   +ES  A++LNK IFET+YY AL+ S E+A+  GPYE+Y   P
Sbjct:  460 FNFKKLYEITKIITRNLDKIIERNYYPVKEAKTSNTRHRPIGIGVQGLADTFMLLRYPYESDAAKELNKRIFETMYYAALEMSVELASIHGPYESYQGSP 559          
BLAST of EY675126 vs. ExPASy Swiss-Prot
Match: RIR1_TRYBB (Ribonucleoside-diphosphate reductase large subunit OS=Trypanosoma brucei brucei GN=RNR1 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.679e-27
Identity = 58/100 (58.00%), Postives = 74/100 (74.00%), Query Frame = 3
Query:   36 FDFEKLAHDKAIVTENLNKIIDVNYYPVETARPSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKNIFETIYYHALKTSSEIAAKEGPYETYHNDP 335
            FD+  L     +VT NLN++ID N+YPV  AR SNLRHRP+GIGVQGLAD F LL + F  PEA++LN+ IFETIY  A++ S+E+A K+GPYET+   P
Sbjct:  470 FDYVALKEVTKVVTRNLNRVIDRNHYPVCEARYSNLRHRPVGIGVQGLADAFALLSLPFAHPEAKKLNRQIFETIYIAAVEASTELAEKDGPYETFKGSP 569          
BLAST of EY675126 vs. ExPASy Swiss-Prot
Match: RIR1_ENCCU (Ribonucleoside-diphosphate reductase large chain OS=Encephalitozoon cuniculi GN=ECU10_0920 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.679e-27
Identity = 58/101 (57.43%), Postives = 75/101 (74.26%), Query Frame = 3
Query:   33 FFDFEKLAHDKAIVTENLNKIIDVNYYPVETARPSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKNIFETIYYHALKTSSEIAAKEGPYETYHNDP 335
            +FDFE       I+T NLN++ID NYYPVE AR SN+R+RPIGIGVQGLAD F +L +AFES  A+ LN++IFE +YY A++ S E+A KEGP+ +Y   P
Sbjct:  452 WFDFEAFRRVVKILTVNLNRVIDFNYYPVEEARRSNMRNRPIGIGVQGLADLFAILRLAFESDGARSLNQDIFEAMYYSAMEASCELAEKEGPFPSYEGSP 552          
BLAST of EY675126 vs. ExPASy Swiss-Prot
Match: RIR3_YEAST (Ribonucleoside-diphosphate reductase large chain 2 OS=Saccharomyces cerevisiae GN=RNR3 PE=1 SV=4)

HSP 1 Score: 122.479 bits (306), Expect = 3.499e-27
Identity = 56/100 (56.00%), Postives = 74/100 (74.00%), Query Frame = 3
Query:   36 FDFEKLAHDKAIVTENLNKIIDVNYYPVETARPSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKNIFETIYYHALKTSSEIAAKEGPYETYHNDP 335
            ++FE+L     ++T NLN++ID NYYPV  AR SN++HRPI +GVQGLADT+++L + FES EAQ LNK IFETIY+  L+ S E+A KEG Y T+   P
Sbjct:  465 YNFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLRLPFESEEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSP 564          
BLAST of EY675126 vs. ExPASy Swiss-Prot
Match: RIR1_SCHPO (Ribonucleoside-diphosphate reductase large chain OS=Schizosaccharomyces pombe GN=cdc22 PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 4.570e-27
Identity = 60/100 (60.00%), Postives = 73/100 (73.00%), Query Frame = 3
Query:   36 FDFEKLAHDKAIVTENLNKIIDVNYYPVETARPSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKNIFETIYYHALKTSSEIAAKEGPYETYHNDP 335
            ++F+KL     +VT NLNKIIDVNYYPV  AR SN+RHRP+G+GVQGLAD F  L + FES  A++LN  IFETIY+ AL+ S EIA  EG YE+Y   P
Sbjct:  460 YNFQKLHDVVKVVTRNLNKIIDVNYYPVPEARRSNMRHRPVGLGVQGLADAFFALRLPFESAGAKKLNIQIFETIYHAALEASCEIAQVEGTYESYEGSP 559          
BLAST of EY675126 vs. ExPASy Swiss-Prot
Match: RIR1_NEUCR (Ribonucleoside-diphosphate reductase large chain OS=Neurospora crassa GN=rnr-1 PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 7.794e-27
Identity = 57/103 (55.34%), Postives = 73/103 (70.87%), Query Frame = 3
Query:   27 NRFFDFEKLAHDKAIVTENLNKIIDVNYYPVETARPSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKNIFETIYYHALKTSSEIAAKEGPYETYHNDP 335
            N  +DF+KL     +V  NLNKIID+N+YPV+ A  SN+RHRPIG+GVQGLAD F+ L M F+S  A +LN  IFETIY+ AL  S ++A ++GPY TY   P
Sbjct:  459 NASYDFKKLHEVTQVVVRNLNKIIDINHYPVKEAHNSNMRHRPIGVGVQGLADAFLALRMPFDSDAASKLNIQIFETIYHAALTASCQLAKEQGPYATYEGSP 561          
BLAST of EY675126 vs. ExPASy Swiss-Prot
Match: RIR1_PLAFG (Ribonucleoside-diphosphate reductase large subunit OS=Plasmodium falciparum (isolate FCR-3 / Gambia) GN=RNR1 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.528e-25
Identity = 57/100 (57.00%), Postives = 74/100 (74.00%), Query Frame = 3
Query:   36 FDFEKLAHDKAIVTENLNKIIDVNYYPVETARPSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKNIFETIYYHALKTSSEIAAKEGPYETYHNDP 335
            F+F+KL     I+T NL+KII+ NYYPV+ A+ SN RHRPIGIGVQGLADTF+LL   +ES  A++LNK I+ET+YY AL+ S +   + GPYE+Y   P
Sbjct:  460 FNFKKLYEITKIITRNLDKIIERNYYPVKEAKTSNTRHRPIGIGVQGLADTFMLLRYLYESDAAKELNKRIYETMYYAALEMSVD-WLQSGPYESYQGSP 558          
The following BLAST results are available for this feature:
BLAST of EY675126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
RIR1_DROME1.285e-2962.00Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_CRYPV1.420e-2857.28Ribonucleoside-diphosphate reductase large chain O... [more]
RIR1_YEAST4.133e-2858.00Ribonucleoside-diphosphate reductase large chain 1... [more]
RIR1_PLAF41.203e-2760.00Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_TRYBB2.679e-2758.00Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_ENCCU2.679e-2757.43Ribonucleoside-diphosphate reductase large chain O... [more]
RIR3_YEAST3.499e-2756.00Ribonucleoside-diphosphate reductase large chain 2... [more]
RIR1_SCHPO4.570e-2760.00Ribonucleoside-diphosphate reductase large chain O... [more]
RIR1_NEUCR7.794e-2755.34Ribonucleoside-diphosphate reductase large chain O... [more]
RIR1_PLAFG9.528e-2557.00Ribonucleoside-diphosphate reductase large subunit... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-006-D12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675126 ID=EY675126; Name=EY675126; organism=Citrus sinensis; type=EST; length=932bp
AGGATTGTTGGGAGCCCACGTTCTAAAATAGATTTTTTGACTTTGAAAAA
TTAGCTCACGATAAAGCAATTGTTACTGAAAACCTTAACAAAATAATTGA
TGTTAATTACTACCCTGTTGAAACTGCCAGACCGTCAAATTTGCGACATA
GACCCATCGGTATTGGAGTTCAGGGTCTAGCAGATACCTTCATCTTACTT
GGAATGGCATTTGAATCACCAGAGGCTCAACAGCTGAACAAAAACATATT
TGAAACCATTTACTACCATGCTCTGAAAACTTCTTCGGAGATAGCTGCAA
AAGAAGGTCCTTATGAAACATATCATAATGACCCATGTGAGACAAGAGAA
TTCTCCCACCCGAACATGTGCAAATGAAATTCAATGAGAATCAAAAGGGA
ATGGCGCAAACAAATAGGGGGGGGGAGGGGACGAAAAGTGAACATGAAAA
AAATAAACGTAGAGAATGAAAAACAAATGGAAAAAAAGGCGGGCGAAAAA
AAACGAGAAGAAGAGAAAGACCACGCAAGAGGACCAGTCAGACCAAACAA
GCAAAAAAAGAAAAAAAAAAACAAAGAGAAAAAAGAAAAAAAGCAAAAAC
AAAAAAAAGAGAAGAGACAAAGAAAGAAAAAAACAAAAAAGACACAAACA
ACAGAACGAGAGAGAGACCGGAAAACAAACAGAACACAACAACAGCAAAA
ACAAAGAAGGAAGACCAAGACAGAGAGACAGAAACAAACAAAAAGCGATG
AGCGGGGAGAGCAAACAAAAAAAAGAGCAAAGCAGAAGGGAAGAAGGGGA
AAAAAAGAAAGAAAGAAAGAACAAACGAAAAAAGAACAGACAGCACGACG
AAAAAGAACAAAAAGGGAAAAACGAAAAAGAAAACGAAAAGAACAAACAG
GGACAGAAAAACCAAAAAAAAGAAAACGAACA
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