EY675126

Overview
NameEY675126
Unique NameEY675126
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675126 vs. ExPASy Swiss-Prot
Match: RIR1_MIMIV (Ribonucleoside-diphosphate reductase large subunit OS=Acanthamoeba polyphaga mimivirus GN=RNR1 PE=3 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.376e-23
Identity = 53/106 (50.00%), Postives = 72/106 (67.92%), Query Frame = 3
Query:   36 FDFEKLAHDKAIVTENLNKIIDVNYYPVETARPSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKNIFETIYYHALKTSSEIAAKEGPYETYHNDPCETREF 353
            F+++KL     I+T NLN IID+N+YP++  R +NLR RPIGIGVQGLAD F +    F+S  A+ LN+ IFETIYY AL  S+++A + G Y+TY   P    +F
Sbjct:  530 FNYQKLFKISRILTRNLNNIIDINFYPLDKTRITNLRDRPIGIGVQGLADVFAMFKTPFDSEIARDLNRKIFETIYYGALTESNKLAREFGTYQTYQGSPISQGKF 635          
BLAST of EY675126 vs. ExPASy Swiss-Prot
Match: RIR1_DICDI (Ribonucleoside-diphosphate reductase large subunit OS=Dictyostelium discoideum GN=rnrA PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.828e-23
Identity = 54/100 (54.00%), Postives = 68/100 (68.00%), Query Frame = 3
Query:   36 FDFEKLAHDKAIVTENLNKIIDVNYYPVETARPSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKNIFETIYYHALKTSSEIAAKEGPYETYHNDP 335
            FD + L     ++T NLN IID NYYPV  A+ SNLRHRPIGIG+QGLAD FI + M F+S  A +LN  I ETIY+ AL  S E+A ++G YE++   P
Sbjct:  488 FDHQFLFEITKLITVNLNVIIDRNYYPVAEAKTSNLRHRPIGIGIQGLADVFIKMRMPFDSVAAAKLNVEIAETIYFAALTASHELAIRDGTYESFKGSP 587          
BLAST of EY675126 vs. ExPASy Swiss-Prot
Match: RIR1_ASFB7 (Ribonucleoside-diphosphate reductase large subunit OS=African swine fever virus (strain Badajoz 1971 Vero-adapted) GN=Ba71V-045 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.969e-18
Identity = 46/96 (47.92%), Postives = 62/96 (64.58%), Query Frame = 3
Query:   36 FDFEKLAHDKAIVTENLNKIIDVNYYPVETARPSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKNIFETIYYHALKTSSEIAAKEGPYETY 323
            +D+  L      VTENL+ IID  YYP E  R SN+RHRPIGIGV GLAD F  L M F SPEA  +++ I   +YY A++ S E+A ++G + ++
Sbjct:  455 YDYRGLIEASGNVTENLDNIIDNGYYPTEATRRSNMRHRPIGIGVFGLADVFASLKMKFGSPEAIAMDEAIHAALYYGAMRRSIELAKEKGSHPSF 550          
BLAST of EY675126 vs. ExPASy Swiss-Prot
Match: RIR1_ASFM2 (Ribonucleoside-diphosphate reductase large subunit OS=African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) GN=Mal-053 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.877e-18
Identity = 46/96 (47.92%), Postives = 62/96 (64.58%), Query Frame = 3
Query:   36 FDFEKLAHDKAIVTENLNKIIDVNYYPVETARPSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKNIFETIYYHALKTSSEIAAKEGPYETY 323
            +D+  L      VTENL+ IID  YYP E  R SN+RHRPIGIGV GLAD F  L M F SPEA  +++ I   +YY A++ S E+A ++G + ++
Sbjct:  456 YDYRGLIEAAGNVTENLDNIIDNGYYPTEATRRSNMRHRPIGIGVFGLADVFASLKMKFGSPEAIAIDEAIHAALYYGAMRRSIELAKEKGSHPSF 551          
BLAST of EY675126 vs. ExPASy Swiss-Prot
Match: RIR1_ASFWA (Ribonucleoside-diphosphate reductase large subunit OS=African swine fever virus (isolate Warthog/Namibia/Wart80/1980) GN=War-055 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.638e-18
Identity = 45/96 (46.88%), Postives = 62/96 (64.58%), Query Frame = 3
Query:   36 FDFEKLAHDKAIVTENLNKIIDVNYYPVETARPSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKNIFETIYYHALKTSSEIAAKEGPYETY 323
            +D+  L      VTENL+ IID  YYP E  R SN+RHRPIGIGV GLAD F  L + F SPEA  +++ I   +YY A++ S E+A ++G + ++
Sbjct:  455 YDYRGLIEASGNVTENLDNIIDNGYYPTEATRRSNMRHRPIGIGVFGLADVFASLKIKFGSPEAIAMDEAIHAALYYGAMRRSIELAKEKGSHPSF 550          
BLAST of EY675126 vs. ExPASy Swiss-Prot
Match: RIR1_ASFP4 (Ribonucleoside-diphosphate reductase large subunit OS=African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) GN=Pret-057 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.638e-18
Identity = 45/96 (46.88%), Postives = 62/96 (64.58%), Query Frame = 3
Query:   36 FDFEKLAHDKAIVTENLNKIIDVNYYPVETARPSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKNIFETIYYHALKTSSEIAAKEGPYETY 323
            +D+  L      VTENL+ IID  YYP E  R SN+RHRPIGIGV GLAD F  L + F SPEA  +++ I   +YY A++ S E+A ++G + ++
Sbjct:  455 YDYRGLIEASGNVTENLDNIIDNGYYPTEATRRSNMRHRPIGIGVFGLADVFASLKIKFGSPEAIAMDEAIHAALYYGAMRRSIELAKEKGSHPSF 550          
BLAST of EY675126 vs. ExPASy Swiss-Prot
Match: RIR1_ASFK5 (Ribonucleoside-diphosphate reductase large subunit OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) GN=Ken-057 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.128e-17
Identity = 45/96 (46.88%), Postives = 61/96 (63.54%), Query Frame = 3
Query:   36 FDFEKLAHDKAIVTENLNKIIDVNYYPVETARPSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKNIFETIYYHALKTSSEIAAKEGPYETY 323
            +D+  L      VTENL+ IID  YYP E  R SN+RHRPIGIGV GLAD F    M F SPEA  +++ I   +YY A++ S E+A ++G + ++
Sbjct:  456 YDYRGLIEAAGNVTENLDNIIDNGYYPTEATRRSNMRHRPIGIGVFGLADVFASFKMKFGSPEAIAMDEAIHAALYYGAMRRSVELAKEKGSHPSF 551          
BLAST of EY675126 vs. ExPASy Swiss-Prot
Match: RIR1_CHLPN (Ribonucleoside-diphosphate reductase subunit alpha OS=Chlamydia pneumoniae GN=nrdA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.423e-12
Identity = 36/99 (36.36%), Postives = 55/99 (55.56%), Query Frame = 3
Query:   27 NRFFDFEKLAHDKAIVTENLNKIIDVNYYPVETARPSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKNIFETIYYHALKTSSEIAAKEGPYETY 323
            N   D EKL    +I    L+ +ID+N+YP   A+ +NL HR +G+GV G  D    L +++ S EA + +    E I Y+A+  SS +A + G Y +Y
Sbjct:  698 NDKLDEEKLKETISIAIRILDNVIDLNFYPTPEAKQANLTHRAVGLGVMGFQDVLYELNISYASQEAVEFSDECSEIIAYYAILASSLLAKERGTYASY 796          
BLAST of EY675126 vs. ExPASy Swiss-Prot
Match: RIR1_CHLTR (Ribonucleoside-diphosphate reductase subunit alpha OS=Chlamydia trachomatis GN=nrdA PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.208e-11
Identity = 34/95 (35.79%), Postives = 54/95 (56.84%), Query Frame = 3
Query:   39 DFEKLAHDKAIVTENLNKIIDVNYYPVETARPSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKNIFETIYYHALKTSSEIAAKEGPYETY 323
            D EKL+   +I    L+ +ID+N+YP + A+ +N  HR IG+GV G  D    L +++ S EA +      E I Y+A++ S  +A + G Y +Y
Sbjct:  704 DEEKLSETISIAVRMLDNVIDINFYPTKEAKEANFAHRAIGLGVMGFQDALYKLDISYASQEAVEFADYSSELISYYAIQASCLLAKERGTYSSY 798          
BLAST of EY675126 vs. ExPASy Swiss-Prot
Match: RIR1_CHLMU (Ribonucleoside-diphosphate reductase subunit alpha OS=Chlamydia muridarum GN=nrdA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.208e-11
Identity = 34/95 (35.79%), Postives = 54/95 (56.84%), Query Frame = 3
Query:   39 DFEKLAHDKAIVTENLNKIIDVNYYPVETARPSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKNIFETIYYHALKTSSEIAAKEGPYETY 323
            D EKL+   +I    L+ +ID+N+YP + A+ +N  HR IG+GV G  D    L +++ S EA +      E I Y+A++ S  +A + G Y +Y
Sbjct:  704 DEEKLSETISIAVRMLDNVIDINFYPTKEAKEANFAHRAIGLGVMGFQDALYKLDISYASQEAVEFADYSSELISYYAIQASCLLAKERGTYSSY 798          
The following BLAST results are available for this feature:
BLAST of EY675126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
RIR1_MIMIV1.376e-2350.00Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_DICDI6.828e-2354.00Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_ASFB72.969e-1847.92Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_ASFM23.877e-1847.92Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_ASFWA8.638e-1846.88Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_ASFP48.638e-1846.88Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_ASFK51.128e-1746.88Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_CHLPN5.423e-1236.36Ribonucleoside-diphosphate reductase subunit alpha... [more]
RIR1_CHLTR1.208e-1135.79Ribonucleoside-diphosphate reductase subunit alpha... [more]
RIR1_CHLMU1.208e-1135.79Ribonucleoside-diphosphate reductase subunit alpha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-006-D12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675126 ID=EY675126; Name=EY675126; organism=Citrus sinensis; type=EST; length=932bp
AGGATTGTTGGGAGCCCACGTTCTAAAATAGATTTTTTGACTTTGAAAAA
TTAGCTCACGATAAAGCAATTGTTACTGAAAACCTTAACAAAATAATTGA
TGTTAATTACTACCCTGTTGAAACTGCCAGACCGTCAAATTTGCGACATA
GACCCATCGGTATTGGAGTTCAGGGTCTAGCAGATACCTTCATCTTACTT
GGAATGGCATTTGAATCACCAGAGGCTCAACAGCTGAACAAAAACATATT
TGAAACCATTTACTACCATGCTCTGAAAACTTCTTCGGAGATAGCTGCAA
AAGAAGGTCCTTATGAAACATATCATAATGACCCATGTGAGACAAGAGAA
TTCTCCCACCCGAACATGTGCAAATGAAATTCAATGAGAATCAAAAGGGA
ATGGCGCAAACAAATAGGGGGGGGGAGGGGACGAAAAGTGAACATGAAAA
AAATAAACGTAGAGAATGAAAAACAAATGGAAAAAAAGGCGGGCGAAAAA
AAACGAGAAGAAGAGAAAGACCACGCAAGAGGACCAGTCAGACCAAACAA
GCAAAAAAAGAAAAAAAAAAACAAAGAGAAAAAAGAAAAAAAGCAAAAAC
AAAAAAAAGAGAAGAGACAAAGAAAGAAAAAAACAAAAAAGACACAAACA
ACAGAACGAGAGAGAGACCGGAAAACAAACAGAACACAACAACAGCAAAA
ACAAAGAAGGAAGACCAAGACAGAGAGACAGAAACAAACAAAAAGCGATG
AGCGGGGAGAGCAAACAAAAAAAAGAGCAAAGCAGAAGGGAAGAAGGGGA
AAAAAAGAAAGAAAGAAAGAACAAACGAAAAAAGAACAGACAGCACGACG
AAAAAGAACAAAAAGGGAAAAACGAAAAAGAAAACGAAAAGAACAAACAG
GGACAGAAAAACCAAAAAAAAGAAAACGAACA
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