EY675113

Overview
NameEY675113
Unique NameEY675113
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length988
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.156e-28
Identity = 44/89 (49.44%), Postives = 61/89 (68.54%), Query Frame = 2
Query:  101 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ 367
            A KR++++ K LQ+DPP   S  P   ++  W A I GP D+P+ GG F +T+ F  DYP KPP V F +++FHPNI ++GSICLDIL+
Sbjct:    2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK 90          

HSP 2 Score: 44.669 bits (104), Expect = 3.156e-28
Identity = 22/58 (37.93%), Postives = 32/58 (55.17%), Query Frame = 3
Query:  366 KIXWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 539
            K  WSP   ++ +L SI SLL DPNP+ P   E A ++  +K +Y     E   ++WT
Sbjct:   90 KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKY-----ESTARTWT 142          
BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.350e-28
Identity = 43/89 (48.31%), Postives = 61/89 (68.54%), Query Frame = 2
Query:  101 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ 367
            A KR++++ K LQ+DPP   S  P   ++  W A I GP D+P+ GG F +T+ F  DYP KPP V F +++FHPN+ ++GSICLDIL+
Sbjct:    2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILK 90          

HSP 2 Score: 44.2838 bits (103), Expect = 5.350e-28
Identity = 22/58 (37.93%), Postives = 32/58 (55.17%), Query Frame = 3
Query:  366 KIXWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 539
            K  WSP   ++ +L SI SLL DPNP+ P   E A ++  ++ +Y     E   +SWT
Sbjct:   90 KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ESTARSWT 142          
BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.965e-28
Identity = 43/89 (48.31%), Postives = 61/89 (68.54%), Query Frame = 2
Query:  101 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ 367
            A KR++++ K LQ+DPP   S  P   ++  W A I GP ++P+ GG F +T+ F  DYP KPP V F +++FHPNI ++GSICLDIL+
Sbjct:    2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK 90          

HSP 2 Score: 45.8246 bits (107), Expect = 6.965e-28
Identity = 23/58 (39.66%), Postives = 32/58 (55.17%), Query Frame = 3
Query:  366 KIXWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 539
            K  WSP   ++ +L SI SLL DPNP+ P   E A ++  +K +Y     E   +SWT
Sbjct:   90 KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKY-----ESTARSWT 142          
BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.001e-27
Identity = 43/89 (48.31%), Postives = 61/89 (68.54%), Query Frame = 2
Query:  101 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ 367
            A KR++++ K LQ+DPP   S  P   ++  W A I GP D+P+ GG F +++ F  DYP KPP V F +++FHPNI ++GSICLDIL+
Sbjct:    2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK 90          

HSP 2 Score: 44.669 bits (104), Expect = 2.001e-27
Identity = 22/58 (37.93%), Postives = 32/58 (55.17%), Query Frame = 3
Query:  366 KIXWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 539
            K  WSP   ++ +L SI SLL DPNP+ P   E A ++  ++ +Y     E   +SWT
Sbjct:   90 KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSWT 142          
BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.605e-27
Identity = 40/90 (44.44%), Postives = 62/90 (68.89%), Query Frame = 2
Query:  101 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN 370
            A +R++++ K LQ+DPP   S  P   ++  W A I GP+++P+ GG F + + F  DYP KPP V F +++FHPNI ++G+ICLDIL++
Sbjct:    2 ATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKD 91          

HSP 2 Score: 46.2098 bits (108), Expect = 2.605e-27
Identity = 23/58 (39.66%), Postives = 33/58 (56.90%), Query Frame = 3
Query:  366 KIXWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 539
            K  WSP   ++ +L SI SLL DPNP+ P   E A ++  +K +Y     E + +SWT
Sbjct:   90 KDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKY-----EAMARSWT 142          
BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBC7_SCHPO (Ubiquitin-conjugating enzyme E2-18 kDa OS=Schizosaccharomyces pombe GN=ubc3 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 3.373e-27
Identity = 39/89 (43.82%), Postives = 61/89 (68.54%), Query Frame = 2
Query:  101 AKKRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL 364
            A +RLM+++K L ++ P GI+  P  +++   W+ +I GPD TP++GG +  TL+F  DYP  PPT++F    FHPN+Y DG++C+ IL
Sbjct:    6 ALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISIL 94          

HSP 2 Score: 49.2914 bits (116), Expect = 3.373e-27
Identity = 21/53 (39.62%), Postives = 34/53 (64.15%), Query Frame = 3
Query:  375 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQS 533
            WSP+  V  IL S+ S+L +PN  S AN +A +++ E++ EY R VR +  ++
Sbjct:  111 WSPVQSVEKILLSVMSMLAEPNDESGANIDACKMWREDREEYCRVVRRLARKT 163          
BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.392e-27
Identity = 43/89 (48.31%), Postives = 61/89 (68.54%), Query Frame = 2
Query:  101 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ 367
            A KR++++ K LQ+DPP   S  P   ++  W A I GP ++P+ GG F +T+ F  DYP KPP V F +++FHPNI ++GSICLDIL+
Sbjct:    2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK 90          

HSP 2 Score: 43.5134 bits (101), Expect = 3.392e-27
Identity = 21/58 (36.21%), Postives = 32/58 (55.17%), Query Frame = 3
Query:  366 KIXWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 539
            K  WSP   ++ +L SI SLL DPNP+ P   E A ++  ++ +Y     E   ++WT
Sbjct:   90 KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----EATARNWT 142          
BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.392e-27
Identity = 42/89 (47.19%), Postives = 61/89 (68.54%), Query Frame = 2
Query:  101 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ 367
            A KR+ ++ + LQ+DPP   S  P  +++  W A I GP D+P+ GG F +T+ F  DYP KPP V F ++++HPNI ++GSICLDIL+
Sbjct:    2 ASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILK 90          

HSP 2 Score: 45.4394 bits (106), Expect = 3.392e-27
Identity = 24/58 (41.38%), Postives = 32/58 (55.17%), Query Frame = 3
Query:  366 KIXWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 539
            K  WSP   V+ +L SI SLL DPNP+ P   E A ++  ++ +Y     E   QSWT
Sbjct:   90 KEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKY-----ESTAQSWT 142          
BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 9.742e-27
Identity = 41/89 (46.07%), Postives = 62/89 (69.66%), Query Frame = 2
Query:  101 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ 367
            A KR++++ K LQ+DPP+  S  P   ++  W A I GP ++P+ GG F +++ F  DYP KPP V F ++++HPNI ++GSICLDIL+
Sbjct:    2 ASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILK 90          

HSP 2 Score: 44.2838 bits (103), Expect = 9.742e-27
Identity = 22/58 (37.93%), Postives = 32/58 (55.17%), Query Frame = 3
Query:  366 KIXWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 539
            K  WSP   ++ +L SI SLL DPNP+ P   E A ++  ++ +Y     E   +SWT
Sbjct:   90 KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKY-----ESTARSWT 142          
BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.268e-26
Identity = 42/90 (46.67%), Postives = 61/90 (67.78%), Query Frame = 2
Query:  101 AKKRLMRDFKRLQQDPPAGISGAP-QDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ 367
            A KR+ R+ + +Q+ PPA  S  P  + +I  W A I GP D+P+ GG F +++ F+ DYP KPP V F ++++HPNI + GSICLDIL+
Sbjct:    2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILK 91          

HSP 2 Score: 45.8246 bits (107), Expect = 1.268e-26
Identity = 25/58 (43.10%), Postives = 30/58 (51.72%), Query Frame = 3
Query:  366 KIXWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 539
            K  WSP    + +L SI SLL DPNPN P   E A L+  +K +Y     E   Q WT
Sbjct:   91 KEQWSPAPTTSKVLLSICSLLTDPNPNDPLVPEIAHLYKVDKSKY-----ESTAQKWT 143          
The following BLAST results are available for this feature:
BLAST of EY675113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 228
Match NameE-valueIdentityDescription
UBC9_ARATH3.156e-2849.44SUMO-conjugating enzyme UBC9 OS=Arabidopsis thalia... [more]
UBC28_ARATH5.350e-2848.31Ubiquitin carrier protein E2 28 OS=Arabidopsis tha... [more]
UBC10_ARATH6.965e-2848.31Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis ... [more]
UBC4_SOLLC2.001e-2748.31Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum ... [more]
UBC29_ARATH2.605e-2744.44Ubiquitin carrier protein E2 29 OS=Arabidopsis tha... [more]
UBC7_SCHPO3.373e-2743.82Ubiquitin-conjugating enzyme E2-18 kDa OS=Schizosa... [more]
UBC8_ARATH3.392e-2748.31Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis t... [more]
UBC30_ARATH3.392e-2747.19Ubiquitin carrier protein E2 30 OS=Arabidopsis tha... [more]
UBC11_ARATH9.742e-2746.07Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis ... [more]
UBC12_ARATH1.268e-2646.67Probable ubiquitin-conjugating enzyme E2 12 OS=Ara... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-006-C04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675113 ID=EY675113; Name=EY675113; organism=Citrus sinensis; type=EST; length=988bp
TTCTTTCTCTAGAAGCTTCTCCTCTCATTCTCCCCCCTTACCCCCTCTGC
AAAAGCCGCTTCTCAGTTTTGCTCTCTAAAACGCCACTATGTCAACACCG
GCGAAGAAGCGGCTGATGCGGGACTTCAAGCGCCTCCAGCAAGATCCACC
CGCCGGAATCAGCGGGGCCCCTCAAGACAACAACATCATGTTATGGAACG
CCGTTATTTTTGGGCCTGATGATACTCCCTGGGACGGAGGTACGTTCAAG
TTGACTCTTCAGTTTACAGAGGATTATCCGAATAAACCTCCAACAGTTCG
GTTCGTTTCACGGATGTTTCATCCAAATATCTATGCGGATGGAAGTATCT
GCCTGGATATATTACAAAATCANGTGGAGTCCTATATATGATGTTGCAGC
TATACTGACCTCCATCCAGTCGCTGCTTTGTGATCCAAATCCAAACTCCC
CTGCAAATTCTGAAGCAGCTCGGCTGTTTAGTGAGAATAAACGAGAGTAC
AACCGAAGAGTGCGTGAAATAGTGGAGCAAAGCTGGACAGCCGACTAAAA
GTCCCATGAAAGCACCGGCCGGTTATGCTGGAGAAATAAAAGATGAAAAC
TGGGGCTGGTGGGGTTGGTTTGGTCAAAATAATGGAACCCGTATTCAATC
GGATTTCAGGTGCATTGTTAATTAAAAAAATCCCCTTCGAATCTTTCCTC
CCCAAAAACCCTGGGTGGAACCCTTGGTTATTTTTCCAACATTTCCCTCT
TCCTTTTCCAAAACTTTCCGGGTAAATGTAATTTTATTGGGGACATTTTG
GTAAGGGGGGTTTTTTGGGGGGCGGGAAAACCCTGTGGATGTTGTTCTTT
AAAAAAACCCCCCCAAAAAAGAAACCCCTTTTTTTTTTTGGGAAATTTTT
TTTATGGGGGGATATTTTTTTGGGGGGATTTGTGGTGGGCGGGGGGGCGC
CCAAAAAAAAATAAAAAAAAAAAAAGGAAACAAAAACA
back to top