EY675113 | Citrus Genome Database

Overview


Name	EY675113
Unique Name	EY675113
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	988

Libraries


Library Name	Type
Sweet orange leaf, infected with CiLV	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBC15_SCHPO (Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe GN=ubc15 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.641e-26
Identity = 36/92 (39.13%), Postives = 60/92 (65.22%), Query Frame = 2

Query:   92 STPAKKRLMRDFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL 364
            S+ +++ L +  K +Q++PP G S G   D +I  W  +I GP+DT ++GG F  TL F +DYP  PP ++F + ++HPN++ +G +C+ IL
Sbjct:    3 SSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISIL 94

HSP 2 Score: 54.299 bits (129), Expect = 1.641e-26
Identity = 24/53 (45.28%), Postives = 35/53 (66.04%), Query Frame = 3

Query:  375 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQS 533
            W P++    IL S+ S+L  PN  SPAN +AA+ F EN +E+ +RVR +V +S
Sbjct:  111 WLPVHSPETILISVISMLSSPNDESPANIDAAKEFRENPQEFKKRVRRLVRRS 163

[Close]

BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.798e-26
Identity = 43/90 (47.78%), Postives = 61/90 (67.78%), Query Frame = 2

Query:  101 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN 370
            A KR+ R+   L +DPP+  S  P  +++  W A I GP D+P+ GG F L++ F  DYP KPP V F +R++HPNI ++GSICLDIL++
Sbjct:    2 ALKRINRELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRD 91

HSP 2 Score: 43.1282 bits (100), Expect = 2.798e-26
Identity = 19/48 (39.58%), Postives = 27/48 (56.25%), Query Frame = 3

Query:  375 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 518
            WSP   ++ +L SI SLL DPNP+ P   E A ++  ++  Y    RE
Sbjct:   93 WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYELSARE 140

[Close]

BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UB2G2_PONAB (Ubiquitin-conjugating enzyme E2 G2 OS=Pongo abelii GN=UBE2G2 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.621e-26
Identity = 44/93 (47.31%), Postives = 57/93 (61.29%), Query Frame = 2

Query:   89 MSTPAKKRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL 364
            M+  A KRLM ++K+L  +PP GI   P  + N   W A+I GP+DT ++ G F   L F  DYP  PP +RF   MFHPNIY DG +C+ IL
Sbjct:    1 MAGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISIL 93

HSP 2 Score: 46.595 bits (109), Expect = 3.621e-26
Identity = 18/53 (33.96%), Postives = 37/53 (69.81%), Query Frame = 3

Query:  375 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQS 533
            WSP+  V  IL S+ S+L +PN  S AN +A++++ +++ ++ +  ++IV++S
Sbjct:  110 WSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKS 162

[Close]

BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UB2G2_MOUSE (Ubiquitin-conjugating enzyme E2 G2 OS=Mus musculus GN=Ube2g2 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.621e-26
Identity = 44/93 (47.31%), Postives = 57/93 (61.29%), Query Frame = 2

Query:   89 MSTPAKKRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL 364
            M+  A KRLM ++K+L  +PP GI   P  + N   W A+I GP+DT ++ G F   L F  DYP  PP +RF   MFHPNIY DG +C+ IL
Sbjct:    1 MAGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISIL 93

HSP 2 Score: 46.595 bits (109), Expect = 3.621e-26
Identity = 18/53 (33.96%), Postives = 37/53 (69.81%), Query Frame = 3

Query:  375 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQS 533
            WSP+  V  IL S+ S+L +PN  S AN +A++++ +++ ++ +  ++IV++S
Sbjct:  110 WSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKS 162

[Close]

BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UB2G2_HUMAN (Ubiquitin-conjugating enzyme E2 G2 OS=Homo sapiens GN=UBE2G2 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.621e-26
Identity = 44/93 (47.31%), Postives = 57/93 (61.29%), Query Frame = 2

Query:   89 MSTPAKKRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL 364
            M+  A KRLM ++K+L  +PP GI   P  + N   W A+I GP+DT ++ G F   L F  DYP  PP +RF   MFHPNIY DG +C+ IL
Sbjct:    1 MAGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISIL 93

HSP 2 Score: 46.595 bits (109), Expect = 3.621e-26
Identity = 18/53 (33.96%), Postives = 37/53 (69.81%), Query Frame = 3

Query:  375 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQS 533
            WSP+  V  IL S+ S+L +PN  S AN +A++++ +++ ++ +  ++IV++S
Sbjct:  110 WSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKS 162

[Close]

BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UB2G2_BOVIN (Ubiquitin-conjugating enzyme E2 G2 OS=Bos taurus GN=UBE2G2 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.621e-26
Identity = 44/93 (47.31%), Postives = 57/93 (61.29%), Query Frame = 2

Query:   89 MSTPAKKRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL 364
            M+  A KRLM ++K+L  +PP GI   P  + N   W A+I GP+DT ++ G F   L F  DYP  PP +RF   MFHPNIY DG +C+ IL
Sbjct:    1 MAGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISIL 93

HSP 2 Score: 46.595 bits (109), Expect = 3.621e-26
Identity = 18/53 (33.96%), Postives = 37/53 (69.81%), Query Frame = 3

Query:  375 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQS 533
            WSP+  V  IL S+ S+L +PN  S AN +A++++ +++ ++ +  ++IV++S
Sbjct:  110 WSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKVAKQIVQKS 162

[Close]

BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBC7_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC7 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.135e-26
Identity = 41/95 (43.16%), Postives = 62/95 (65.26%), Query Frame = 2

Query:   89 MSTPAKKRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN 370
            MS  A+KRL+++ ++L +D P GI   P+ +NNI +W+ +I GP DTP+  G F   L+F +DYP  PP + F   + HPNIY +G +C+ IL +
Sbjct:    1 MSKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHS 95

HSP 2 Score: 45.4394 bits (106), Expect = 6.135e-26
Identity = 20/47 (42.55%), Postives = 31/47 (65.96%), Query Frame = 3

Query:  375 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVR 515
            WSP+  V  IL S+ S+L +PN  S AN +A  L+ +N+ E+ R+V+
Sbjct:  110 WSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVK 156

[Close]

BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBC1_COLGL (Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletotrichum gloeosporioides GN=UBC1 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 8.033e-26
Identity = 42/90 (46.67%), Postives = 59/90 (65.56%), Query Frame = 2

Query:  101 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN 370
            A KR+ ++   L +DPP+  S  P   ++  W A I GP D+P+ GG F L + F  DYP KPP V F +R++HPNI ++GSICLDIL++
Sbjct:    2 AFKRINKELTDLGRDPPSSCSAGPVGEDLFHWQATIMGPGDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRD 91

HSP 2 Score: 42.743 bits (99), Expect = 8.033e-26
Identity = 18/48 (37.50%), Postives = 27/48 (56.25%), Query Frame = 3

Query:  375 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 518
            WSP   ++ +L SI S+L DPNP+ P   E A ++  ++  Y    RE
Sbjct:   93 WSPALTISKVLLSICSMLTDPNPDEPLVPEIAHVYKTDRARYEATARE 140

[Close]

BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBE2N_DROME (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.044e-25
Identity = 38/88 (43.18%), Postives = 63/88 (71.59%), Query Frame = 2

Query:  107 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN 370
            +R++++ +RL Q+P  GI+  P +NN   ++ ++ GP+D+P++GG FKL L   EDYP   P VRF+++++HPNI   G ICLD+L++
Sbjct:    6 RRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKD 93

HSP 2 Score: 45.0542 bits (105), Expect = 1.044e-25
Identity = 22/51 (43.14%), Postives = 29/51 (56.86%), Query Frame = 3

Query:  366 KIXWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 518
            K  WSP   +  IL SIQ+LL  PNP+ P  ++ A L+  N+ E  R  RE
Sbjct:   92 KDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNARE 142

[Close]

BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBC1_MAGGR (Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe grisea GN=UBC1 PE=3 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.046e-25
Identity = 42/90 (46.67%), Postives = 59/90 (65.56%), Query Frame = 2

Query:  101 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN 370
            A KR+ ++   L +DPP+  S  P   ++  W A I GP D+P+ GG F L + F  DYP KPP V F +R++HPNI ++GSICLDIL++
Sbjct:    2 ALKRINKELTDLGRDPPSSCSAGPVGEDLFHWQATIMGPSDSPYAGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRD 91

HSP 2 Score: 42.3578 bits (98), Expect = 1.046e-25
Identity = 18/48 (37.50%), Postives = 27/48 (56.25%), Query Frame = 3

Query:  375 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 518
            WSP   ++ +L SI S+L DPNP+ P   E A ++   + +Y    RE
Sbjct:   93 WSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTARAQYESTARE 140

The following BLAST results are available for this feature:

BLAST of EY675113 vs. ExPASy Swiss-Prot

BLAST of EY675113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 228


Match Name	E-value	Identity	Description
UBC15_SCHPO	1.641e-26	39.13	Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccha...	[more]
UBC4_SCHPO	2.798e-26	47.78	Ubiquitin-conjugating enzyme E2 4 OS=Schizosacchar...	[more]
UB2G2_PONAB	3.621e-26	47.31	Ubiquitin-conjugating enzyme E2 G2 OS=Pongo abelii...	[more]
UB2G2_MOUSE	3.621e-26	47.31	Ubiquitin-conjugating enzyme E2 G2 OS=Mus musculus...	[more]
UB2G2_HUMAN	3.621e-26	47.31	Ubiquitin-conjugating enzyme E2 G2 OS=Homo sapiens...	[more]
UB2G2_BOVIN	3.621e-26	47.31	Ubiquitin-conjugating enzyme E2 G2 OS=Bos taurus G...	[more]
UBC7_YEAST	6.135e-26	43.16	Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharo...	[more]
UBC1_COLGL	8.033e-26	46.67	Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletot...	[more]
UBE2N_DROME	1.044e-25	43.18	Ubiquitin-conjugating enzyme E2 N OS=Drosophila me...	[more]
UBC1_MAGGR	1.046e-25	46.67	Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnapor...	[more]

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Properties


Property Name	Value
Genbank description	CS00-C1-401-006-C04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY675113 ID=EY675113; Name=EY675113; organism=Citrus sinensis; type=EST; length=988bp
TTCTTTCTCTAGAAGCTTCTCCTCTCATTCTCCCCCCTTACCCCCTCTGC
AAAAGCCGCTTCTCAGTTTTGCTCTCTAAAACGCCACTATGTCAACACCG
GCGAAGAAGCGGCTGATGCGGGACTTCAAGCGCCTCCAGCAAGATCCACC
CGCCGGAATCAGCGGGGCCCCTCAAGACAACAACATCATGTTATGGAACG
CCGTTATTTTTGGGCCTGATGATACTCCCTGGGACGGAGGTACGTTCAAG
TTGACTCTTCAGTTTACAGAGGATTATCCGAATAAACCTCCAACAGTTCG
GTTCGTTTCACGGATGTTTCATCCAAATATCTATGCGGATGGAAGTATCT
GCCTGGATATATTACAAAATCANGTGGAGTCCTATATATGATGTTGCAGC
TATACTGACCTCCATCCAGTCGCTGCTTTGTGATCCAAATCCAAACTCCC
CTGCAAATTCTGAAGCAGCTCGGCTGTTTAGTGAGAATAAACGAGAGTAC
AACCGAAGAGTGCGTGAAATAGTGGAGCAAAGCTGGACAGCCGACTAAAA
GTCCCATGAAAGCACCGGCCGGTTATGCTGGAGAAATAAAAGATGAAAAC
TGGGGCTGGTGGGGTTGGTTTGGTCAAAATAATGGAACCCGTATTCAATC
GGATTTCAGGTGCATTGTTAATTAAAAAAATCCCCTTCGAATCTTTCCTC
CCCAAAAACCCTGGGTGGAACCCTTGGTTATTTTTCCAACATTTCCCTCT
TCCTTTTCCAAAACTTTCCGGGTAAATGTAATTTTATTGGGGACATTTTG
GTAAGGGGGGTTTTTTGGGGGGCGGGAAAACCCTGTGGATGTTGTTCTTT
AAAAAAACCCCCCCAAAAAAGAAACCCCTTTTTTTTTTTGGGAAATTTTT
TTTATGGGGGGATATTTTTTTGGGGGGATTTGTGGTGGGCGGGGGGGCGC
CCAAAAAAAAATAAAAAAAAAAAAAGGAAACAAAAACA