EY675105
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675105 vs. ExPASy Swiss-Prot
Match: SECA_PSEAE (Protein translocase subunit secA OS=Pseudomonas aeruginosa GN=secA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 6.049e-25 Identity = 63/106 (59.43%), Postives = 69/106 (65.09%), Query Frame = 1 Query: 1 TLFSELLDSIKRDSIRVLSHVQVRREDPIXXXXXXXXXXXXXXXXMQFQHDEAPGLEAPEVLGEEVDVALAQAPV------RNEQKLGRNELCWCGSGKKFKHCHG 300 TLF ELLDSIKRD+IRVLSHVQVRREDP MQFQH EAP +E V GEE ++ APV RNEQK+GRNE C CGSGKK+KHCHG Sbjct: 809 TLFQELLDSIKRDTIRVLSHVQVRREDPAEEEARLRREAEELAKRMQFQHAEAPSMEQA-VAGEEEELPEGPAPVVPLEPVRNEQKIGRNEPCPCGSGKKYKHCHG 913
BLAST of EY675105 vs. ExPASy Swiss-Prot
Match: SECA_PSEAB (Protein translocase subunit secA OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=secA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 6.049e-25 Identity = 63/106 (59.43%), Postives = 69/106 (65.09%), Query Frame = 1 Query: 1 TLFSELLDSIKRDSIRVLSHVQVRREDPIXXXXXXXXXXXXXXXXMQFQHDEAPGLEAPEVLGEEVDVALAQAPV------RNEQKLGRNELCWCGSGKKFKHCHG 300 TLF ELLDSIKRD+IRVLSHVQVRREDP MQFQH EAP +E V GEE ++ APV RNEQK+GRNE C CGSGKK+KHCHG Sbjct: 809 TLFQELLDSIKRDTIRVLSHVQVRREDPAEEEARLRREAEELAKRMQFQHAEAPSMEQA-VAGEEEELPEGPAPVVPLEPVRNEQKIGRNEPCPCGSGKKYKHCHG 913
BLAST of EY675105 vs. ExPASy Swiss-Prot
Match: SECA_PSEA8 (Protein translocase subunit secA OS=Pseudomonas aeruginosa (strain LESB58) GN=secA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 6.049e-25 Identity = 63/106 (59.43%), Postives = 69/106 (65.09%), Query Frame = 1 Query: 1 TLFSELLDSIKRDSIRVLSHVQVRREDPIXXXXXXXXXXXXXXXXMQFQHDEAPGLEAPEVLGEEVDVALAQAPV------RNEQKLGRNELCWCGSGKKFKHCHG 300 TLF ELLDSIKRD+IRVLSHVQVRREDP MQFQH EAP +E V GEE ++ APV RNEQK+GRNE C CGSGKK+KHCHG Sbjct: 809 TLFQELLDSIKRDTIRVLSHVQVRREDPAEEEARLRREAEELAKRMQFQHAEAPSMEQA-VAGEEEELPEGPAPVVPLEPVRNEQKIGRNEPCPCGSGKKYKHCHG 913
BLAST of EY675105 vs. ExPASy Swiss-Prot
Match: SECA_PSEMY (Protein translocase subunit secA OS=Pseudomonas mendocina (strain ymp) GN=secA PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 1.348e-24 Identity = 60/99 (60.61%), Postives = 66/99 (66.67%), Query Frame = 1 Query: 4 LFSELLDSIKRDSIRVLSHVQVRREDPIXXXXXXXXXXXXXXXXMQFQHDEAPGLEAPEVLGEEVDVALAQAPVRNEQKLGRNELCWCGSGKKFKHCHG 300 LF ELL+SIKRD+IRVLSHVQVRREDP MQFQH EA L A + EE VA A APVR+E K+GRNE C CGSGKK+KHCHG Sbjct: 810 LFQELLESIKRDTIRVLSHVQVRREDPAEEEARLRREAEALAERMQFQHAEASALAAEQDGAEEGAVATATAPVRSENKVGRNEPCPCGSGKKYKHCHG 908
BLAST of EY675105 vs. ExPASy Swiss-Prot
Match: SECA_PSEA7 (Protein translocase subunit secA OS=Pseudomonas aeruginosa (strain PA7) GN=secA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.348e-24 Identity = 62/106 (58.49%), Postives = 69/106 (65.09%), Query Frame = 1 Query: 1 TLFSELLDSIKRDSIRVLSHVQVRREDPIXXXXXXXXXXXXXXXXMQFQHDEAPGLEAPEVLGEEVDVALAQAPV------RNEQKLGRNELCWCGSGKKFKHCHG 300 TLF ELLDSIKRD+IRVLSHVQVRREDP MQFQH EAP +E V GE+ ++ APV RNEQK+GRNE C CGSGKK+KHCHG Sbjct: 809 TLFQELLDSIKRDTIRVLSHVQVRREDPAEEEARLRREAEELAKRMQFQHAEAPSMEQA-VAGEDEELPEGPAPVVPLEPVRNEQKIGRNEPCPCGSGKKYKHCHG 913
BLAST of EY675105 vs. ExPASy Swiss-Prot
Match: SECA_PSEU5 (Protein translocase subunit secA OS=Pseudomonas stutzeri (strain A1501) GN=secA PE=3 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 1.261e-22 Identity = 59/105 (56.19%), Postives = 66/105 (62.86%), Query Frame = 1 Query: 1 TLFSELLDSIKRDSIRVLSHVQVRREDPIXXXXXXXXXXXXXXXXMQFQHDEAPGLEAPEVLGEEVD--VALAQAPVRNEQKLGRNELCWCGSGKKFKHCHGXNQ 309 TLF +LL+SIKRDSIRVLSHVQVRREDP MQFQH E L+ PE EV+ +A A VR E K+GRNE C CGSGKK+KHCHG Q Sbjct: 809 TLFQDLLESIKRDSIRVLSHVQVRREDPAEEEARLRHEAEELAKRMQFQHAEVSALDQPEEEPAEVEGQPDVAVASVRTEPKIGRNEPCPCGSGKKYKHCHGQVQ 913
BLAST of EY675105 vs. ExPASy Swiss-Prot
Match: SECA_AZOVD (Protein translocase subunit secA OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=secA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 4.486e-20 Identity = 55/104 (52.88%), Postives = 64/104 (61.54%), Query Frame = 1 Query: 4 LFSELLDSIKRDSIRVLSHVQVRREDPIXXXXXXXXXXXXXXXXMQFQHDEAPGLEAPEVLGEEVDVAL-----AQAPVRNEQKLGRNELCWCGSGKKFKHCHG 300 LF LL+SIKRD+IRVLSHVQVRREDP MQFQH A L AP+ ++++V APVR E K+GRNE C CGSGKK+KHCHG Sbjct: 810 LFQSLLESIKRDAIRVLSHVQVRREDPAEEEERLRREAEALARRMQFQHAAASAL-APQAEEDDLEVVEEVPLPGTAPVRPEPKIGRNEPCPCGSGKKYKHCHG 912
BLAST of EY675105 vs. ExPASy Swiss-Prot
Match: SECA_XANCP (Protein translocase subunit secA OS=Xanthomonas campestris pv. campestris GN=secA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.183e-12 Identity = 42/104 (40.38%), Postives = 61/104 (58.65%), Query Frame = 1 Query: 4 LFSELLDSIKRDSIRVLSHVQVRREDPIXXXXXXXXXXXXXXXXM-QFQHDEAPGLEAPEVLGEEVDVALAQAPV----RNEQKLGRNELCWCGSGKKFKHCHG 300 LFSE+L+++KR+ I +L+ V++R E+ + QFQH +A G A E + E++ A PV R+E K+GRN+ C CGSGKK+KHCHG Sbjct: 807 LFSEMLENVKREVINLLARVRIRSEEEVAELEEQERRQAEARLLASQFQHQDAGGYGADEEV-EQMQGGNAPVPVSQVTRDEPKVGRNDPCPCGSGKKYKHCHG 909
BLAST of EY675105 vs. ExPASy Swiss-Prot
Match: SECA_XANCB (Protein translocase subunit secA OS=Xanthomonas campestris pv. campestris (strain B100) GN=secA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.183e-12 Identity = 42/104 (40.38%), Postives = 61/104 (58.65%), Query Frame = 1 Query: 4 LFSELLDSIKRDSIRVLSHVQVRREDPIXXXXXXXXXXXXXXXXM-QFQHDEAPGLEAPEVLGEEVDVALAQAPV----RNEQKLGRNELCWCGSGKKFKHCHG 300 LFSE+L+++KR+ I +L+ V++R E+ + QFQH +A G A E + E++ A PV R+E K+GRN+ C CGSGKK+KHCHG Sbjct: 807 LFSEMLENVKREVINLLARVRIRSEEEVAELEEQERRQAEARLLASQFQHQDAGGYGADEEV-EQMQGGNAPVPVSQVTRDEPKVGRNDPCPCGSGKKYKHCHG 909
BLAST of EY675105 vs. ExPASy Swiss-Prot
Match: SECA_XANC8 (Protein translocase subunit secA OS=Xanthomonas campestris pv. campestris (strain 8004) GN=secA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.183e-12 Identity = 42/104 (40.38%), Postives = 61/104 (58.65%), Query Frame = 1 Query: 4 LFSELLDSIKRDSIRVLSHVQVRREDPIXXXXXXXXXXXXXXXXM-QFQHDEAPGLEAPEVLGEEVDVALAQAPV----RNEQKLGRNELCWCGSGKKFKHCHG 300 LFSE+L+++KR+ I +L+ V++R E+ + QFQH +A G A E + E++ A PV R+E K+GRN+ C CGSGKK+KHCHG Sbjct: 807 LFSEMLENVKREVINLLARVRIRSEEEVAELEEQERRQAEARLLASQFQHQDAGGYGADEEV-EQMQGGNAPVPVSQVTRDEPKVGRNDPCPCGSGKKYKHCHG 909 The following BLAST results are available for this feature:
BLAST of EY675105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675105 ID=EY675105; Name=EY675105; organism=Citrus sinensis; type=EST; length=978bpback to top |