EY675053

Overview
NameEY675053
Unique NameEY675053
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length436
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8521 contig Csv1_Contig8521:37..471. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_JANMA (Leucyl/phenylalanyl-tRNA--protein transferase OS=Janthinobacterium sp. (strain Marseille) GN=aat PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 2.089e-30
Identity = 59/120 (49.17%), Postives = 81/120 (67.50%), Query Frame = 3
Query:    3 AFATVMAHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQHV 362
            AF  VM   +APR+G+ GTWI+  +   Y   H+ GY HS + W+ G+L G  YG+++G+MF+GESMF R P+ASKIALAYLV ++    V  IDCQQ T HLA+LGA P+  + F+  +
Sbjct:  104 AFEEVMRACAAPRNGEGGTWISDEIIAGYTGLHKLGYAHSSELWLQGKLVGAAYGVSIGQMFYGESMFARVPDASKIALAYLVHFLRNHDVSMIDCQQETSHLATLGAAPIARTEFISRL 223          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_BURPP (Leucyl/phenylalanyl-tRNA--protein transferase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=aat PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 2.089e-30
Identity = 64/120 (53.33%), Postives = 83/120 (69.17%), Query Frame = 3
Query:    6 FATVM-AHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQHV 362
            FA+VM A   APR GQ GTWITA + +AY + H  G  HSI+TW +G+  GGLYG++ G+MFFGESMF    +ASK+ALA LV ++    ++ IDCQQ+T HLASLG R +    F+ HV
Sbjct:  100 FASVMRACAQAPRRGQRGTWITADVVEAYSSLHRVGDAHSIETWFEGKRVGGLYGVSFGKMFFGESMFAEVTDASKMALAALVGHLRRHEIEMIDCQQNTSHLASLGGREITRKSFIAHV 219          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_BURXL (Leucyl/phenylalanyl-tRNA--protein transferase OS=Burkholderia xenovorans (strain LB400) GN=aat PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.729e-30
Identity = 64/120 (53.33%), Postives = 82/120 (68.33%), Query Frame = 3
Query:    6 FATVM-AHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQHV 362
            FA VM A   APR GQ GTWITA + +AY + H  G  HSI+TW +G+  GGLYG++ G+MFFGESMF    +ASK+ALA LV ++    ++ IDCQQ+T HLASLG R +    F+ HV
Sbjct:  100 FAAVMRACAQAPRRGQRGTWITADVVEAYSSLHRVGDAHSIETWFEGRRVGGLYGVSFGKMFFGESMFAEVTDASKMALAALVGHLRRHEIEMIDCQQNTSHLASLGGREIARKAFIAHV 219          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_AZOSB (Leucyl/phenylalanyl-tRNA--protein transferase OS=Azoarcus sp. (strain BH72) GN=aat PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 3.564e-30
Identity = 61/116 (52.59%), Postives = 80/116 (68.97%), Query Frame = 3
Query:    3 AFATVMAHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRF 350
            AFA V+   +APR+   GTWIT  +R AYL  HE GY HS+++W+DG+L GGLYG+ LGR FFGESMF+R  +ASK+ALA+L R++  +    IDCQ  T HL S+GA  +    F
Sbjct:   92 AFARVIEECAAPREPGGGTWITPEIRAAYLRMHELGYAHSVESWLDGRLVGGLYGMALGRAFFGESMFSRVSDASKVALAHLARFLEQRDFGVIDCQMTTPHLLSMGAHEIARREF 207          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_BURTA (Leucyl/phenylalanyl-tRNA--protein transferase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=aat PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.655e-30
Identity = 67/120 (55.83%), Postives = 81/120 (67.50%), Query Frame = 3
Query:    6 FATVM-AHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQHV 362
            FA VM A   APR GQ GTWITA +  AY + H AG  HSI+TW+DG+  GGLYG++ G MFFGESM+    +ASKIALA LV ++    V  IDCQQ+T HLASLG R +    F+ HV
Sbjct:  100 FAGVMRACAQAPRRGQRGTWITAEIIDAYSSLHRAGDAHSIETWLDGRRVGGLYGVSFGGMFFGESMYADVSDASKIALAALVAHLREHRVVMIDCQQNTSHLASLGGREIARKAFVAHV 219          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_BURCH (Leucyl/phenylalanyl-tRNA--protein transferase OS=Burkholderia cenocepacia (strain HI2424) GN=aat PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.655e-30
Identity = 65/120 (54.17%), Postives = 83/120 (69.17%), Query Frame = 3
Query:    6 FATVM-AHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQHV 362
            FA VM A   APR GQ GTWITA +  AY + + +G  HSI+TW DG+  GGLYG++ GRMFFGESM+    +ASKIALA L+ ++  Q ++ IDCQQ+T HLASLG R +    F+ HV
Sbjct:  100 FAGVMRACAQAPRRGQRGTWITAEIIDAYTSLYRSGNAHSIETWHDGRRVGGLYGVSFGRMFFGESMYADVTDASKIALAALIAHLREQRLEMIDCQQNTSHLASLGGREIARKAFVAHV 219          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_BURCA (Leucyl/phenylalanyl-tRNA--protein transferase OS=Burkholderia cenocepacia (strain AU 1054) GN=aat PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.655e-30
Identity = 65/120 (54.17%), Postives = 83/120 (69.17%), Query Frame = 3
Query:    6 FATVM-AHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQHV 362
            FA VM A   APR GQ GTWITA +  AY + + +G  HSI+TW DG+  GGLYG++ GRMFFGESM+    +ASKIALA L+ ++  Q ++ IDCQQ+T HLASLG R +    F+ HV
Sbjct:  100 FAGVMRACAQAPRRGQRGTWITAEIIDAYTSLYRSGNAHSIETWHDGRRVGGLYGVSFGRMFFGESMYADVTDASKIALAALIAHLREQRLEMIDCQQNTSHLASLGGREIARKAFVAHV 219          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_BURM1 (Leucyl/phenylalanyl-tRNA--protein transferase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=aat PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 5.146e-29
Identity = 60/110 (54.55%), Postives = 77/110 (70.00%), Query Frame = 3
Query:   33 APRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQHV 362
            APR GQ GTWITA +  AY + + +G  HSI+TW DG+  GGLYG+  G+MFFGESM+    +ASKIALA LV ++   G++ IDCQQ+T HLASLG R +    F+ HV
Sbjct:  110 APRRGQRGTWITAEIIDAYSSLYRSGNAHSIETWHDGRRVGGLYGVAFGQMFFGESMYADVTDASKIALAALVAHLREHGLEMIDCQQNTSHLASLGGREIARKAFVAHV 219          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_CHRSD (Leucyl/phenylalanyl-tRNA--protein transferase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=aat PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 6.721e-29
Identity = 61/120 (50.83%), Postives = 80/120 (66.67%), Query Frame = 3
Query:    3 AFATVMAHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQHV 362
            AF  V+   +  R    GTWIT AM  AY   H  G  HS++ W DG+L GGLYGI LG +FFGESMF+R  +ASK+AL +L R+++A G + IDCQ HT HLASLGAR +  + F+ ++
Sbjct:   93 AFEAVITACATTRAAAEGTWITPAMHAAYYRLHIEGDAHSVEVWRDGELVGGLYGIALGGVFFGESMFSRVADASKVALVHLARHLAAHGGRLIDCQVHTPHLASLGARCIARTTFIDYL 212          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_PELCD (Leucyl/phenylalanyl-tRNA--protein transferase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=aat PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 8.778e-29
Identity = 64/119 (53.78%), Postives = 78/119 (65.55%), Query Frame = 3
Query:    3 AFATVM-AHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQ 356
            AF+ V+ A    PR   PGTWIT  M +AY   H  GY HS++ W +G L GGLYG+ LG  FFGESMF   PNASK+A A LVR+++  G   IDCQQ +RHL S+GA  VP + FLQ
Sbjct:   91 AFSEVIRACARTPRKEGPGTWITGDMLKAYELLHGLGYAHSVEAWYEGCLVGGLYGVALGGCFFGESMFHCMPNASKVAFATLVRHLAMLGYHLIDCQQSSRHLLSMGATEVPRAEFLQ 209          
The following BLAST results are available for this feature:
BLAST of EY675053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 305
Match NameE-valueIdentityDescription
LFTR_JANMA2.089e-3049.17Leucyl/phenylalanyl-tRNA--protein transferase OS=J... [more]
LFTR_BURPP2.089e-3053.33Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]
LFTR_BURXL2.729e-3053.33Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]
LFTR_AZOSB3.564e-3052.59Leucyl/phenylalanyl-tRNA--protein transferase OS=A... [more]
LFTR_BURTA4.655e-3055.83Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]
LFTR_BURCH4.655e-3054.17Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]
LFTR_BURCA4.655e-3054.17Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]
LFTR_BURM15.146e-2954.55Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]
LFTR_CHRSD6.721e-2950.83Leucyl/phenylalanyl-tRNA--protein transferase OS=C... [more]
LFTR_PELCD8.778e-2953.78Leucyl/phenylalanyl-tRNA--protein transferase OS=P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-D04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675053 ID=EY675053; Name=EY675053; organism=Citrus sinensis; type=EST; length=436bp
CGGCCTTCGCCACGGTGATGGCGCACCCCTCCGCGCCGCGCGATGGCCAG
CCGGGCACCTGGATCACCGCCGCCATGCGGCAGGCCTACCTCGCCTGGCA
CGAGGCCGGCTACGTCCACAGCATCAAAACCTGGATCGACGGCCAACTGG
CCGGCGGCCTGTACGGCATCAACCTGGGCCGCATGTTCTTCGGCGAATCG
ATGTTCACGCGCGCGCCCAACGCCTCCAAGATCGCGCTGGCCTACCTGGT
GCGCTACGTCAGCGCGCAAGGCGTGCAGTGGATCGACTGCCAACAACATA
CCCGCCATCTGGCCAGCCTGGGCGCGCGGCCGGTGCCACACTCGCGCTTC
CTGCAACACGTGCGCGCCGCCGCCGTGCAAGCCGCCGCTGGCCTGGTCGC
GCGGACGGCTGGACAGCACCGGGCGGCTGCTGCCCC
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