EY675053

Overview
NameEY675053
Unique NameEY675053
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length436
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8521 contig Csv1_Contig8521:37..471. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_BURP8 (Leucyl/phenylalanyl-tRNA--protein transferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=aat PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 9.705e-28
Identity = 59/118 (50.00%), Postives = 77/118 (65.25%), Query Frame = 3
Query:    9 ATVMAHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQHV 362
            A + A   APR GQ GTWIT+ +  AY   H  G  HSI+TW  G+  GGLYG++ G+MFFGESM+    +ASKIAL+ LV ++    ++ IDCQQ+T HLASLG R +    F+ HV
Sbjct:  102 AVMRACALAPRHGQRGTWITSDVIDAYSTLHRRGEAHSIETWHAGKRVGGLYGVSFGKMFFGESMYAEVTDASKIALSALVFHLRRHEIEMIDCQQNTSHLASLGGREIARKAFVAHV 219          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_PSEPF (Leucyl/phenylalanyl-tRNA--protein transferase OS=Pseudomonas fluorescens (strain Pf0-1) GN=aat PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.268e-27
Identity = 57/119 (47.90%), Postives = 78/119 (65.55%), Query Frame = 3
Query:    6 FATVMAHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQHV 362
            F  V+   +APR+   GTWIT AM+ AY+  H  G+ HS++ W +G+L GGLYG+ +G++FFGESMF+RA NASK   A LV+++   G   IDCQ  T HL SLGAR +    F  ++
Sbjct:   94 FDAVIRACAAPREYADGTWITEAMQDAYIELHRRGFAHSVEVWDEGELVGGLYGLAMGQLFFGESMFSRADNASKYGFATLVQHLREAGFVLIDCQMPTDHLHSLGARAISRQTFADYL 212          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_AZOVD (Leucyl/phenylalanyl-tRNA--protein transferase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=aat PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.268e-27
Identity = 58/119 (48.74%), Postives = 76/119 (63.87%), Query Frame = 3
Query:    6 FATVMAHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQHV 362
            FA V+   + PRD   GTWIT  MR+AY   H  G  HS++ W +G L GGLYG+ +G++FFGESMF+ A NASK+  A LV  +   G   IDCQ  T+HL SLGAR +P + F  ++
Sbjct:   94 FAAVIQACAGPRDYADGTWITPEMRKAYQELHHRGIAHSVEVWQNGVLVGGLYGLAIGQLFFGESMFSHADNASKVGFATLVERLERWGFVLIDCQMPTQHLQSLGARSIPRTEFSDYL 212          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_RHOFD (Leucyl/phenylalanyl-tRNA--protein transferase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=aat PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.162e-27
Identity = 60/114 (52.63%), Postives = 77/114 (67.54%), Query Frame = 3
Query:   15 VMAHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQ 356
            + A  S+ R GQ GTWI   MR AY   H  G  HS++TW++G+LAGGLY + LG+  FGESMF+R  +ASKIALA L+ +    GV+ IDCQQ+T HLASLGA  +    FL+
Sbjct:  110 IEACASSARIGQSGTWIVPDMRAAYGELHRVGLAHSVETWVNGELAGGLYCVALGKAVFGESMFSRVSDASKIALAALIGFCRHHGVKQIDCQQNTPHLASLGAGEISRDLFLK 223          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_PSEU2 (Leucyl/phenylalanyl-tRNA--protein transferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=aat PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.162e-27
Identity = 56/119 (47.06%), Postives = 79/119 (66.39%), Query Frame = 3
Query:    6 FATVMAHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQHV 362
            FA+V+   +APR     TWIT +M+ AY+  H  G+ HS++ W   +L GGLYG+ +G++FFGESMF+RA NASK+  A LV +++A G   IDCQ  T+HL S GAR +P   F  ++
Sbjct:   94 FASVIKACAAPRSYANETWITGSMQAAYVELHRRGHAHSVEVWDQDELVGGLYGLAMGQLFFGESMFSRADNASKVGFATLVEHLTAWGFVLIDCQMPTQHLHSFGARSIPRQTFADYL 212          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_PSEAB (Leucyl/phenylalanyl-tRNA--protein transferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=aat PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.162e-27
Identity = 59/119 (49.58%), Postives = 75/119 (63.03%), Query Frame = 3
Query:    6 FATVMAHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQHV 362
            F  V+   +APRD   GTWIT  M+ AY   H  G  HS++ W + QL GGLYG+ +GR+FFGESMF+RA NASK+    LVR++   G   IDCQ  TRHL SLGAR +    F  ++
Sbjct:   94 FRAVIQACAAPRDYADGTWITTPMQLAYQELHLRGIAHSVEVWQERQLVGGLYGLAMGRLFFGESMFSRADNASKVGFVTLVRHLRDAGFVLIDCQMPTRHLHSLGARAISRGEFADYL 212          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_PSEA8 (Leucyl/phenylalanyl-tRNA--protein transferase OS=Pseudomonas aeruginosa (strain LESB58) GN=aat PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.162e-27
Identity = 59/119 (49.58%), Postives = 75/119 (63.03%), Query Frame = 3
Query:    6 FATVMAHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQHV 362
            F  V+   +APRD   GTWIT  M+ AY   H  G  HS++ W + QL GGLYG+ +GR+FFGESMF+RA NASK+    LVR++   G   IDCQ  TRHL SLGAR +    F  ++
Sbjct:   94 FRAVIQACAAPRDYADGTWITTPMQLAYQELHLRGIAHSVEVWQERQLVGGLYGLAMGRLFFGESMFSRADNASKVGFVTLVRHLRDAGFVLIDCQMPTRHLHSLGARAISRGEFADYL 212          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_PSE14 (Leucyl/phenylalanyl-tRNA--protein transferase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=aat PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.162e-27
Identity = 56/119 (47.06%), Postives = 79/119 (66.39%), Query Frame = 3
Query:    6 FATVMAHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQHV 362
            FA+V+   +APR     TWIT +M+ AYL  H  G+ HS++ W   +L GGLYG+ +G++FFGESMF+RA NASK+  A LV++++  G   IDCQ  T+HL S GAR +P   F  ++
Sbjct:   94 FASVIKACAAPRSYANETWITGSMQDAYLELHRRGHAHSVEVWDQNELVGGLYGLAMGQLFFGESMFSRADNASKVGFATLVQHLTDWGFVLIDCQMPTQHLHSFGARSIPRQTFADYL 212          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_DECAR (Leucyl/phenylalanyl-tRNA--protein transferase OS=Dechloromonas aromatica (strain RCB) GN=aat PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.824e-27
Identity = 58/116 (50.00%), Postives = 77/116 (66.38%), Query Frame = 3
Query:    6 FATVMAH-PSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRF 350
            F  VMA+  S PR GQ GTWI+  M+ AY   HE G+ HS++T+ +G + GGLYG+ +G MF+GESMF+   +ASK+A A+LV Y+       IDCQ +T HLASLG R +P   F
Sbjct:   93 FRGVMANCASTPRPGQDGTWISPEMKHAYTRLHELGWAHSVETYEEGVMVGGLYGLAIGHMFYGESMFSHRTDASKVAFAHLVDYLVNNQFGMIDCQMYTDHLASLGGREIPRDAF 208          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_PSEMY (Leucyl/phenylalanyl-tRNA--protein transferase OS=Pseudomonas mendocina (strain ymp) GN=aat PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.688e-27
Identity = 58/119 (48.74%), Postives = 77/119 (64.71%), Query Frame = 3
Query:    6 FATVMAHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQHV 362
            FA V+A  +APR    GTWIT  M++AY   H+ G  HS++ W   QL GGLYG+ +G++FFGESMF+RA NASK+  A LV  +   G   IDCQ  T+HL S GAR +P + F  ++
Sbjct:   94 FAAVIAACAAPRAYADGTWITRGMQEAYRQLHQRGIAHSVEVWQGEQLVGGLYGLAIGQLFFGESMFSRADNASKVGFATLVGKLQEWGFVLIDCQMPTQHLHSFGARAIPRATFADYL 212          
The following BLAST results are available for this feature:
BLAST of EY675053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 305
Match NameE-valueIdentityDescription
LFTR_BURP89.705e-2850.00Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]
LFTR_PSEPF1.268e-2747.90Leucyl/phenylalanyl-tRNA--protein transferase OS=P... [more]
LFTR_AZOVD1.268e-2748.74Leucyl/phenylalanyl-tRNA--protein transferase OS=A... [more]
LFTR_RHOFD2.162e-2752.63Leucyl/phenylalanyl-tRNA--protein transferase OS=R... [more]
LFTR_PSEU22.162e-2747.06Leucyl/phenylalanyl-tRNA--protein transferase OS=P... [more]
LFTR_PSEAB2.162e-2749.58Leucyl/phenylalanyl-tRNA--protein transferase OS=P... [more]
LFTR_PSEA82.162e-2749.58Leucyl/phenylalanyl-tRNA--protein transferase OS=P... [more]
LFTR_PSE142.162e-2747.06Leucyl/phenylalanyl-tRNA--protein transferase OS=P... [more]
LFTR_DECAR2.824e-2750.00Leucyl/phenylalanyl-tRNA--protein transferase OS=D... [more]
LFTR_PSEMY3.688e-2748.74Leucyl/phenylalanyl-tRNA--protein transferase OS=P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-D04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675053 ID=EY675053; Name=EY675053; organism=Citrus sinensis; type=EST; length=436bp
CGGCCTTCGCCACGGTGATGGCGCACCCCTCCGCGCCGCGCGATGGCCAG
CCGGGCACCTGGATCACCGCCGCCATGCGGCAGGCCTACCTCGCCTGGCA
CGAGGCCGGCTACGTCCACAGCATCAAAACCTGGATCGACGGCCAACTGG
CCGGCGGCCTGTACGGCATCAACCTGGGCCGCATGTTCTTCGGCGAATCG
ATGTTCACGCGCGCGCCCAACGCCTCCAAGATCGCGCTGGCCTACCTGGT
GCGCTACGTCAGCGCGCAAGGCGTGCAGTGGATCGACTGCCAACAACATA
CCCGCCATCTGGCCAGCCTGGGCGCGCGGCCGGTGCCACACTCGCGCTTC
CTGCAACACGTGCGCGCCGCCGCCGTGCAAGCCGCCGCTGGCCTGGTCGC
GCGGACGGCTGGACAGCACCGGGCGGCTGCTGCCCC
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