EY675045

Overview
NameEY675045
Unique NameEY675045
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1014
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 6.914e-56
Identity = 96/176 (54.55%), Postives = 121/176 (68.75%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTATLSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIQGARTGWQPMSKNWG 622
            W +ARATFY              YG+L+ QGYG  TA LSTALFN G +CG+CY+I CVNDP+WCLPG++ +TATNFC          G WCNPPQ+HFDLS P+F  IAQY+AGVVPV Y+R+ C R GG++F   G+ YF ++L  NVGGAGD+  + ++G +TGW  M KNWG
Sbjct:   48 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNFCPPDYSKTE--GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWG 221          
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.627e-55
Identity = 102/178 (57.30%), Postives = 120/178 (67.42%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTATLSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIQGARTGWQPMSKNWG 622
            W  A ATFY              YG+LY  GYGT TA LSTALFN G SCG+C+ I C     +WC PGT I VTATNFC          GGWCNPP++HFD+SQP ++ IA YRAG+VPV Y+RVPC R GGIRF +NGHSYF LVL+TNVGG+G V  + I+G+ TGW  MS+NWG
Sbjct:   25 WTPAFATFYGGSDASGTMGGACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWCKPGTSITVTATNFCPPNYALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQMWIKGSGTGWMAMSRNWG 202          
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2)

HSP 1 Score: 215.698 bits (548), Expect = 3.431e-55
Identity = 96/176 (54.55%), Postives = 120/176 (68.18%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTATLSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIQGARTGWQPMSKNWG 622
            W +ARATFY              YGNL+ QGYG  TA LSTALFN+G +CG+CYEI C  DP+WCLPG++ +TATNFC            WCNPPQ+HFDLS  +F  IA+Y+AGVVPV Y+R+PC + GG++F   G+ YF +VLI NVGGAGD+  V ++G +TGW  M KNWG
Sbjct:   52 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWG 225          
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 1.703e-54
Identity = 94/181 (51.93%), Postives = 123/181 (67.96%), Query Frame = 2
Query:   92 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTATLSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIQGART-GWQPMSKNWG 622
            GW+ A ATFY              YGNLY+QGYGT TA LSTALFN+GL+CG CY++ C    D  WC PG ++ +TATNFC          GGWCNPP+ HFD++QP ++ I  YR G++PV Y+RVPC ++GG+RFTINGH YF LVL+TNVG AG + A+ ++G+++  W  M+ NWG
Sbjct:   33 GWVRAHATFYGGADASGTMGGACGYGNLYAQGYGTRTAALSTALFNDGLACGQCYKLVCDRKTDRTWCKPGVSVTITATNFCPPNWDLPSDSGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSIKAMDVKGSKSPDWMAMAHNWG 213          
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.189e-54
Identity = 100/193 (51.81%), Postives = 129/193 (66.84%), Query Frame = 2
Query:   77 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTATLSTALFNNGLSCGSCYEIKCVN----DPKWCLPG----TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIQ---GARTGWQPMSKNWG 622
            A   G W +A ATFY              YGN Y QGYGT+TA LS  +F +GLSCG+C+E++C      D + CLP     +I+VTAT+ C          GGWCNPP  HFDLSQP F  IA++++G+VPV+Y+RV C R+GG+RFTINGHSYFNLVL++NVGGAGDVHAV+++   G +  WQ M++NWG
Sbjct:   24 AAAAGRWTDAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATDLCPANHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARWQAMARNWG 216          

HSP 2 Score: 21.1718 bits (43), Expect = 2.189e-54
Identity = 10/21 (47.62%), Postives = 14/21 (66.67%), Query Frame = 3
Query:  621 GQNWENNTYLNGPKAGHFKVT 683
            GQNW++   L+G +A  F VT
Sbjct:  216 GQNWQSGALLDG-QALSFTVT 235          
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.190e-54
Identity = 97/181 (53.59%), Postives = 123/181 (67.96%), Query Frame = 2
Query:   92 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTATLSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIQGARTG-WQPMSKNWG 622
            GW+ A ATFY              YGNLY+ GY TNTA LSTALFN+G SCG CY+I C     P+WCL G +I +TATNFC          GGWCNPP+ HFD++QP F  IA+Y+AG+VP+ YK+V C R GG+RFTING +YF LVLI+NV G G++  V I+G+++  W+ MS+NWG
Sbjct:   27 GWLQAHATFYGGSDASGTMGGACGYGNLYTDGYKTNTAALSTALFNDGKSCGGCYQILCDATKVPQWCLKGKSITITATNFCPPNFAQASDNGGWCNPPRPHFDMAQPAFLTIAKYKAGIVPILYKKVGCRRSGGMRFTINGRNYFELVLISNVAGGGEISKVWIKGSKSNKWETMSRNWG 207          

HSP 2 Score: 24.2534 bits (51), Expect = 2.190e-54
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 3
Query:  621 GQNWENNTYLNGPKAGHFKV 680
            G N+++NTYLNG     FKV
Sbjct:  207 GANYQSNTYLNGQSLS-FKV 225          
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 2.224e-54
Identity = 96/185 (51.89%), Postives = 123/185 (66.49%), Query Frame = 2
Query:   77 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTATLSTALFNNGLSCGSCYEIKC--VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIQGARTGWQPMSKNWG 622
            A   GGW++  ATFY              YGNLY+QGYG   A LSTALFN G SCG CY I C     P+WC  GT + +TATN C          GGWCNPP+ HFD+SQP ++ I  YRAG+VPV Y++V C R+GG+RFT++G +YF LVLITNV G+G V A+S++G++TGW P+++NWG
Sbjct:   21 AAAAGGWVSGTATFYGGKDASGTMGGACGYGNLYTQGYGVYNAALSTALFNGGASCGQCYLIMCDASKTPEWCKAGTAVTITATNLCPPNWALANDDGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGSVQAMSVKGSKTGWIPLARNWG 205          
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 2.905e-54
Identity = 95/176 (53.98%), Postives = 119/176 (67.61%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTATLSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIQGARTGWQPMSKNWG 622
            W +ARATFY              YGNL+ QGYG  TA LSTALFN+G +CG+CYEI C  DP+WCLPG++ +TATNFC            WCNPPQ+HFDLS  +F  IA+Y+AGVVPV Y+R+PC + GG++F   G+ YF +VLI NVGGAGD+  V ++  +TGW  M KNWG
Sbjct:   58 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKENKTGWITMKKNWG 231          
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 3.794e-54
Identity = 95/180 (52.78%), Postives = 119/180 (66.11%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTATLSTALFNNGLSCGSCYEIKCVND--PKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIQGARTG-WQPMSKNWG 622
            W  A ATFY              YGNLYSQGYGT  A LSTALFN+G SCG CY+I C     P+WC PG T+ +TATNFC          GGWCNPP+ HFD++QP ++ I  Y AG++PV Y+RVPC ++GG+RFTINGH YF LVL+TNV  AG + ++ + G+ T  W PM++NWG
Sbjct:   39 WQKAHATFYGGADASGTMGGACGYGNLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGHDYFQLVLVTNVAAAGSIKSMEVMGSNTADWMPMARNWG 218          
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.794e-54
Identity = 96/177 (54.24%), Postives = 122/177 (68.93%), Query Frame = 2
Query:   98 INARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTATLSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIQGARTGWQPMSKNWG 622
            ++  ATFY              YGNLYS GYGTNTA LS+ALFN+G +CG CY+I C  ++ KWC  GT + +TATN C          GGWCNPP+QHFD++QP ++ I  YR G+VPV ++RV C R+GG+RFTING+SYF LVLITNVGG G + +V I+G +TGW  MS+NWG
Sbjct:   25 LSGTATFYGGSDASGTMGGACGYGNLYSTGYGTNTAALSSALFNDGAACGECYQITCDQSNSKWCKAGTSVTITATNLCPPDYSKPSNDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPGSIKSVQIKGTKTGWVTMSRNWG 201          
The following BLAST results are available for this feature:
BLAST of EY675045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
EXP23_ARATH6.914e-5654.55Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=... [more]
EXPA8_ORYSJ2.627e-5557.30Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP22_ARATH3.431e-5554.55Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=... [more]
EXP13_ORYSJ1.703e-5451.93Expansin-A13 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP21_ORYSJ2.189e-5451.81Expansin-A21 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP17_ARATH2.190e-5453.59Putative expansin-A17 OS=Arabidopsis thaliana GN=E... [more]
EXP28_ORYSJ2.224e-5451.89Expansin-A28 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP26_ARATH2.905e-5453.98Putative expansin-A26 OS=Arabidopsis thaliana GN=E... [more]
EXP23_ORYSJ3.794e-5452.78Expansin-A23 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP12_ORYSJ3.794e-5454.24Expansin-A12 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-C04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675045 ID=EY675045; Name=EY675045; organism=Citrus sinensis; type=EST; length=1014bp
GCTTCAATTTCTCCACAAAATGTATTTTGCTGGGTTTTTCTCGTTGGGTT
TCCTTGCATTGGTGTCCTCCGTTCATGCTAATGGAGGCGGTGGGTGGATC
AATGCTCGTGCCACTTTCTATGGTGGTGGCGATGCTTCAGGGACTATGGG
TGGGGCTTGTGGCTATGGGAATCTGTATAGCCAGGGTTATGGAACGAACA
CTGCAACCTTGAGCACGGCTTTGTTCAACAACGGTTTGAGCTGTGGGTCT
TGCTATGAGATTAAGTGTGTTAATGACCCCAAATGGTGCTTGCCCGGCAC
CATTATGGTCACAGCTACCAATTTTTGCCCACCGAACAACGCCCTCCCCA
ACAATGCAGGCGGTTGGTGCAATCCTCCGCAGCAACATTTTGATCTCTCT
CAGCCTGTGTTCCAACACATTGCTCAATACAGAGCTGGAGTTGTCCCTGT
AGCTTACAAGAGGGTACCCTGCGGAAGAAGGGGAGGCATCAGGTTCACAA
TCAATGGCCATTCCTACTTCAACCTAGTGTTGATCACCAACGTTGGTGGT
GCTGGTGATGTTCATGCTGTTTCAATTCAAGGGGCTAGAACTGGCTGGCA
GCCCATGTCAAAAAACTGGGGGCCAAAACTGGGAAAACAACACTTATCTC
AATGGGCCAAAGGCTGGTCATTTTAAGGTCACCCCAAACCGATGGCCGGC
ACTGGGGACTTTCCAACAATGGTTCCCCCCGGTTACCCGGGCCCTTTTGG
GCCAAACTTTACCCCCGGGTGGTCAAATTTCCCCCTAAAACCCACCCAAG
AAACCATTTAAAAAAATGGGGTTTTTAAAAACCCCTTTTTTTTTACCCAA
AAAAATTTCTTGGGGAAAAAAAAATTAATATATTTTTTTTTGTATTAGTA
AATATTTTTTACACAAAAAACAAAGGAGGGGAATATAATTTTTATTTATA
ATATATAAAAATAAAAAAAAAAGAAAAATATTCCCCCCTCTTTTGGGGGG
GGCGGGTTCAATAT
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