EY675045

Overview
NameEY675045
Unique NameEY675045
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1014
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 1.223e-44
Identity = 88/177 (49.72%), Postives = 113/177 (63.84%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTATLSTALFNNGLSCGSCYEIKCVNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIQGARTGWQPMSKNWG 622
            W +A+A++Y              +G+L   GYG  T  LSTALF  G +CG CYE+KCV+D K+CLPGT I+VTATNFC          GG CNPP  HF L    F+ IA ++AGV+P+ Y+RV C R GG+RF + G S+F  VLI+NVGGAGDV +V I+G  +GW  M +NWG
Sbjct:   33 WRSAKASYYAADPEDAIGGACG-FGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVDDLKYCLPGTSIVVTATNFCAPNFGLPADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDGGVRFAVAGRSFFLTVLISNVGGAGDVRSVKIKGTESGWLSMGRNWG 208          
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.766e-43
Identity = 92/196 (46.94%), Postives = 115/196 (58.67%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTATLSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGG--WCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIQ-GARTGWQPMSKNWG------PKLGKQHLS 649
            W  A ATFY              YGNLY+ GYGT+TA LST LF +G  CG+CY+++CV     C  G+  I VTATN C          GG  WCNPP+ HFDLS+P F  +A +RAG+VPV Y+RVPC R GG+RF + G+ Y+ L  + NV GAGDV  + ++ G   GW  MS NWG       +LG Q LS
Sbjct:   37 WTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTAS-CYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQAFAQLGGQALS 231          
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 5.682e-42
Identity = 83/179 (46.37%), Postives = 109/179 (60.89%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTATLSTALFNNGLSCGSCYEIKCV--NDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIQGARTGWQPMSKNWG 622
            W+   ATFY              YGNLY Q YG N A LST LFN+G SCG CY I C     P WC  G  I VT TN+           GGWCN  + +FD+SQP +++I  Y AG+VP+ Y++V C R GG+RF ING +YF LVL+TN+ G+G + ++S++G+ TGW  M++NWG
Sbjct:   23 WLPGTATFYGGADGSGTMGGACGYGNLYDQRYGINNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGKAITVTGTNY-----------GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMSVKGSCTGWIQMTRNWG 190          
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 5.682e-42
Identity = 85/182 (46.70%), Postives = 111/182 (60.99%), Query Frame = 2
Query:   92 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTATLSTALFNNGLSCGSCYEIKC--VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQY-RAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIQGAR-TGWQPMSKNWG 622
            GWI A AT+Y              Y N Y  G+G +TA LS  LF +G SCG CY+++C    DPKWCL G  + VTATNFC           GWCN P+ HFD+S P F  IA+    G+VPV Y+RV C RRGG+RFT+ G   FN+V+I+NVGG G V +V+++G++   W  M++NWG
Sbjct:   26 GWIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRGAAVTVTATNFCPTNNN-----NGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWG 202          
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 4.810e-41
Identity = 78/155 (50.32%), Postives = 104/155 (67.10%), Query Frame = 2
Query:  164 YGNLYSQGYGTNTATLSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIQGARTGWQPMSKNWG 622
            YG+L    YG  TA +S ALF  G +CG CYE++CVN   WCL G  T++VTAT+FC          GGWCN P++HF++S+  F  +A+ +A +VPV ++RV C R GG+RFTI G + F  VLITNV   G+V AV ++G+RTGW PM +NWG
Sbjct:   57 YGDLDIFRYGRYTAGVSGALFGRGSACGGCYEVRCVNHVLWCLRGSPTVVVTATDFCAPNLGLSDDYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITGGASFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWG 211          
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3)

HSP 1 Score: 166.777 bits (421), Expect = 1.828e-40
Identity = 82/177 (46.33%), Postives = 108/177 (61.02%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXX-YGNLYSQGYGTNTATLSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIQGARTGWQPMSKNWG 622
            W +ARA +Y               YG+L   GYG  TA LSTALFN+G SCG+CYEI C  +P+ CL G+I +TAT+ C            WC  P +HFDLS P+F  IAQ +A +VPV Y+RVPC + GG++F + G+     +L  NVGGAGD+ AVS +G++T W  MS+ WG
Sbjct:   45 WYDARAAYYGDIHGGGTELEGACGYGDLNKHGYGLATAALSTALFNSGASCGACYEIMCSPNPQGCLSGSIKITATDLCPPG-------SAWCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVSAKGSKTAWVVMSRYWG 214          
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 2.021e-39
Identity = 74/155 (47.74%), Postives = 104/155 (67.10%), Query Frame = 2
Query:  164 YGNLYSQGYGTNTATLSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIQGARTGWQPMSKNWG 622
            YG+L    +   +A LS  LFN G SCG+C E++CVN  +WCL G+  ++VTAT+FC          GGWCN P++H +LS   F  IA+ RA ++P+ Y+RV CGRRGG+RF+++G S+F  VLI+NVG  G+V  V ++G  T W PM++NWG
Sbjct:   53 YGDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSVVVTATDFCPPNSGLSSDYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEVVGVKVKGHTTAWIPMARNWG 207          
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 8.491e-38
Identity = 72/149 (48.32%), Postives = 96/149 (64.43%), Query Frame = 2
Query:  188 YGTNTATLSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIQ--GARTGWQPMSKNWG 622
            Y T TA LST LF +G  CG CYE++CV  P WC PG+  +++T TN C          GGWCNPP+ HFD++ P F  +AQ  AG+VPV Y+RVPC R GG+RF + G+ Y+ L+ + NVGGAGDV ++S++  G    W   + NWG
Sbjct:   85 YSTKTAALSTPLFADGNGCGQCYELRCVKSP-WCNPGSPSVVITGTNLCPPNWYLPNDDGGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTGGVRFCLQGNHYWLLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWG 232          
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.896e-29
Identity = 72/188 (38.30%), Postives = 104/188 (55.32%), Query Frame = 2
Query:   74 HANGG----GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTATLSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIQGA-RTGWQPMSKNWG 622
            H N G    G W++  ATFY               G   + GYG  TA +S ALF+NG  CG+CYE+K  +        T++VTATN                    +HFDL+ P F  IA+ + GVVPV+Y++V C R+GGI++TI G+  +N+V++ NVGGAGDV  ++++G  R  W P+ ++WG
Sbjct:   71 HVNHGRYKCGPWVDGHATFYGGRDASGTTEGGAC-GYKDADGYGAMTAAVSPALFDNGAGCGACYELKGDSGK------TVVVTATNQAPPPVNGMKG---------EHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLTVKGTKRVKWTPLQRSWG 242          
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 2.404e-16
Identity = 60/191 (31.41%), Postives = 85/191 (44.50%), Query Frame = 2
Query:   86 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTATLSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYKRVPCGRRGGIRFTINGHS--YFNLVLITNVGGAGDVHAVSIQGAR--TGWQPMSKNWG 622
            G GW +  AT+Y              Y +   Q  + +  A    +LF NG  CGSCY+IKC  + + C    + V  T+ C          GG C     HFD+S   F  +A          AGV+ + YKRVPC     + F ++  S  Y+  +L+    G GD+ AV I  AR   GW+ M ++WG
Sbjct:   42 GYGWSSGGATWYGGPQGDGSEGGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQIKCTGN-RACSGRPVTVVITDSC---------PGGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFAMNVAFKVDAGSNPYYLAILVQYANGDGDLAAVHIMEARGGGGWKAMQQSWG 222          
The following BLAST results are available for this feature:
BLAST of EY675045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
EXP10_ORYSJ1.223e-4449.72Expansin-A10 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP30_ORYSJ1.766e-4346.94Putative expansin-A30 OS=Oryza sativa subsp. japon... [more]
EXP20_ORYSJ5.682e-4246.37Expansin-A20 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP12_ARATH5.682e-4246.70Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=... [more]
EXP16_ORYSJ4.810e-4150.32Expansin-A16 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP21_ARATH1.828e-4046.33Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=... [more]
EXP20_ARATH2.021e-3947.74Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=... [more]
EXP17_ORYSJ8.491e-3848.32Expansin-A17 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP26_ORYSJ1.896e-2938.30Expansin-A26 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPB5_ORYSJ2.404e-1631.41Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXP... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-C04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675045 ID=EY675045; Name=EY675045; organism=Citrus sinensis; type=EST; length=1014bp
GCTTCAATTTCTCCACAAAATGTATTTTGCTGGGTTTTTCTCGTTGGGTT
TCCTTGCATTGGTGTCCTCCGTTCATGCTAATGGAGGCGGTGGGTGGATC
AATGCTCGTGCCACTTTCTATGGTGGTGGCGATGCTTCAGGGACTATGGG
TGGGGCTTGTGGCTATGGGAATCTGTATAGCCAGGGTTATGGAACGAACA
CTGCAACCTTGAGCACGGCTTTGTTCAACAACGGTTTGAGCTGTGGGTCT
TGCTATGAGATTAAGTGTGTTAATGACCCCAAATGGTGCTTGCCCGGCAC
CATTATGGTCACAGCTACCAATTTTTGCCCACCGAACAACGCCCTCCCCA
ACAATGCAGGCGGTTGGTGCAATCCTCCGCAGCAACATTTTGATCTCTCT
CAGCCTGTGTTCCAACACATTGCTCAATACAGAGCTGGAGTTGTCCCTGT
AGCTTACAAGAGGGTACCCTGCGGAAGAAGGGGAGGCATCAGGTTCACAA
TCAATGGCCATTCCTACTTCAACCTAGTGTTGATCACCAACGTTGGTGGT
GCTGGTGATGTTCATGCTGTTTCAATTCAAGGGGCTAGAACTGGCTGGCA
GCCCATGTCAAAAAACTGGGGGCCAAAACTGGGAAAACAACACTTATCTC
AATGGGCCAAAGGCTGGTCATTTTAAGGTCACCCCAAACCGATGGCCGGC
ACTGGGGACTTTCCAACAATGGTTCCCCCCGGTTACCCGGGCCCTTTTGG
GCCAAACTTTACCCCCGGGTGGTCAAATTTCCCCCTAAAACCCACCCAAG
AAACCATTTAAAAAAATGGGGTTTTTAAAAACCCCTTTTTTTTTACCCAA
AAAAATTTCTTGGGGAAAAAAAAATTAATATATTTTTTTTTGTATTAGTA
AATATTTTTTACACAAAAAACAAAGGAGGGGAATATAATTTTTATTTATA
ATATATAAAAATAAAAAAAAAAGAAAAATATTCCCCCCTCTTTTGGGGGG
GGCGGGTTCAATAT
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