EY675045

Overview
NameEY675045
Unique NameEY675045
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1014
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXPB7_ORYSJ (Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXPB7 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.010e-14
Identity = 60/204 (29.41%), Postives = 89/204 (43.63%), Query Frame = 2
Query:   83 GGGGWINARATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTATLSTALFNNGLSCGSCYEIKCVNDPKWC-LPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYKRVPCGRRG-GIRFTI--NGHSYFNLVLITNVGGAGDVHAV----------SIQGARTG-WQPMSKNWG 622
            GGGGW+NARAT+Y               G  N+    +   T+  +  LF +G  CGSCY+I+CV  P    LP T+++T  N+                    HFDLS   F  +A+         AG++ + ++RVPC   G  + F +    +  +  +L+    G GDV  V           + G  TG W PM ++WG
Sbjct:   88 GGGGWLNARATWYGAPNGAGPDDNGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRCVGHPACSGLPETVIITDMNYYPVSL--------------YHFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRRVPCQYPGLTVTFHVEQGSNPVYMAILVEYENGDGDVVQVDLMESRYSTGGVDGTPTGVWTPMRESWG 277          
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.319e-14
Identity = 58/188 (30.85%), Postives = 82/188 (43.62%), Query Frame = 2
Query:   92 GWINARATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTATLSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYKRVPCGRRG-GIRFTIN--GHSYFNLVLITNVGGAGDVHAVSIQGARTGWQPMSKNWG 622
            GW  A AT+Y              Y     Q  + +  A  S +L+  G  CG+CYE+KC  +   C      V  T+ C          GG C     HFD+S      +A+         AG++ V Y+RVPC   G  I F ++   + ++  VLI    G GD++AV +  A  GW PM +NWG
Sbjct:   63 GWAAAGATYYGAPNGDGSDGGACGYQTAVGQRPFSSMIAAGSPSLYKGGKGCGACYEVKCTTNAA-CSGQPATVVITDECP---------GGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPFYFEVLIEFEDGDGDLNAVDLMEAGCGWTPMVQNWG 240          
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.723e-14
Identity = 56/193 (29.02%), Postives = 82/193 (42.49%), Query Frame = 2
Query:   92 GWINARATFYXXXXXXXXXXXXXXY-GNLYSQGYGTNTATLSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYKRVPCGRRG---GIRFTINGHSYFNLVLITNVGGAGDVHAVSI-----QGARTGWQPMSKNWG 622
            GW    AT+Y              Y G++    + +  A  S +++ +G  CGSCY++KC  +P  C    + V  T+ C          GG C     HFDLS   F  +A+         AG +PV Y RVPC  +G     R     + Y+  VL+ +  G GD+ AV +      G    W  M ++WG
Sbjct:   37 GWSIGGATWYGPANGSGTDGGACGYQGDVGQPPFNSMIAAGSPSIYESGKGCGSCYQVKCSGNPS-CSGKPVTVVLTDLC---------PGGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAMQQSWG 219          
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.939e-14
Identity = 57/190 (30.00%), Postives = 84/190 (44.21%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXXY-GNLYSQGYGTNTATLSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIA------QYR-AGVVPVAYKRVPCGRRGGIRFT----INGHSYFNLVLITNVGGAGDVHAVSIQ--GARTGWQPMSKNWG 622
            W N  AT+Y              Y G ++   + +  A  S +++ +GL CGSCY++KC  +   C    + V  T+ C          GG C     HFDLS   F  +A      Q R AGV+ + Y RVPC   GG++ T    +  +  +  VL+    G GD+  V +   GA   W  M ++WG
Sbjct:   37 WSNGGATWYGAANGAGSDGGACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSA-CSGNPVTVVLTDEC---------PGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVKLTFVVDVGSNPNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWG 215          
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXB18_ORYSJ (Expansin-B18 OS=Oryza sativa subsp. japonica GN=EXPB18 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 8.550e-14
Identity = 60/191 (31.41%), Postives = 83/191 (43.46%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTATLSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIA------QYR-AGVVPVAYKRVPCGRRGGIRFTI-----NGHSYFNLVLITNVGGAGDVHAVSIQ--GARTGWQPMSKNWG 622
            W N  AT+Y              Y     Q  + +  A  S +++ +GL CGSCY++KC  +   C    + V  T+ C          GG C     HFDLS   F  +A      Q R AGV+ + Y RVPC   GG+  T      +  SYF  VL+    G GD+  + +   GA   W PM ++WG
Sbjct:   37 WSNGGATWYGAANGAGSDGGACGYQAAVDQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCSGNSA-CSGNPVTVVLTDEC---------PGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVMLTFAVDAGSNPSYF-AVLVKYENGDGDLSGMDLMQTGAGAAWTPMQQSWG 215          
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXPB3_ORYSJ (Expansin-B3 OS=Oryza sativa subsp. japonica GN=EXPB3 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.045e-11
Identity = 57/191 (29.84%), Postives = 84/191 (43.98%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTATLSTALFNNGLSCGSCYEIKCVNDPKWC-LPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYKRVPCGRRG-GIRFTINGHS---YFNLVLITNVGGAGDVHAVSIQGART-GWQPMSKNWG 622
            W  ARAT+Y               G  N     + + T+  +  +F +G  CGSCY+I+CVN P     P T+++T  N+                  + HFDLS   F  +A+         AG++ + +KRVPC   G  + F +   S   YF  VL+    G GDV  V +  A +  W PM ++WG
Sbjct:   42 WEVARATWYGAPTGAGPDDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCVNHPACSGNPETVIITDMNYYPV--------------SKYHFDLSGTAFGAMAKPGQNDQLRHAGIIDIQFKRVPCNFPGLKVTFHVEEGSNPVYF-AVLVEYEDGDGDVVQVDLMEANSQSWTPMRESWG 217          
BLAST of EY675045 vs. ExPASy Swiss-Prot
Match: EXPB3_ARATH (Expansin-B3 OS=Arabidopsis thaliana GN=EXPB3 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 3.041e-11
Identity = 55/189 (29.10%), Postives = 81/189 (42.86%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXXYGNLYS-QGYGTNTATLSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIA-------QYRAGVVPVAYKRVPCGRRG-GIRFTINGHS--YFNLVLITNVGGAGDVHAVSIQ--GARTGWQPMSKNWG 622
            W+ A AT+Y              YG L   +        ++  LF NG  CG+CY+++C+ D   C    + V  T+ C             C+    HFDLS  VF  +A           G++PV Y+R  C  RG  I F +N  S  ++  +L+    G GD+ ++ I+  GAR  W  M   WG
Sbjct:   36 WLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVNPILFKNGEGCGACYKVRCL-DKSICSRRAVTVIITDECPG-----------CSKTSTHFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAGARE-WLEMKHVWG 211          
The following BLAST results are available for this feature:
BLAST of EY675045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
EXPB7_ORYSJ1.010e-1429.41Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXB11_ORYSJ1.319e-1430.85Expansin-B11 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXB14_ORYSJ1.723e-1429.02Putative expansin-B14 OS=Oryza sativa subsp. japon... [more]
EXB15_ORYSJ2.939e-1430.00Expansin-B15 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXB18_ORYSJ8.550e-1431.41Expansin-B18 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPB3_ORYSJ1.045e-1129.84Expansin-B3 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPB3_ARATH3.041e-1129.10Expansin-B3 OS=Arabidopsis thaliana GN=EXPB3 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-C04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675045 ID=EY675045; Name=EY675045; organism=Citrus sinensis; type=EST; length=1014bp
GCTTCAATTTCTCCACAAAATGTATTTTGCTGGGTTTTTCTCGTTGGGTT
TCCTTGCATTGGTGTCCTCCGTTCATGCTAATGGAGGCGGTGGGTGGATC
AATGCTCGTGCCACTTTCTATGGTGGTGGCGATGCTTCAGGGACTATGGG
TGGGGCTTGTGGCTATGGGAATCTGTATAGCCAGGGTTATGGAACGAACA
CTGCAACCTTGAGCACGGCTTTGTTCAACAACGGTTTGAGCTGTGGGTCT
TGCTATGAGATTAAGTGTGTTAATGACCCCAAATGGTGCTTGCCCGGCAC
CATTATGGTCACAGCTACCAATTTTTGCCCACCGAACAACGCCCTCCCCA
ACAATGCAGGCGGTTGGTGCAATCCTCCGCAGCAACATTTTGATCTCTCT
CAGCCTGTGTTCCAACACATTGCTCAATACAGAGCTGGAGTTGTCCCTGT
AGCTTACAAGAGGGTACCCTGCGGAAGAAGGGGAGGCATCAGGTTCACAA
TCAATGGCCATTCCTACTTCAACCTAGTGTTGATCACCAACGTTGGTGGT
GCTGGTGATGTTCATGCTGTTTCAATTCAAGGGGCTAGAACTGGCTGGCA
GCCCATGTCAAAAAACTGGGGGCCAAAACTGGGAAAACAACACTTATCTC
AATGGGCCAAAGGCTGGTCATTTTAAGGTCACCCCAAACCGATGGCCGGC
ACTGGGGACTTTCCAACAATGGTTCCCCCCGGTTACCCGGGCCCTTTTGG
GCCAAACTTTACCCCCGGGTGGTCAAATTTCCCCCTAAAACCCACCCAAG
AAACCATTTAAAAAAATGGGGTTTTTAAAAACCCCTTTTTTTTTACCCAA
AAAAATTTCTTGGGGAAAAAAAAATTAATATATTTTTTTTTGTATTAGTA
AATATTTTTTACACAAAAAACAAAGGAGGGGAATATAATTTTTATTTATA
ATATATAAAAATAAAAAAAAAAGAAAAATATTCCCCCCTCTTTTGGGGGG
GGCGGGTTCAATAT
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