EY675044

Overview
NameEY675044
Unique NameEY675044
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1005
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC_ASFB7 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (strain Badajoz 1971 Vero-adapted) GN=UBC PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.827e-24
Identity = 56/153 (36.60%), Postives = 88/153 (57.52%), Query Frame = 2
Query:  113 LMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ--------WSPIYDVAAILTSIQSLLCDPNPNSPANSEAAR-----LFSENKREYNRRVREIVEQS 532
            L+ +++ L ++P      +  +NNI  W+ ++ GP DT ++GG FK  + F  +YP  PP + F S M+HPNIY DG +C+ IL           WSP   +  IL S+ SLL +PNP+SPAN +AA+     ++ E+   Y   V++ V++S
Sbjct:    6 LIAEYRHLIENPSENFKISVNENNITEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPKLTFTSEMWHPNIYPDGRLCISILHGDNAEEQGMTWSPAQKIDTILLSVISLLNEPNPDSPANVDAAKSYRKYVYKEDLESYPMEVKKTVKKS 158          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC_ASFP4 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) GN=UBC PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.387e-24
Identity = 55/153 (35.95%), Postives = 88/153 (57.52%), Query Frame = 2
Query:  113 LMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ--------WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLF-----SENKREYNRRVREIVEQS 532
            LM +++ L ++P      +  +NN+  W+ ++ GP DT ++GG FK  + F  +YP +PP + F S M+HPNIY+DG +C+ IL           WSP+  +  IL S+ SLL +PN +SPAN +AA+ +      E+   Y   V+  V++S
Sbjct:    6 LMAEYRHLTENPSENFKVSVNENNMTEWDVILKGPADTLYEGGLFKAKIGFPPNYPYEPPRLTFTSEMWHPNIYSDGRVCISILHGDNAEEQGMTWSPVQKIDTILLSVISLLNEPNTDSPANVDAAKSYRRFVHKEDLESYPMEVKRTVKKS 158          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 5.317e-24
Identity = 54/138 (39.13%), Postives = 87/138 (63.04%), Query Frame = 2
Query:  101 AKKRLMRDFKRLQQDPPAG--ISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLF-SENKREYN 502
            ++ RL +++K +Q++  A   I     D NI  W A+I GP +TP++GG F+L     E YP +PP VRF++++FHPN+ +  G ICLDIL+N WSP + + ++  +I +L+  P P+SP N ++  L  S + R +N
Sbjct:    4 SRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFN 141          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC_ASFM2 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) GN=UBC PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.944e-24
Identity = 55/153 (35.95%), Postives = 88/153 (57.52%), Query Frame = 2
Query:  113 LMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ--------WSPIYDVAAILTSIQSLLCDPNPNSPANSEAAR-----LFSENKREYNRRVREIVEQS 532
            L+ ++K L  +P      +  ++N+  W+ ++ GP DT ++GG FK  + F   YP +PP + F S M+HPNIY+DG +C+ IL           WSP   +  +L S+ SLL +PNP+SPAN +AA+     L+ E+   Y   V++ V++S
Sbjct:    6 LLAEYKNLIVNPSEHFKISVNEDNLTEWDVILKGPPDTLYEGGLFKAKIVFPPKYPYEPPRLTFTSEMWHPNIYSDGKLCISILHGDNAEEQGMTWSPAQKIDTVLLSVISLLNEPNPDSPANVDAAKSYRKYLYKEDLESYPMEVKKTVKKS 158          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC_ASFWA (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Warthog/Namibia/Wart80/1980) GN=UBC PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.184e-23
Identity = 55/153 (35.95%), Postives = 86/153 (56.21%), Query Frame = 2
Query:  113 LMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ--------WSPIYDVAAILTSIQSLLCDPNPNSPANSEAAR-----LFSENKREYNRRVREIVEQS 532
            LM +++ L ++P      +  +N++  W+ ++ GP DT ++GG FK  + F  +YP  PP + F S M+HPNIY DG +C+ IL           WSP   +  IL S+ SLL +PNP+SPAN +AA+     +  E+   Y   V+  V++S
Sbjct:    6 LMAEYRHLIENPSENFKISVNENDMTEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPRLTFTSEMWHPNIYPDGKLCISILHGDNAEEQGMTWSPAQKIDTILLSVISLLNEPNPDSPANVDAAKSYRKLMHKEDLESYPMEVKRTVKKS 158          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC9_CAEEL (SUMO-conjugating enzyme UBC9 OS=Caenorhabditis elegans GN=ubc-9 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.547e-23
Identity = 53/150 (35.33%), Postives = 82/150 (54.67%), Query Frame = 2
Query:   89 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 517
            MS  A  RL  + K  ++D P G    P  N     N+  W   I G  DT W+GG +++ + F +D+P+ PP  +F   +FHPN+Y  G++CL +L     W P   +  +L  IQ LL  PN   PA +EA +++ +N+ EY +RV++
Sbjct:    1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKK 150          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UB2R2_RABIT (Ubiquitin-conjugating enzyme E2 R2 OS=Oryctolagus cuniculus GN=UBE2R2 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.020e-23
Identity = 61/174 (35.06%), Postives = 97/174 (55.75%), Query Frame = 2
Query:   95 TPAKKRLMRDFKRLQQDPPAGISGAPQD-NNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSE--NKREYNRRVREIVEQSWTAE*KSNESTG 568
            T ++K LM + K LQ++P  G      D +++  W   IFGP +T ++GG FK  ++F  DYP  PPT RF+++M+HPNIY +G +C+ IL               +W+P  +V  IL S+ SLL +PN  SPAN +A+ +F +  + +  ++   EI+ +  +A     E  G
Sbjct:    7 TSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAEIIRKQVSATKAEAEKDG 180          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UB2R2_MOUSE (Ubiquitin-conjugating enzyme E2 R2 OS=Mus musculus GN=Ube2r2 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.020e-23
Identity = 61/174 (35.06%), Postives = 97/174 (55.75%), Query Frame = 2
Query:   95 TPAKKRLMRDFKRLQQDPPAGISGAPQD-NNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSE--NKREYNRRVREIVEQSWTAE*KSNESTG 568
            T ++K LM + K LQ++P  G      D +++  W   IFGP +T ++GG FK  ++F  DYP  PPT RF+++M+HPNIY +G +C+ IL               +W+P  +V  IL S+ SLL +PN  SPAN +A+ +F +  + +  ++   EI+ +  +A     E  G
Sbjct:    7 TSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAEIIRKQVSATKAEAEKDG 180          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UB2R2_HUMAN (Ubiquitin-conjugating enzyme E2 R2 OS=Homo sapiens GN=UBE2R2 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.020e-23
Identity = 61/174 (35.06%), Postives = 97/174 (55.75%), Query Frame = 2
Query:   95 TPAKKRLMRDFKRLQQDPPAGISGAPQD-NNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSE--NKREYNRRVREIVEQSWTAE*KSNESTG 568
            T ++K LM + K LQ++P  G      D +++  W   IFGP +T ++GG FK  ++F  DYP  PPT RF+++M+HPNIY +G +C+ IL               +W+P  +V  IL S+ SLL +PN  SPAN +A+ +F +  + +  ++   EI+ +  +A     E  G
Sbjct:    7 TSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAEIIRKQVSATKAEAEKDG 180          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: COP10_ARATH (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.020e-23
Identity = 51/144 (35.42%), Postives = 83/144 (57.64%), Query Frame = 2
Query:   86 TMSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 517
            T  + + KR+ R+   L  DPP   S  P+ +N+  W A I GP  TP++GG F L + F  DYP KPP + F +R++H N+   G + ++IL++ WSP   +  +L +I+S+   P P SPA    ARL+  ++ +++   +E
Sbjct:   32 TSVSASGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDREKHDEVAKE 175          
The following BLAST results are available for this feature:
BLAST of EY675044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UBC_ASFB71.827e-2436.60Ubiquitin-conjugating enzyme E2 OS=African swine f... [more]
UBC_ASFP42.387e-2435.95Ubiquitin-conjugating enzyme E2 OS=African swine f... [more]
UBC21_ARATH5.317e-2439.13Probable ubiquitin carrier protein E2 21 OS=Arabid... [more]
UBC_ASFM26.944e-2435.95Ubiquitin-conjugating enzyme E2 OS=African swine f... [more]
UBC_ASFWA1.184e-2335.95Ubiquitin-conjugating enzyme E2 OS=African swine f... [more]
UBC9_CAEEL1.547e-2335.33SUMO-conjugating enzyme UBC9 OS=Caenorhabditis ele... [more]
UB2R2_RABIT2.020e-2335.06Ubiquitin-conjugating enzyme E2 R2 OS=Oryctolagus ... [more]
UB2R2_MOUSE2.020e-2335.06Ubiquitin-conjugating enzyme E2 R2 OS=Mus musculus... [more]
UB2R2_HUMAN2.020e-2335.06Ubiquitin-conjugating enzyme E2 R2 OS=Homo sapiens... [more]
COP10_ARATH2.020e-2335.42Constitutive photomorphogenesis protein 10 OS=Arab... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-C03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675044 ID=EY675044; Name=EY675044; organism=Citrus sinensis; type=EST; length=1005bp
TTCTTTCTCTAGAAGCTTCTCCTCTCATTCTCCCCCCTTACCCCCTCTGC
AAAAGCCGCTTCTCAGTTTTGCTCTCTAAAACGCCACTATGTCAACACCG
GCGAAGAAGCGGCTGATGCGGGACTTCAAGCGCCTCCAGCAAGATCCACC
CGCCGGAATCAGCGGGGCCCCTCAAGACAACAACATCATGTTATGGAACG
CCGTTATTTTTGGGCCTGATGATACTCCCTGGGACGGAGGTACGTTCAAG
TTGACTCTTCAGTTTACAGAGGATTATCCGAATAAACCTCCAACAGTTCG
GTTCGTTTCACGGATGTTTCATCCAAATATCTATGCGGATGGAAGTATCT
GCCTGGATATATTACAAAATCAGTGGAGTCCTATATATGATGTTGCAGCT
ATACTGACCTCCATCCAGTCGCTGCTTTGTGATCCAAATCCAAACTCCCC
TGCAAATTCTGAAGCAGCTCGGCTGTTTAGTGAGAATAAACGAGAGTACA
ACCGAAGAGTGCGTGAAATAGTGGAGCAAAGCTGGACAGCCGAATAAAAG
TCCAATGAAAGCACCGGCCGGTTATGCTGTAAAAATAAAAGATGAAACCT
GGGGGGCTGGGTGTGGCTGGGTTTGTTCAATAATAATGTAACCCCGAAAC
CAATCGGATTTTCAGGGGGTTTGGGTTATTAAAAAATCCCTCCGAATTTT
TTCCCCCCAAAAAGCTCTGGGGTGAACCCCCTGGGTAAATTTCCTCAAAA
TTTCCCCTTTCTTTTTCACCTCCTTTTCAGGGAACTTGGTAATTTTATCC
GGGACCTTTTTGGAAAGGGGGGTATTTTTGGCGGGCGGGGAAAACAGGGG
GATGGTGTTCTTTAAAAAACACAACCCCCAAGAAGAGAACCTCTTTTTTT
TTTTTTGGGGAAATTTTTTTTTTTACCGGGAATTTTTTTGGGGGGGGGTG
TTGGGGGAAGGGGGGCCGCCAAAAAAAATAAAAAAACAAAAAAAAAAAAT
AAAGA
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