EY675044

Overview
NameEY675044
Unique NameEY675044
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1005
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC14_SCHPO (Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccharomyces pombe GN=ubc14 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.891e-21
Identity = 49/150 (32.67%), Postives = 87/150 (58.00%), Query Frame = 2
Query:   83 ATMSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ-WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQ 529
            A+ S  + +RL +++  L++ P   I     D+N+  W     GP D+ + GG F  +L+F  DYP +PPT+ F +R++HPN  ++G++CL IL+ Q + P   + ++L  I  LL +PNP+ P  +  A  +  ++  +++  R+ VEQ
Sbjct:    2 ASASPSSSRRLTKEYSDLREHPIPDIRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVASIAEQYRNDRPSFDKIARDYVEQ 151          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBE2T_HUMAN (Ubiquitin-conjugating enzyme E2 T OS=Homo sapiens GN=UBE2T PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.470e-21
Identity = 54/154 (35.06%), Postives = 88/154 (57.14%), Query Frame = 2
Query:  110 RLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL----QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTAE*KSNE 559
            RL R+   L  +PP GI+     + +    A I G  +TP++ G FKL +   E YP +PP +RF++ ++HPNI + G ICLD+L    +  W P  ++A +LTSIQ L+ +PNP+ P  ++ +  F  NK  + +  R+  E+    + K++E
Sbjct:    6 RLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHARQKQKADE 159          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC8_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC8 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 3.226e-21
Identity = 47/125 (37.60%), Postives = 83/125 (66.40%), Query Frame = 2
Query:  176 DNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILT-SIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTAE 544
            ++++  ++    GP DTP++ G ++L ++  ++YP K P++ FV+++FHPNI  A GSICLD++ + WSP+YD+  I+   I  LL +PN + P N+EAA L   +K+ Y  +++E +++  T E
Sbjct:   26 NDSMQEFHVKFLGPKDTPYENGVWRLHVELPDNYPYKSPSIGFVNKIFHPNIDIASGSICLDVINSTWSPLYDLINIVEWMIPGLLKEPNGSDPLNNEAATLQLRDKKLYEEKIKEYIDKYATKE 150          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBE2S_BRAFL (Ubiquitin-conjugating enzyme E2 S OS=Branchiostoma floridae GN=BRAFLDRAFT_259979 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.213e-21
Identity = 49/140 (35.00%), Postives = 77/140 (55.00%), Query Frame = 2
Query:  107 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVE 526
            +++ ++   L   PP G+   P + +I    A I GP  TP++GG FK+ L   +D+P  PP   F++++FHPN+  +G IC++ L+  W     +  IL +I+ LL  PNP S  N EA +L  E    Y+ R R + E
Sbjct:   16 RQVAKEVLDLANHPPEGVKVFPNEQDITDVQATIEGPGGTPYEGGQFKIKLSLGKDFPQTPPKGFFLTKIFHPNVAKNGEICVNTLKKDWKADLGLKHILLTIKCLLIYPNPESALNEEAGKLLLEQYDNYSERARMMTE 155          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBE2T_BOVIN (Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN=UBE2T PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.502e-21
Identity = 51/144 (35.42%), Postives = 82/144 (56.94%), Query Frame = 2
Query:  110 RLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL----QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQ 529
            RL R+   L  +PP GI+     + +    A I G  +TP++ G FKL +   E YP +PP +RF++ ++HPNI + G ICLD+L    +  W P  ++A +LT IQ L+ +PNP+ P  ++ +  F  NK  + +  R+  E+
Sbjct:    6 RLKRELSLLAAEPPPGITCWQDGDRMEDLRAQILGGANTPYEKGVFKLEVHIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATLLTCIQQLMAEPNPDDPLMADISSEFKYNKPVFFKNARQWTEK 149          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UE2NL_HUMAN (Putative ubiquitin-conjugating enzyme E2 N-like OS=Homo sapiens GN=UBE2NL PE=5 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 7.186e-21
Identity = 48/130 (36.92%), Postives = 80/130 (61.54%), Query Frame = 2
Query:  110 RLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPD-DTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKRE 496
            R++++ +RL  +P  GI   P ++N   ++ VI G   D+P++GGTFK  L   E+YP   P VRF+++++HPN+     I LDIL+++WSP   +  +L SIQ+LL  PNP+ P  ++    +  N+ +
Sbjct:    7 RIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGESKDSPFEGGTFKRELLLAEEYPMAAPKVRFMTKIYHPNVDKLERISLDILKDKWSPALQIRTVLLSIQALLNAPNPDDPLANDVVEQWKTNEAQ 136          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBE2T_XENLA (Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevis GN=ube2t PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 7.186e-21
Identity = 53/147 (36.05%), Postives = 85/147 (57.82%), Query Frame = 2
Query:  110 RLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL----QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 538
            RL R+ + L ++PP G+     ++N+    A I G   +P++GG F L +   E YP +PP +RF++ ++HPNI + G ICLDIL    +  W P  +++ +LTSIQ L+ +PNP+ P  ++ +  F     +YNR V     + WT
Sbjct:    6 RLKRELQLLNKEPPPGVICWQNESNMDDLRAQIIGGSGSPYEGGIFNLEIIVPERYPFEPPKIRFLTPIYHPNIDSAGRICLDILKLPPKGAWRPALNISTVLTSIQLLMSEPNPDDPLMADISSEF-----KYNRAVFFSNAKKWT 147          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBE2T_MOUSE (Ubiquitin-conjugating enzyme E2 T OS=Mus musculus GN=Ube2t PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 7.186e-21
Identity = 53/154 (34.42%), Postives = 88/154 (57.14%), Query Frame = 2
Query:  110 RLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL----QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTAE*KSNE 559
            RL ++   L  +PP GI+   + + +    A I G  +TP++ G F L +   E YP +PP VRF++ ++HPNI + G ICLDIL    +  W P  ++A +LTSIQ L+ +PNP+ P  ++ +  F  NK  + ++ ++  E     + K++E
Sbjct:    6 RLKKELHMLAIEPPPGITCWQEKDQVADLRAQILGGANTPYEKGVFTLEVIIPERYPFEPPQVRFLTPIYHPNIDSSGRICLDILKLPPKGAWRPSLNIATVLTSIQLLMAEPNPDDPLMADISSEFKYNKIAFLKKAKQWTEAHARQKQKADE 159          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBE2S_DANRE (Ubiquitin-conjugating enzyme E2 S OS=Danio rerio GN=ube2s PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 7.186e-21
Identity = 48/136 (35.29%), Postives = 76/136 (55.88%), Query Frame = 2
Query:  119 RDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVE 526
            ++   L  DPP GI   P + +I   +  I GP+ TP+ GG F++ L   +D+P  PP   F++++FHPN+   G IC+++L+  W     +  +L +I+ LL  PNP S  N EA +L  E+ +EY  R   + E
Sbjct:   18 KEVSALAADPPEGIKIYPSEEDITELHTSIEGPEGTPYAGGVFRMRLVLGKDFPAVPPRGYFLTKIFHPNVGHKGEICVNVLKRDWKAELGLRHVLLTIKCLLIHPNPESALNEEAGKLLLEDYKEYASRAHLLTE 153          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBE2S_DICDI (Ubiquitin-conjugating enzyme E2 S OS=Dictyostelium discoideum GN=ube2s PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.226e-20
Identity = 48/136 (35.29%), Postives = 77/136 (56.62%), Query Frame = 2
Query:  107 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVR 514
            KR++++ K L      GI+  P + +I    AV+ GP  TP++GG FK  L  + D+P  PP   F++++FHPN+   G IC++ L+  W+    +  IL +I+ LL  PN  S  N +A+RL  EN  +Y +  +
Sbjct:   12 KRVVKELKELNSSTLEGITLLPCEEDITNIEAVVTGPAGTPYEGGYFKARLILSSDFPRSPPKANFITKIFHPNVSKKGEICVNTLKKDWTEDLGLKHILLTIKCLLIVPNAESSLNEDASRLLLENYDDYCKHAK 147          
The following BLAST results are available for this feature:
BLAST of EY675044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UBC14_SCHPO1.891e-2132.67Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccha... [more]
UBE2T_HUMAN2.470e-2135.06Ubiquitin-conjugating enzyme E2 T OS=Homo sapiens ... [more]
UBC8_YEAST3.226e-2137.60Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharo... [more]
UBE2S_BRAFL4.213e-2135.00Ubiquitin-conjugating enzyme E2 S OS=Branchiostoma... [more]
UBE2T_BOVIN5.502e-2135.42Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN... [more]
UE2NL_HUMAN7.186e-2136.92Putative ubiquitin-conjugating enzyme E2 N-like OS... [more]
UBE2T_XENLA7.186e-2136.05Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevi... [more]
UBE2T_MOUSE7.186e-2134.42Ubiquitin-conjugating enzyme E2 T OS=Mus musculus ... [more]
UBE2S_DANRE7.186e-2135.29Ubiquitin-conjugating enzyme E2 S OS=Danio rerio G... [more]
UBE2S_DICDI1.226e-2035.29Ubiquitin-conjugating enzyme E2 S OS=Dictyostelium... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-C03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675044 ID=EY675044; Name=EY675044; organism=Citrus sinensis; type=EST; length=1005bp
TTCTTTCTCTAGAAGCTTCTCCTCTCATTCTCCCCCCTTACCCCCTCTGC
AAAAGCCGCTTCTCAGTTTTGCTCTCTAAAACGCCACTATGTCAACACCG
GCGAAGAAGCGGCTGATGCGGGACTTCAAGCGCCTCCAGCAAGATCCACC
CGCCGGAATCAGCGGGGCCCCTCAAGACAACAACATCATGTTATGGAACG
CCGTTATTTTTGGGCCTGATGATACTCCCTGGGACGGAGGTACGTTCAAG
TTGACTCTTCAGTTTACAGAGGATTATCCGAATAAACCTCCAACAGTTCG
GTTCGTTTCACGGATGTTTCATCCAAATATCTATGCGGATGGAAGTATCT
GCCTGGATATATTACAAAATCAGTGGAGTCCTATATATGATGTTGCAGCT
ATACTGACCTCCATCCAGTCGCTGCTTTGTGATCCAAATCCAAACTCCCC
TGCAAATTCTGAAGCAGCTCGGCTGTTTAGTGAGAATAAACGAGAGTACA
ACCGAAGAGTGCGTGAAATAGTGGAGCAAAGCTGGACAGCCGAATAAAAG
TCCAATGAAAGCACCGGCCGGTTATGCTGTAAAAATAAAAGATGAAACCT
GGGGGGCTGGGTGTGGCTGGGTTTGTTCAATAATAATGTAACCCCGAAAC
CAATCGGATTTTCAGGGGGTTTGGGTTATTAAAAAATCCCTCCGAATTTT
TTCCCCCCAAAAAGCTCTGGGGTGAACCCCCTGGGTAAATTTCCTCAAAA
TTTCCCCTTTCTTTTTCACCTCCTTTTCAGGGAACTTGGTAATTTTATCC
GGGACCTTTTTGGAAAGGGGGGTATTTTTGGCGGGCGGGGAAAACAGGGG
GATGGTGTTCTTTAAAAAACACAACCCCCAAGAAGAGAACCTCTTTTTTT
TTTTTTGGGGAAATTTTTTTTTTTACCGGGAATTTTTTTGGGGGGGGGTG
TTGGGGGAAGGGGGGCCGCCAAAAAAAATAAAAAAACAAAAAAAAAAAAT
AAAGA
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