EY675044

Overview
NameEY675044
Unique NameEY675044
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1005
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=2 SV=3)

HSP 1 Score: 96.2857 bits (238), Expect = 3.019e-19
Identity = 49/146 (33.56%), Postives = 82/146 (56.16%), Query Frame = 2
Query:   89 MSTPAKKRLMRDFKRLQQDPPAG---ISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVR 514
            M+  A +R+ R+FK + +        I     D N       I GP DTP++GG ++L ++  E YP  PP VRF+++++HPNI +  G+ICLDIL++QW+    +  +L S+Q+LL    P+ P ++  A  + +N   + +  R
Sbjct:    1 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTAR 146          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3)

HSP 1 Score: 96.2857 bits (238), Expect = 3.019e-19
Identity = 49/146 (33.56%), Postives = 82/146 (56.16%), Query Frame = 2
Query:   89 MSTPAKKRLMRDFKRLQQDPPAG---ISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVR 514
            M+  A +R+ R+FK + +        I     D N       I GP DTP++GG ++L ++  E YP  PP VRF+++++HPNI +  G+ICLDIL++QW+    +  +L S+Q+LL    P+ P ++  A  + +N   + +  R
Sbjct:    1 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTAR 146          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3)

HSP 1 Score: 96.2857 bits (238), Expect = 3.019e-19
Identity = 49/146 (33.56%), Postives = 82/146 (56.16%), Query Frame = 2
Query:   89 MSTPAKKRLMRDFKRLQQDPPAG---ISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVR 514
            M+  A +R+ R+FK + +        I     D N       I GP DTP++GG ++L ++  E YP  PP VRF+++++HPNI +  G+ICLDIL++QW+    +  +L S+Q+LL    P+ P ++  A  + +N   + +  R
Sbjct:    1 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTAR 146          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC12_DROME (NEDD8-conjugating enzyme Ubc12 OS=Drosophila melanogaster GN=CG7375 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 3.019e-19
Identity = 44/151 (29.14%), Postives = 85/151 (56.29%), Query Frame = 2
Query:   92 STPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTAE 544
            ++ A+ R+ +D   L   P    +  P  N+++ +  +I  PD+  +  G F    +   +YP++PP V+  ++++HPNI  DG++CL+IL+  W+P+ ++ +I+  +Q L  +PNP  P N EAA +   N+R++   V++ +      E
Sbjct:   24 ASAAQLRIQKDINELNL-PNTCATDFPDPNDLLNFKLII-SPDEGFYRDGRFVFNFRVGSNYPHEPPKVKCATQVYHPNIDLDGNVCLNILREDWNPVLNINSIVYGLQFLFLEPNPEDPLNKEAADVLQTNRRQFENNVKKAMRGGCVGE 172          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC12_DICDI (NEDD8-conjugating enzyme Ubc12 OS=Dictyostelium discoideum GN=ube2m PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.784e-19
Identity = 43/142 (30.28%), Postives = 78/142 (54.93%), Query Frame = 2
Query:   92 STPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 517
            + PA+ R  +D   ++   P G + + +D N +L   +   P D  +   TF+ T+     YP  PP V   + ++HPNI  +G +CL+IL+  W P+ ++  ++  + +L  +PNP+ P N +AA+L  +NK+ +   VR+
Sbjct:   75 ANPAELRAQKDIDEMEV--PTGCAVSFKDTNDILNFNLSITPTDGLYQSATFQFTINIPSTYPYDPPKVHCDTLVYHPNIDLEGHVCLNILRQDWMPVLNIGTVIFGLMTLFLEPNPDDPLNKDAAQLMIDNKKTFEANVRQ 214          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC16_SCHPO (Ubiquitin-conjugating enzyme E2 16 OS=Schizosaccharomyces pombe GN=ubc16 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.957e-18
Identity = 51/140 (36.43%), Postives = 83/140 (59.29%), Query Frame = 2
Query:  107 KRLMRDFKRLQQDPPAGIS--GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLF-SENKREYNRRVR 514
            KRL +++   Q    +G+       D ++  W AVI GP +TP++GG + L +   E YP  PP+V F +++ HPNI + +G +C+DIL+  WSP + + +   +I SLL + + +SP N +AA+L  + +K  YN  VR
Sbjct:    6 KRLHKEYASFQAGDISGLLLLKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSLQSACLAIISLLSNYDASSPLNVDAAKLLRTGDKTAYNSLVR 145          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: Y1A1_ENCCU (Probable ubiquitin-conjugating enzyme E2 ECU01_1010 OS=Encephalitozoon cuniculi GN=ECU01_1010 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.556e-18
Identity = 44/136 (32.35%), Postives = 77/136 (56.62%), Query Frame = 2
Query:  164 GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQ 529
            G+ ++ +  +W+       D+ + G   K  ++F   YP +PPT++FVS+MFHPNIY DG +C+ IL+              ++W+P+ ++  I+ SI  +L  PN +SPAN +A+ ++ +N  EY + V  I  +
Sbjct:   58 GSMENRDYKVWDIYFTLGGDSLYAGRILKAVMKFPSSYPLRPPTLKFVSKMFHPNIYEDGKMCISILEEDKQQDSSVFGDPKDKWTPVQNIRTIVMSIVVILNSPNISSPANVDASVMYRDNPEEYIKEVIRIARE 193          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBE2U_MACFA (Ubiquitin-conjugating enzyme E2 U OS=Macaca fascicularis GN=UBE2U PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.556e-18
Identity = 48/132 (36.36%), Postives = 78/132 (59.09%), Query Frame = 2
Query:  113 LMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQN--QWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREY 499
            L RDF  L+++   GI+  P   ++M W   I G  ++ W G  F+LT+ FT +Y   PP V+FV+  FHPN+    G  C+D L N  +W+  Y +++IL ++Q +L +P   +P N EAAR+ ++++  Y
Sbjct:    9 LQRDFYDLKENNYKGITARPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFVTIPFHPNVDPHTGQPCIDFLDNPKKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILTKDESLY 140          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC21_CAEEL (Probable ubiquitin-conjugating enzyme E2 21 OS=Caenorhabditis elegans GN=ubc-21 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 4.359e-18
Identity = 53/152 (34.87%), Postives = 83/152 (54.61%), Query Frame = 2
Query:   89 MSTPAKKRLMRDFKRLQQDPP---AGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTV---------------RFVSRMFHPNIYAD-GSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSEN 487
            MS  A  R+ R  K +        AGI    ++NN+M     I GP+ TP+ GGTF++ +   E YP +PP V               +FV+R++HPNI +  G+ICLDIL+++W+    +  +L S+Q++LC P P+ P ++  A+ F  N
Sbjct:   15 MSNLALARVTRKCKEVANASDITEAGIHVEIKENNLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASLTLRTVLLSLQAMLCSPEPSDPQDAVVAKQFINN 166          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC12_YARLI (NEDD8-conjugating enzyme UBC12 OS=Yarrowia lipolytica GN=UBC12 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.694e-18
Identity = 42/140 (30.00%), Postives = 79/140 (56.43%), Query Frame = 2
Query:   95 TPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVR 514
            T A+ R+ +D   L   P    +  P   +IM +   +  PD+  + GG F+ +     ++P++PP V+ + +++HPNI  +G++CL+IL+  W P+  + A++  +Q L  +PN + P N +AA   + N+ E+ R V+
Sbjct:   23 TAAQLRVQKDLSELSL-PSTMKTHFPSAEDIMNFELTV-RPDEGFYQGGEFRFSFYVNPNFPHEPPKVKCLQKVYHPNIDLEGNVCLNILREDWKPVLSLNAVMIGLQYLFLEPNASDPLNKDAAHQMTANREEFKRNVK 160          
The following BLAST results are available for this feature:
BLAST of EY675044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UBE2K_MOUSE3.019e-1933.56Ubiquitin-conjugating enzyme E2 K OS=Mus musculus ... [more]
UBE2K_HUMAN3.019e-1933.56Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens ... [more]
UBE2K_BOVIN3.019e-1933.56Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN... [more]
UBC12_DROME3.019e-1929.14NEDD8-conjugating enzyme Ubc12 OS=Drosophila melan... [more]
UBC12_DICDI8.784e-1930.28NEDD8-conjugating enzyme Ubc12 OS=Dictyostelium di... [more]
UBC16_SCHPO1.957e-1836.43Ubiquitin-conjugating enzyme E2 16 OS=Schizosaccha... [more]
Y1A1_ENCCU2.556e-1832.35Probable ubiquitin-conjugating enzyme E2 ECU01_101... [more]
UBE2U_MACFA2.556e-1836.36Ubiquitin-conjugating enzyme E2 U OS=Macaca fascic... [more]
UBC21_CAEEL4.359e-1834.87Probable ubiquitin-conjugating enzyme E2 21 OS=Cae... [more]
UBC12_YARLI5.694e-1830.00NEDD8-conjugating enzyme UBC12 OS=Yarrowia lipolyt... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-C03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675044 ID=EY675044; Name=EY675044; organism=Citrus sinensis; type=EST; length=1005bp
TTCTTTCTCTAGAAGCTTCTCCTCTCATTCTCCCCCCTTACCCCCTCTGC
AAAAGCCGCTTCTCAGTTTTGCTCTCTAAAACGCCACTATGTCAACACCG
GCGAAGAAGCGGCTGATGCGGGACTTCAAGCGCCTCCAGCAAGATCCACC
CGCCGGAATCAGCGGGGCCCCTCAAGACAACAACATCATGTTATGGAACG
CCGTTATTTTTGGGCCTGATGATACTCCCTGGGACGGAGGTACGTTCAAG
TTGACTCTTCAGTTTACAGAGGATTATCCGAATAAACCTCCAACAGTTCG
GTTCGTTTCACGGATGTTTCATCCAAATATCTATGCGGATGGAAGTATCT
GCCTGGATATATTACAAAATCAGTGGAGTCCTATATATGATGTTGCAGCT
ATACTGACCTCCATCCAGTCGCTGCTTTGTGATCCAAATCCAAACTCCCC
TGCAAATTCTGAAGCAGCTCGGCTGTTTAGTGAGAATAAACGAGAGTACA
ACCGAAGAGTGCGTGAAATAGTGGAGCAAAGCTGGACAGCCGAATAAAAG
TCCAATGAAAGCACCGGCCGGTTATGCTGTAAAAATAAAAGATGAAACCT
GGGGGGCTGGGTGTGGCTGGGTTTGTTCAATAATAATGTAACCCCGAAAC
CAATCGGATTTTCAGGGGGTTTGGGTTATTAAAAAATCCCTCCGAATTTT
TTCCCCCCAAAAAGCTCTGGGGTGAACCCCCTGGGTAAATTTCCTCAAAA
TTTCCCCTTTCTTTTTCACCTCCTTTTCAGGGAACTTGGTAATTTTATCC
GGGACCTTTTTGGAAAGGGGGGTATTTTTGGCGGGCGGGGAAAACAGGGG
GATGGTGTTCTTTAAAAAACACAACCCCCAAGAAGAGAACCTCTTTTTTT
TTTTTTGGGGAAATTTTTTTTTTTACCGGGAATTTTTTTGGGGGGGGGTG
TTGGGGGAAGGGGGGCCGCCAAAAAAAATAAAAAAACAAAAAAAAAAAAT
AAAGA
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