EY675044
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC12_SCHPO (NEDD8-conjugating enzyme ubc12 OS=Schizosaccharomyces pombe GN=ubc12 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 7.436e-18 Identity = 47/145 (32.41%), Postives = 85/145 (58.62%), Query Frame = 2 Query: 80 NATMSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVR 514 NA+ +PA+ R+ +D L+ P+ +S + D + + PD+ + GG FK +Q ++YP+ PP V+ +++++HPNI +G++CL+IL+ W+P+ ++ +IL +Q L PN P N EAA ++ + + RVR Sbjct: 17 NASGISPAQIRIQKDVTDLEI--PSTMSTSWPDPIKLNVLHLEIRPDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWNPVLNLNSILVGLQFLFLSPNAEDPLNKEAAADLHKDPQGFASRVR 159
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBE2U_HUMAN (Ubiquitin-conjugating enzyme E2 U OS=Homo sapiens GN=UBE2U PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 9.712e-18 Identity = 48/137 (35.04%), Postives = 79/137 (57.66%), Query Frame = 2 Query: 113 LMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQN--QWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVR 514 L RDF L+++ GI+ P ++M W I G ++ W G F+LT+ FT +Y PP V+F++ FHPN+ G C+D L N +W+ Y +++IL ++Q +L +P +P N EAAR+ +++ Y +R Sbjct: 9 LHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTILR 145
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC12_XENTR (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.268e-17 Identity = 42/141 (29.79%), Postives = 78/141 (55.32%), Query Frame = 2 Query: 92 STPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVR 514 ++ A+ R+ +D L I + D+ +L ++ PD+ + GG F + + + YP+ PP V+ + ++HPNI +G++CL+IL+ W P+ + +I+ +Q L +PNP P N EAA + N+R + + V+ Sbjct: 27 ASAAQLRIQKDINELNLPKTCEIEFSDHDD--LLNFKLVICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQ 165
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UB2L6_MOUSE (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Mus musculus GN=Ube2l6 PE=2 SV=3) HSP 1 Score: 90.8929 bits (224), Expect = 1.268e-17 Identity = 42/141 (29.79%), Postives = 79/141 (56.03%), Query Frame = 2 Query: 101 AKKRLMRDFKRLQQD-PPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ-WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 517 A KR+ ++ + L ++ PP + D N+++W+ ++ PD P+ F++ + F +YP KPPT+RF ++++HPN+ DG +CL ++ N+ W P +L ++ L+ PN P E A L ++N + ++ E Sbjct: 3 ASKRVAKELESLSKELPPYLRQLSSDDANVLVWHMLLL-PDQLPYGLKAFQVRIDFPREYPFKPPTLRFTTKIYHPNVREDGLVCLPLISNENWKPYTKPYQVLEALNVLVSKPNLEEPVRLELADLLTQNPEMFRKKAEE 142
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC1_MIMIV (Probable ubiquitin-conjugating enzyme E2 L460 OS=Acanthamoeba polyphaga mimivirus GN=UBC PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.657e-17 Identity = 42/115 (36.52%), Postives = 70/115 (60.87%), Query Frame = 2 Query: 176 DNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ-WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 517 D NI LW I GP+++ ++ F+L ++ + DYP P V+F++ + H N+ G ICL+IL+ W+ ++ +I+ SI LL PNP P NSE A L+ +K Y++++R+ Sbjct: 33 DENIFLWKVNIKGPENSLYENYNFELEIELSNDYPYSSPKVKFITPIQHMNVNDKGDICLNILKKDGWNASLNIISIIWSIIVLLDQPNPEDPFNSELASLYRNDKLSYDKKIRD 147
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC12_XENLA (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.657e-17 Identity = 42/141 (29.79%), Postives = 78/141 (55.32%), Query Frame = 2 Query: 92 STPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVR 514 ++ A+ R+ +D L I + D+ +L ++ PD+ + GG F + + + YP+ PP V+ + ++HPNI +G++CL+IL+ W P+ + +I+ +Q L +PNP P N EAA + N+R + + V+ Sbjct: 27 ASAAQLRIQKDITELNLPKTCEIEFSDHDD--LLNFKLVICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQ 165
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC12_MOUSE (NEDD8-conjugating enzyme Ubc12 OS=Mus musculus GN=Ube2m PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.164e-17 Identity = 42/141 (29.79%), Postives = 78/141 (55.32%), Query Frame = 2 Query: 92 STPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVR 514 ++ A+ R+ +D L IS + D+ +L ++ PD+ + G F + + + YP+ PP V+ + ++HPNI +G++CL+IL+ W P+ + +I+ +Q L +PNP P N EAA + N+R + + V+ Sbjct: 27 ASAAQLRIQKDINELNLPKTCDISFSDPDD--LLNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQ 165
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC12_HUMAN (NEDD8-conjugating enzyme Ubc12 OS=Homo sapiens GN=UBE2M PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.164e-17 Identity = 42/141 (29.79%), Postives = 78/141 (55.32%), Query Frame = 2 Query: 92 STPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVR 514 ++ A+ R+ +D L IS + D+ +L ++ PD+ + G F + + + YP+ PP V+ + ++HPNI +G++CL+IL+ W P+ + +I+ +Q L +PNP P N EAA + N+R + + V+ Sbjct: 27 ASAAQLRIQKDINELNLPKTCDISFSDPDD--LLNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQ 165
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC12_BOVIN (NEDD8-conjugating enzyme Ubc12 OS=Bos taurus GN=UBE2M PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.164e-17 Identity = 42/141 (29.79%), Postives = 78/141 (55.32%), Query Frame = 2 Query: 92 STPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVR 514 ++ A+ R+ +D L IS + D+ +L ++ PD+ + G F + + + YP+ PP V+ + ++HPNI +G++CL+IL+ W P+ + +I+ +Q L +PNP P N EAA + N+R + + V+ Sbjct: 27 ASAAQLRIQKDINELNLPKTCDISFSDPDD--LLNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQ 165
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC8_SCHPO (Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe GN=ubc8 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.826e-17 Identity = 43/118 (36.44%), Postives = 69/118 (58.47%), Query Frame = 2 Query: 176 DNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIV 523 ++N+ + GP +TP+ GG +K+ ++ +YP K P++ FV+R+FHPNI GS+CLD++ WSP++D+ I + LL PN + P N EAA L Y +VR+ + Sbjct: 26 NDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPLNGEAAALLLREPNTYYAKVRDYI 143 The following BLAST results are available for this feature:
BLAST of EY675044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 253
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675044 ID=EY675044; Name=EY675044; organism=Citrus sinensis; type=EST; length=1005bpback to top |