EY675044

Overview
NameEY675044
Unique NameEY675044
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1005
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC6_DEBHA (Ubiquitin-conjugating enzyme E2 6 OS=Debaryomyces hansenii GN=UBC6 PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.475e-13
Identity = 40/117 (34.19%), Postives = 66/117 (56.41%), Query Frame = 2
Query:   92 STPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN--IYADGSICL---DILQNQWSPIYDVAAILTSIQSLL 427
            S  ++KRL +++K +  +PP  +S  P D NI+ W+ VI GP  TP++ G +   L+F  +YP KPP++  ++    PN     +  +CL   D   + W+P + VA ILT + S +
Sbjct:    3 SRQSQKRLTKEYKAITLNPPPYVSAKPNDENILEWHYVITGPPHTPFEEGQYHGILRFPSEYPFKPPSISMIT----PNGRFACNTRLCLSMSDYHPDTWNPAWSVATILTGLLSFM 115          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC84_DROME (Ubiquitin-conjugating enzyme E2-18 kDa OS=Drosophila melanogaster GN=Ubc84D PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 4.223e-13
Identity = 34/146 (23.29%), Postives = 75/146 (51.37%), Query Frame = 2
Query:  101 AKKRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQS 532
            A +RL R+   L +   + +      D ++++W  ++  P+  P++ G F++ + F   YP  PP + F ++++HPN+   G +CL I+  + W P      +L ++ +++ +P P  P  S+ A  F    +++ +   E  +++
Sbjct:    3 ATRRLTRELSDLVEAKMSTLRNIESSDESLLMWTGLLV-PEKAPYNKGAFRIEINFPPQYPFMPPKILFKTKIYHPNVDEKGEVCLPIISTDNWKPTTRTEQVLQALVAIVHNPEPEHPLRSDLAEEFVREHKKFMKTAEEFTKKN 147          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC18_ARATH (Probable ubiquitin carrier protein E2 18 OS=Arabidopsis thaliana GN=UBC18 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.515e-13
Identity = 43/127 (33.86%), Postives = 66/127 (51.97%), Query Frame = 2
Query:   89 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRM-FHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLL-CDPNPNSPANSE 463
            +S  A  RL ++    Q +PP G      DN +  W   + G   T +   T+ L ++F + YP + P V FV     HP+IY++G ICLDIL + WSP   V+++  SI S+L   P    P +++
Sbjct:   12 LSKIACNRLQKELSEWQVNPPTGFKHRVTDN-LQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSPEKQRPTDND 137          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC17_ARATH (Probable ubiquitin carrier protein E2 17 OS=Arabidopsis thaliana GN=UBC17 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.203e-13
Identity = 40/110 (36.36%), Postives = 61/110 (55.45%), Query Frame = 2
Query:  101 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRM-FHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLL 427
            A  RL ++F   Q +PP+G      DN +  W   + G   T +   T++L ++F E YP + P V F      HP+IY++G ICLD+L + WSP   +++I  SI S+L
Sbjct:   16 ATNRLQKEFMEWQTNPPSGFKHRVSDN-LQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSILSML 124          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UB2J2_MOUSE (Ubiquitin-conjugating enzyme E2 J2 OS=Mus musculus GN=Ube2j2 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.203e-13
Identity = 40/126 (31.75%), Postives = 69/126 (54.76%), Query Frame = 2
Query:   80 NATMSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN--IYADGSICLDILQ---NQWSPIYDVAAILTSIQSLLCDPNP 442
            N    T A +RL +D+ R+++DP   I   P  +NI+ W+ V+ GP+ TP++GG +   L F  ++P KPP++  ++    PN     +  +CL I     + W+P + V+ ILT + S + +  P
Sbjct:    6 NKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UB2J2_HUMAN (Ubiquitin-conjugating enzyme E2 J2 OS=Homo sapiens GN=UBE2J2 PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 1.229e-12
Identity = 39/121 (32.23%), Postives = 68/121 (56.20%), Query Frame = 2
Query:   95 TPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN--IYADGSICLDILQ---NQWSPIYDVAAILTSIQSLLCDPNP 442
            T A +RL +D+ R+++DP   I   P  +NI+ W+ V+ GP+ TP++GG +   L F  ++P KPP++  ++    PN     +  +CL I     + W+P + V+ ILT + S + +  P
Sbjct:   11 TTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UB2J2_BOVIN (Ubiquitin-conjugating enzyme E2 J2 OS=Bos taurus GN=UBE2J2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.229e-12
Identity = 39/121 (32.23%), Postives = 68/121 (56.20%), Query Frame = 2
Query:   95 TPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN--IYADGSICLDILQ---NQWSPIYDVAAILTSIQSLLCDPNP 442
            T A +RL +D+ R+++DP   I   P  +NI+ W+ V+ GP+ TP++GG +   L F  ++P KPP++  ++    PN     +  +CL I     + W+P + V+ ILT + S + +  P
Sbjct:   11 TTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC12_CAEEL (NEDD8-conjugating enzyme ubc-12 OS=Caenorhabditis elegans GN=ubc-12 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.096e-12
Identity = 38/112 (33.93%), Postives = 64/112 (57.14%), Query Frame = 2
Query:  215 PDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL------QNQWSPIYDVAAILTSIQSLLCD-PNPNSPANSEAARLFSENKREYNRRVREIVEQ 529
            P +  + GG F+  +    +Y N PP V+ +++++HPNI  DGSICL IL      Q  W P  ++  ++  + SL  D  + N   N +AA+++S+N+  +N RVRE + +
Sbjct:   67 PQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGWRPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREYISR 178          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBE2W_DICDI (Probable ubiquitin-conjugating enzyme E2 W OS=Dictyostelium discoideum GN=ube2w PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.575e-12
Identity = 40/114 (35.09%), Postives = 64/114 (56.14%), Query Frame = 2
Query:   89 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRM-FHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLL 427
            M++   KRL ++   L+ +PP  IS   + +N+  W   + G + + + G  FKL  +F+  YP   P V F+     HP+IY++G ICL IL + WSP   V+++  SI S+L
Sbjct:    1 MTSRYAKRLQKELLDLKTNPPPCIS-ITEGDNLDKWVIAVDGTEGSIYQGEHFKLQFKFSSGYPLDSPEVIFIGTPPIHPHIYSNGHICLSILYDNWSPALTVSSVCLSILSML 113          
BLAST of EY675044 vs. ExPASy Swiss-Prot
Match: UBC33_ARATH (Probable ubiquitin carrier protein E2 33 OS=Arabidopsis thaliana GN=UBC33 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.774e-11
Identity = 41/134 (30.60%), Postives = 69/134 (51.49%), Query Frame = 2
Query:  107 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN--IYADGSICL---DILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKR 493
            KRL ++++ L ++P + +   P  N+I+ W+ V+ G + TP+ GG +   ++F  +YP KPP +     M  PN        ICL   D     W+P++ V++ILT + S + D   NSP         +E +R
Sbjct:    8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGI----TMTTPNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMD---NSPTTGSVNTSVAEKQR 134          
The following BLAST results are available for this feature:
BLAST of EY675044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UBC6_DEBHA2.475e-1334.19Ubiquitin-conjugating enzyme E2 6 OS=Debaryomyces ... [more]
UBC84_DROME4.223e-1323.29Ubiquitin-conjugating enzyme E2-18 kDa OS=Drosophi... [more]
UBC18_ARATH5.515e-1333.86Probable ubiquitin carrier protein E2 18 OS=Arabid... [more]
UBC17_ARATH7.203e-1336.36Probable ubiquitin carrier protein E2 17 OS=Arabid... [more]
UB2J2_MOUSE7.203e-1331.75Ubiquitin-conjugating enzyme E2 J2 OS=Mus musculus... [more]
UB2J2_HUMAN1.229e-1232.23Ubiquitin-conjugating enzyme E2 J2 OS=Homo sapiens... [more]
UB2J2_BOVIN1.229e-1232.23Ubiquitin-conjugating enzyme E2 J2 OS=Bos taurus G... [more]
UBC12_CAEEL2.096e-1233.93NEDD8-conjugating enzyme ubc-12 OS=Caenorhabditis ... [more]
UBE2W_DICDI3.575e-1235.09Probable ubiquitin-conjugating enzyme E2 W OS=Dict... [more]
UBC33_ARATH1.774e-1130.60Probable ubiquitin carrier protein E2 33 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-C03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675044 ID=EY675044; Name=EY675044; organism=Citrus sinensis; type=EST; length=1005bp
TTCTTTCTCTAGAAGCTTCTCCTCTCATTCTCCCCCCTTACCCCCTCTGC
AAAAGCCGCTTCTCAGTTTTGCTCTCTAAAACGCCACTATGTCAACACCG
GCGAAGAAGCGGCTGATGCGGGACTTCAAGCGCCTCCAGCAAGATCCACC
CGCCGGAATCAGCGGGGCCCCTCAAGACAACAACATCATGTTATGGAACG
CCGTTATTTTTGGGCCTGATGATACTCCCTGGGACGGAGGTACGTTCAAG
TTGACTCTTCAGTTTACAGAGGATTATCCGAATAAACCTCCAACAGTTCG
GTTCGTTTCACGGATGTTTCATCCAAATATCTATGCGGATGGAAGTATCT
GCCTGGATATATTACAAAATCAGTGGAGTCCTATATATGATGTTGCAGCT
ATACTGACCTCCATCCAGTCGCTGCTTTGTGATCCAAATCCAAACTCCCC
TGCAAATTCTGAAGCAGCTCGGCTGTTTAGTGAGAATAAACGAGAGTACA
ACCGAAGAGTGCGTGAAATAGTGGAGCAAAGCTGGACAGCCGAATAAAAG
TCCAATGAAAGCACCGGCCGGTTATGCTGTAAAAATAAAAGATGAAACCT
GGGGGGCTGGGTGTGGCTGGGTTTGTTCAATAATAATGTAACCCCGAAAC
CAATCGGATTTTCAGGGGGTTTGGGTTATTAAAAAATCCCTCCGAATTTT
TTCCCCCCAAAAAGCTCTGGGGTGAACCCCCTGGGTAAATTTCCTCAAAA
TTTCCCCTTTCTTTTTCACCTCCTTTTCAGGGAACTTGGTAATTTTATCC
GGGACCTTTTTGGAAAGGGGGGTATTTTTGGCGGGCGGGGAAAACAGGGG
GATGGTGTTCTTTAAAAAACACAACCCCCAAGAAGAGAACCTCTTTTTTT
TTTTTTGGGGAAATTTTTTTTTTTACCGGGAATTTTTTTGGGGGGGGGTG
TTGGGGGAAGGGGGGCCGCCAAAAAAAATAAAAAAACAAAAAAAAAAAAT
AAAGA
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