EY675042
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675042 vs. ExPASy Swiss-Prot
Match: MED31_PHANO (Mediator of RNA polymerase II transcription subunit 31 OS=Phaeosphaeria nodorum GN=SOH1 PE=3 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 2.017e-16 Identity = 46/84 (54.76%), Postives = 56/84 (66.67%), Query Frame = 3 Query: 75 GRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYP-HCLYFLELLQNANFRNAMAHP--ANK 317 G RF LELEFVQCLANP Y++YLA +YF+ F+ YL YLQY+ P+YIKF+ +P L LELLQ FR + P ANK Sbjct: 17 GFTRFELELEFVQCLANPVYLNYLATQKYFDKPEFVAYLDYLQYFAEPKYIKFLHHPGPTLRALELLQQERFRQDIITPGLANK 100
BLAST of EY675042 vs. ExPASy Swiss-Prot
Match: MED31_NEUCR (Mediator of RNA polymerase II transcription subunit 31 OS=Neurospora crassa GN=soh-1 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 4.494e-16 Identity = 49/107 (45.79%), Postives = 60/107 (56.07%), Query Frame = 3 Query: 6 AKDP----EEASDAPSSPKKVHKDPD-DGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYP-HCLYFLELLQNANFRNAMAHP 308 A DP A + P+ P +P G RF LELEFVQ L NP Y+++LA + + AFI YL YLQYW RP Y+K+I YP L LELLQ FR + P Sbjct: 2 ASDPMSVNSSAREPPAPPGSGADEPKYGGYTRFELELEFVQALGNPLYLNHLASRKLLSNPAFIAYLDYLQYWSRPPYLKYITYPGPTLKNLELLQQEKFRQDIISP 108
BLAST of EY675042 vs. ExPASy Swiss-Prot
Match: MED31_USTMA (Mediator of RNA polymerase II transcription subunit 31 OS=Ustilago maydis GN=SOH1 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.087e-13 Identity = 43/121 (35.54%), Postives = 68/121 (56.20%), Query Frame = 3 Query: 6 AKDPEEASDAPSSPKKVHKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQN-ANFRNAMAHPANKELAHRQQFFFWKNYKN 365 A DP +++ A SP + + + F +LEF+ LANP Y+++LA + +F YLKYL Y++ P+Y+K++ YP L+FL+LLQN FR A PA +Q W +++ Sbjct: 8 ANDPIDSTLA--SPSRDEQRRQANQAAFSRDLEFLSSLANPYYLNHLALSGALSSPSFKRYLKYLDYFRHPKYVKYLHYPQALHFLDLLQNEEEFRLACRDPAFAGEVMAKQIGHWATWRD 126
BLAST of EY675042 vs. ExPASy Swiss-Prot
Match: MED31_ASHGO (Mediator of RNA polymerase II transcription subunit 31 OS=Ashbya gossypii GN=SOH1 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.308e-12 Identity = 39/90 (43.33%), Postives = 57/90 (63.33%), Query Frame = 3 Query: 21 EASDAPSSPKKVHKDPDDGRQ---RFLLELEFVQCLANPTYIHYL-AQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQN 278 ++S+ P P +G Q RF +ELEFVQ LAN Y+ +L Q++ ++D F YLKYL+YW P Y +FI+YP+CL+ L+LL + Sbjct: 4 KSSEPPFEPSS------EGEQLPSRFEVELEFVQSLANIPYVTFLLTQHQIWQDPRFKAYLKYLEYWCEPPYTQFIVYPNCLFVLKLLNS 87
BLAST of EY675042 vs. ExPASy Swiss-Prot
Match: MED31_YEAST (Mediator of RNA polymerase II transcription subunit 31 OS=Saccharomyces cerevisiae GN=SOH1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.352e-11 Identity = 36/82 (43.90%), Postives = 52/82 (63.41%), Query Frame = 3 Query: 30 DAPSSPKKVHKDPDDGRQRFLLELEFVQCLANPTYIHYL-AQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELL 272 +AP++P D + RF +ELEF+Q LAN Y+ YL Q + ++ F YLKYL+YW P Y + I+YP+CL+ L+LL Sbjct: 7 NAPATPSS---DQNPLPTRFEVELEFIQSLANIQYVTYLLTQQQIWKSPNFKNYLKYLEYWCNPPYSQCIVYPNCLFILKLL 85
BLAST of EY675042 vs. ExPASy Swiss-Prot
Match: MED31_KLULA (Mediator of RNA polymerase II transcription subunit 31 OS=Kluyveromyces lactis GN=SOH1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 5.684e-11 Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = 3 Query: 84 RFLLELEFVQCLANPTYIHYL-AQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELL 272 RF +ELEFVQ LAN Y+ YL Q + ++D F YLKYL+YW PEY + I+YP+ L+ L+LL Sbjct: 19 RFEIELEFVQSLANIPYVTYLLTQLQLWQDPKFKRYLKYLEYWHEPEYAQCIVYPNSLFVLKLL 82 The following BLAST results are available for this feature:
BLAST of EY675042 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY675042 ID=EY675042; Name=EY675042; organism=Citrus sinensis; type=EST; length=1078bpback to top |