EY675040

Overview
NameEY675040
Unique NameEY675040
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7945 contig Csv1_Contig7945:461..1033. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY675040 vs. ExPASy Swiss-Prot
Match: SUS1_HORVU (Sucrose synthase 1 OS=Hordeum vulgare GN=SS1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.329e-11
Identity = 25/60 (41.67%), Postives = 44/60 (73.33%), Query Frame = 1
Query:    1 QRIYECYTWKIYANKVLNMGSIYGFWRQINKEPKEAKQRYIQMFYSLLFRKLASNVPIKV 180
            +RIYE YTWK+Y+ +++ +  +YGFW+ ++   +   +RY++MFY+L +R LA+ VP+ V
Sbjct:  741 KRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAV 800          
BLAST of EY675040 vs. ExPASy Swiss-Prot
Match: SUS1_DAUCA (Sucrose synthase isoform 1 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.329e-11
Identity = 27/62 (43.55%), Postives = 45/62 (72.58%), Query Frame = 1
Query:    1 QRIYECYTWKIYANKVLNMGSIYGFWRQINKEPKEAKQRYIQMFYSLLFRKLASNVPIKVPE 186
            +RI E YTW+IY+ ++L +  +YGFW+ ++K  +   +RY++MFY+L +RKLA +VP+   E
Sbjct:  747 KRIQEKYTWQIYSERLLTLAGVYGFWKHVSKLDRLEIRRYLEMFYALKYRKLAESVPLAKDE 808          
BLAST of EY675040 vs. ExPASy Swiss-Prot
Match: SUSY_MEDSA (Sucrose synthase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.348e-11
Identity = 27/60 (45.00%), Postives = 43/60 (71.67%), Query Frame = 1
Query:    1 QRIYECYTWKIYANKVLNMGSIYGFWRQINKEPKEAKQRYIQMFYSLLFRKLASNVPIKV 180
            QRI E YTW IY+ ++L +  +YGFW+ ++   +   +RY++MFY+L +RKLA +VP+ V
Sbjct:  745 QRIEEKYTWTIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAV 804          
BLAST of EY675040 vs. ExPASy Swiss-Prot
Match: SUSY_ALNGL (Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.685e-11
Identity = 27/60 (45.00%), Postives = 43/60 (71.67%), Query Frame = 1
Query:    1 QRIYECYTWKIYANKVLNMGSIYGFWRQINKEPKEAKQRYIQMFYSLLFRKLASNVPIKV 180
            QRI+E YTWKIY+ ++L +  +  FW+ ++   +   +RYI+MFY+L +RKLA +VP+ V
Sbjct:  743 QRIHEKYTWKIYSERLLTLTGVTAFWKHVSNLDRLESRRYIEMFYALKYRKLAESVPLAV 802          
BLAST of EY675040 vs. ExPASy Swiss-Prot
Match: SUS2_HORVU (Sucrose synthase 2 OS=Hordeum vulgare GN=SS2 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.685e-11
Identity = 24/60 (40.00%), Postives = 43/60 (71.67%), Query Frame = 1
Query:    1 QRIYECYTWKIYANKVLNMGSIYGFWRQINKEPKEAKQRYIQMFYSLLFRKLASNVPIKV 180
            QRI E YTWK+Y+ +++ +  +YGFW+ ++   +   +RY++M Y+L +RK+A+ VP+ V
Sbjct:  750 QRIEEKYTWKLYSERLMTLSGVYGFWKYVSNLDRRETRRYLEMLYALKYRKMAATVPLAV 809          
The following BLAST results are available for this feature:
BLAST of EY675040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
SUS1_HORVU3.329e-1141.67Sucrose synthase 1 OS=Hordeum vulgare GN=SS1 PE=1 ... [more]
SUS1_DAUCA3.329e-1143.55Sucrose synthase isoform 1 OS=Daucus carota PE=2 S... [more]
SUSY_MEDSA4.348e-1145.00Sucrose synthase OS=Medicago sativa PE=2 SV=1[more]
SUSY_ALNGL9.685e-1145.00Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 S... [more]
SUS2_HORVU9.685e-1140.00Sucrose synthase 2 OS=Hordeum vulgare GN=SS2 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-B10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675040 ID=EY675040; Name=EY675040; organism=Citrus sinensis; type=EST; length=574bp
CAACGTATATATGAATGCTATACATGGAAGATTTATGCAAACAAAGTGCT
GAACATGGGATCCATTTATGGATTTTGGAGGCAGATAAACAAAGAACCAA
AGGAAGCTAAGCAAAGATACATCCAGATGTTCTATAGTCTCCTGTTCAGG
AAACTAGCAAGTAATGTACCCATCAAAGTTCCTGAACCTCTACAATCAGC
ACAAACTTCACCAGTTGAATCCCAGCAACCTGCAGCAGCAACAGGGATAG
CTAAACCCCAGCCACCAGCATCAGCAGTGATAGATAAACCTAACCAACAA
GAAAAGACCGCTCAGCAAAAGAAAAGGGAAGAAGGTTCAGAGCTGAAGCC
GCCTAGCTCTCAGCAAATAAGGAATCCTGTACGTGACCTTTGGACCCAGT
GGGGCATCACCATTGGCTTTCTCTTCATCATCTATTACCTTCTCAAGAGA
TTGTATTGCATGTTTATGTAAATGTATCATCAAGACAGTGACACATATGC
CGTTATTTGTAAGCAATTTGTTCACAATAATAAGAAAAATCCCAGCCTTC
TATCTGAAAAAAAAAAAAAAAAAG
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