EY675039

Overview
NameEY675039
Unique NameEY675039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1015
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.945e-48
Identity = 84/146 (57.53%), Postives = 101/146 (69.18%), Query Frame = 2
Query:   83 GGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCV---NDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG--RHQVHNH 505
            GGGGW +A ATFY              YGNLYSQGYGTNTAALSTALFNNGLSCG+C+E++C         CLPG+++VTATNFC          GGWCNPP+ HFD+SQPVFQ IA ++AG+VPV+Y+RV C KKG  R  ++ H
Sbjct:   60 GGGGWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAGGGGSHSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALFKAGIVPVSYRRVACQKKGGIRFTINGH 205          

HSP 2 Score: 36.1946 bits (82), Expect = 1.945e-48
Identity = 18/39 (46.15%), Postives = 23/39 (58.97%), Query Frame = 1
Query:  514 SYFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630
            SYF+ +L+TNVGGAGDVH +   K  +         NWG
Sbjct:  206 SYFNLVLVTNVGGAGDVHAV-AVKSERSAAWQALSRNWG 243          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 2.393e-48
Identity = 85/135 (62.96%), Postives = 101/135 (74.81%), Query Frame = 2
Query:   86 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            GG WINA ATFY              YGNLYSQGYG NTAALSTALFNNGLSCGSC+E+KC+NDP WCLPG  +I++TATNFC          GGWCNPP++HFDL+ P+F  IA+Y+AG+VPV+Y+R+PC KKG
Sbjct:   29 GGPWINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKG 163          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.114e-47
Identity = 84/144 (58.33%), Postives = 99/144 (68.75%), Query Frame = 2
Query:   86 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG--RHQVHNH 505
            GG W  A ATFY              YGNLYSQGYGTNTAALST+LFN+G SCG+C+EIKCVNDPKWC PG  ++ VTATNFC          GGWCNPP+ HFDL+ PVF  IA+YRAG+VP++Y+RV C K G  R  ++ H
Sbjct:   31 GGSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGH 174          

HSP 2 Score: 29.261 bits (64), Expect = 2.114e-47
Identity = 18/38 (47.37%), Postives = 22/38 (57.89%), Query Frame = 1
Query:  517 YFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630
            YF+ +LITNV GAGD+      KG K G  +    NWG
Sbjct:  176 YFNLVLITNVAGAGDI-ARTSVKGSKTGWMSL-TRNWG 211          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 3.462e-47
Identity = 80/135 (59.26%), Postives = 95/135 (70.37%), Query Frame = 2
Query:   86 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            GGGW  A ATFY              YGNLYSQGYG NTAALSTALFNNG SCG+C+E+KC +DPKWC  G  +I +TATNFC          GGWCNPP+ HFDL+ P+F  IA+YRAG+VPV+++RVPC K+G
Sbjct:   28 GGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRG 162          

HSP 2 Score: 26.1794 bits (56), Expect = 3.462e-47
Identity = 11/14 (78.57%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  468 PAEKRGGIRFTIIG 509
            P  KRGGIRFTI G
Sbjct:  157 PCRKRGGIRFTING 170          

HSP 3 Score: 25.7942 bits (55), Expect = 3.462e-47
Identity = 16/38 (42.11%), Postives = 22/38 (57.89%), Query Frame = 1
Query:  517 YFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630
            YF+ +L+TNV GAG++  L   KG      T  + NWG
Sbjct:  173 YFNLVLVTNVAGAGNIVRL-GVKGTHTSWMTMSR-NWG 208          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 4.682e-47
Identity = 78/141 (55.32%), Postives = 95/141 (67.38%), Query Frame = 2
Query:   89 GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG--RHQVHNH 505
            G W +A ATFY              YGNLYS GYGTNTAALST LFN+G +CGSCYE++C ND +WCLPG++ VTATN C          GGWCNPP+ HFD+++P F  I  YRAG+VPV+Y+RVPC KKG  R  ++ H
Sbjct:   27 GSWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCYELRCDNDGQWCLPGSVTVTATNLCPPNYALPNDDGGWCNPPRPHFDMAEPAFLQIGVYRAGIVPVSYRRVPCVKKGGIRFTINGH 167          

HSP 2 Score: 35.039 bits (79), Expect = 4.682e-47
Identity = 21/48 (43.75%), Postives = 28/48 (58.33%), Query Frame = 1
Query:  514 SYFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWGPKTGQTNTY 657
            SYF+ +L+TNV G GDV  +   KG   G   P   NWG +  Q+N+Y
Sbjct:  168 SYFNLVLVTNVAGPGDVQSV-SIKGSSTG-WQPMSRNWG-QNWQSNSY 212          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.229e-44
Identity = 84/140 (60.00%), Postives = 99/140 (70.71%), Query Frame = 2
Query:   77 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDP--KWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            A GGG W +A ATFY              YGNLYSQGYG N AALSTALFN+G SCG+C+EIKCVN P  +WC PG+  I++TATNFC          GGWCNPP+ HFDL+ P+F HIA+YRAG+VPV+Y+RVPC KKG
Sbjct:   30 AYGGGEWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKKG 169          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 5.971e-44
Identity = 79/149 (53.02%), Postives = 99/149 (66.44%), Query Frame = 2
Query:   74 HANGG--GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG--RHQVHNH 505
            H  GG  G WINA ATFY              YGNLYSQGYG  TAALSTALF+ GLSCG+C+E+ CVNDP+WC+ G +I+VTATNFC          GG C+PP  HFDLSQP+++ IA Y++G++PV Y+RV C + G  R  ++ H
Sbjct:   29 HHPGGHMGPWINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGRSIVVTATNFC--------PPGGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGH 169          

HSP 2 Score: 37.7354 bits (86), Expect = 5.971e-44
Identity = 22/48 (45.83%), Postives = 31/48 (64.58%), Query Frame = 1
Query:  514 SYFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWGPKTGQTNTY 657
            SYF+ +L+TNVGGAGDVH +   KG +       + NWG +  Q+N+Y
Sbjct:  170 SYFNLVLVTNVGGAGDVHSV-SMKGSRTKWQLMSR-NWG-QNWQSNSY 214          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.321e-43
Identity = 79/146 (54.11%), Postives = 96/146 (65.75%), Query Frame = 2
Query:   83 GGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND-PKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG--RHQVHNH 505
            G G W    ATFY              YGNLYSQGYGT+TAALSTALFN GLSCGSCYE++C  D  + CLPG  T+ VTATNFC          GGWCNPP++HFDL++P F  IA++ AG+VPV+++RV C +KG  R  V+ H
Sbjct:   24 GLGQWQPGHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNRGLSCGSCYELRCAGDHRRSCLPGGATVTVTATNFCPPNYALPSDGGGWCNPPRRHFDLAEPAFLRIARHAAGIVPVSFRRVACARKGGVRFTVNGH 169          

HSP 2 Score: 37.7354 bits (86), Expect = 1.321e-43
Identity = 22/52 (42.31%), Postives = 30/52 (57.69%), Query Frame = 1
Query:  514 SYFHPMLITNVGGAGDVHGLF---PSKGPKI-GLGTPGQENWGPKTGQTNTY 657
            +YF+ +L+TNVGGAGDV  L       G ++ G   P   NWG +  Q+N Y
Sbjct:  170 AYFNLVLVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRNWG-QNWQSNAY 220          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 2.241e-43
Identity = 75/130 (57.69%), Postives = 90/130 (69.23%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            W +ARATFY              YG+L+ QGYG  TAALSTALFN G +CG+CY+I CV+DP+WCLPGTI +TATNFC          G WCNPPQ+HFDLS P+F  IAQY+AGVVPV Y+R+ C + G
Sbjct:   55 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVHDPQWCLPGTIKITATNFC--PPDYSKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTG 182          

HSP 2 Score: 31.9574 bits (71), Expect = 2.241e-43
Identity = 20/38 (52.63%), Postives = 23/38 (60.53%), Query Frame = 1
Query:  517 YFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630
            YF  +L  NVGGAGD+  L   KG K G  T  Q+NWG
Sbjct:  193 YFLMILPYNVGGAGDIK-LMQVKGDKTGWITM-QKNWG 228          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 2.242e-43
Identity = 74/130 (56.92%), Postives = 90/130 (69.23%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            W +ARATFY              YG+L+ QGYG  TAALSTALFN G +CG+CY+I CVNDP+WCLPG++ +TATNFC          G WCNPPQ+HFDLS P+F  IAQY+AGVVPV Y+R+ C + G
Sbjct:   48 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNFC--PPDYSKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTG 175          

HSP 2 Score: 31.9574 bits (71), Expect = 2.242e-43
Identity = 20/38 (52.63%), Postives = 23/38 (60.53%), Query Frame = 1
Query:  517 YFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630
            YF  +L  NVGGAGD+  L   KG K G  T  Q+NWG
Sbjct:  186 YFLMILPYNVGGAGDIK-LMQVKGDKTGWITM-QKNWG 221          
The following BLAST results are available for this feature:
BLAST of EY675039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
EXPA5_ORYSJ1.945e-4857.53Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA9_ARATH2.393e-4862.96Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 ... [more]
EXP16_ARATH2.114e-4758.33Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=... [more]
EXPA6_ARATH3.462e-4759.26Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 ... [more]
EXPA2_ORYSJ4.682e-4755.32Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA7_ORYSJ1.229e-4460.00Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA5_ARATH5.971e-4453.02Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 ... [more]
EXPA6_ORYSJ1.321e-4354.11Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP25_ARATH2.241e-4357.69Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=... [more]
EXP23_ARATH2.242e-4356.92Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-B08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675039 ID=EY675039; Name=EY675039; organism=Citrus sinensis; type=EST; length=1015bp
GCTTCCATTTCTCCACAAAATGTATTTTGCTGGGTTTTTCTCGTTGGGTT
TCCTTGCATTGGTGTCCTCCGTTCATGCTAATGGAGGCGGTGGGTGGATC
AATGCTCGTGCCACTTTCTATGGTGGTGGCGATGCTTCAGGGACTATGGG
TGGGGCTTGTGGCTATGGGAATCTGTATAGCCAGGGTTATGGAACGAACA
CTGCAGCCTTGAGCACGGCTTTGTTCAACAACGGTTTGAGCTGTGGGTCT
TGCTATGAGATTAAGTGTGTTAATGACCCCAAATGGTGCTTGCCCGGCAC
CATTATGGTCACAGCTACCAATTTTTGCCCACCGAACAACGCCCTCCCCA
ACAATGCAGGCGGTTGGTGCAATCCTCCGCAGCAACATTTTGATCTCTCT
CAGCCTGTGTTCCAACACATTGCTCAATACAGAGCTGGAGTTGTCCCTGT
AACTTACAAGAGGGTACCCTGCGGAAAAAAGGGGAGGCATCAGGTTCACA
ATCATTGGCCATTTCCTACTTCCACCCTATGTTGATCACCAACGTTGGTG
GTGCTGGTGATGTTCATGGCCTGTTTCCATCCAAAGGTCCTAAAATTGGG
CTGGGAACCCCTGGTCAAGAAAACTGGGGGCCAAAAACCGGGCAAACCAA
CACTTATTCTCAATGGGCCCAAAGGCCGGTTCTTTTAAAGGGCCACCCCA
AGCCAAGGCCCCCCCTTTGTGAACTTTCCCATCAAATGTTTGGCCCCCGG
CCTAACCGGGTCCTTTTGGCCAAAAATTTACCTCCGGGGGCTCCATTTTC
CCCCTTAAAACCCCCCCAAAAAACCAATAAAAAAAATTGGGGGTTTTTAT
AAACCCCTTTTTTTTTAACCACAAAAAAATTTGCGGTGGTCATAAAAGAT
TGAAAAATATTTTTTTTTGATAATAAAAAAAAAATTTTTTTTCCACCCCC
ACCTAAAGGGGAGGGGTTAATTTTAAATAATATTTTATTTTAAAATATAA
TAAAATAATATAATA
back to top