EY675039

Overview
NameEY675039
Unique NameEY675039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1015
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 5.802e-43
Identity = 74/136 (54.41%), Postives = 87/136 (63.97%), Query Frame = 2
Query:   77 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            A G  GW +  ATFY              YGNLYS GYGT+TAALSTALFNNG SCG+C+E++C      CL GT+ VTATN C          GGWCNPP+ HFD+++P F  IAQ RAGVVPV Y+RV C K+G
Sbjct:   21 AGGDSGWSSGSATFYGGSDASGTMGGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRCGGGGS-CLAGTVAVTATNLCPPNYALAGDAGGWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYRRVACAKQG 155          

HSP 2 Score: 33.4982 bits (75), Expect = 5.802e-43
Identity = 19/39 (48.72%), Postives = 24/39 (61.54%), Query Frame = 1
Query:  514 SYFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630
            SYF+ +L+TNVGGAGDV  +   KG + G       NWG
Sbjct:  165 SYFNLVLVTNVGGAGDVTAV-SVKGSRSGWQAM-SHNWG 201          

HSP 3 Score: 25.7942 bits (55), Expect = 5.802e-43
Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 3
Query:  477 KRGGIRFTIIGH 512
            K+GGIRFTI GH
Sbjct:  153 KQGGIRFTITGH 164          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 6.300e-40
Identity = 73/143 (51.05%), Postives = 92/143 (64.34%), Query Frame = 2
Query:   92 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG--RHQVHNH 505
            GW+ A ATFY              YGNLY+QGYGT TAALSTALFN+GL+CG CY++ C    D  WC PG ++ +TATNFC          GGWCNPP+ HFD++QP ++ I  YR G++PV Y+RVPC KKG  R  ++ H
Sbjct:   33 GWVRAHATFYGGADASGTMGGACGYGNLYAQGYGTRTAALSTALFNDGLACGQCYKLVCDRKTDRTWCKPGVSVTITATNFCPPNWDLPSDSGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGH 175          

HSP 2 Score: 27.335 bits (59), Expect = 6.300e-40
Identity = 15/38 (39.47%), Postives = 19/38 (50.00%), Query Frame = 1
Query:  517 YFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630
            YF  +L+TNVG AG +  +   KG K         NWG
Sbjct:  177 YFQLVLLTNVGAAGSIKAM-DVKGSKSPDWMAMAHNWG 213          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.394e-39
Identity = 71/134 (52.99%), Postives = 87/134 (64.93%), Query Frame = 2
Query:   92 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            GW+ A ATFY              YGNLY+ GY TNTAALSTALFN+G SCG CY+I C     P+WCL G +I +TATNFC          GGWCNPP+ HFD++QP F  IA+Y+AG+VP+ YK+V C + G
Sbjct:   27 GWLQAHATFYGGSDASGTMGGACGYGNLYTDGYKTNTAALSTALFNDGKSCGGCYQILCDATKVPQWCLKGKSITITATNFCPPNFAQASDNGGWCNPPRPHFDMAQPAFLTIAKYKAGIVPILYKKVGCRRSG 160          

HSP 2 Score: 31.187 bits (69), Expect = 1.394e-39
Identity = 18/48 (37.50%), Postives = 26/48 (54.17%), Query Frame = 1
Query:  514 SYFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWGPKTGQTNTY 657
            +YF  +LI+NV G G++  ++  KG K         NWG    Q+NTY
Sbjct:  170 NYFELVLISNVAGGGEISKVW-IKGSKSNKWETMSRNWGANY-QSNTY 215          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 3.463e-39
Identity = 75/131 (57.25%), Postives = 89/131 (67.94%), Query Frame = 2
Query:   92 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            GW + RATFY              YG+L+ QGYG  TAALSTALFNNG  CG+CYEI C + P+WCLPG+I +TATNFC            WCNPPQ+HFDLSQP+F  IA+Y+AGVVPV ++RVPC K G
Sbjct:   89 GWGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPGSIKITATNFC--PPDFTKPNDNWCNPPQKHFDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIG 217          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 4.523e-39
Identity = 73/130 (56.15%), Postives = 88/130 (67.69%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            W +ARATFY              YGNL+ QGYG  TAALSTALFN+G +CG+CYEI C  DP+WCLPG++ +TATNFC            WCNPPQ+HFDLS  +F  IA+Y+AGVVPV Y+R+PC K G
Sbjct:   58 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTG 185          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 4.523e-39
Identity = 73/130 (56.15%), Postives = 88/130 (67.69%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            W +ARATFY              YGNL+ QGYG  TAALSTALFN+G +CG+CYEI C  DP+WCLPG++ +TATNFC            WCNPPQ+HFDLS  +F  IA+Y+AGVVPV Y+R+PC K G
Sbjct:   52 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTG 179          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 9.572e-39
Identity = 69/139 (49.64%), Postives = 86/139 (61.87%), Query Frame = 2
Query:   77 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVN--DPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            A    GW    ATFY              YGNLY+QGYGT TAALSTALF++G SCG CY + C    DP+WC  G ++ VTATNFC          GGWCNPP+ HFD++QP ++ I  YR G+VPV ++RVPC ++G
Sbjct:   28 AFAASGWSKGTATFYGGSDASGTMGGACGYGNLYTQGYGTRTAALSTALFDDGASCGQCYALTCDARADPRWCRAGASVTVTATNFCPPNYALPSDDGGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRRVPCRRRG 166          

HSP 2 Score: 26.9498 bits (58), Expect = 9.572e-39
Identity = 15/39 (38.46%), Postives = 20/39 (51.28%), Query Frame = 1
Query:  517 YFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPG-QENWG 630
            YF  +L+TNV  AG V  +   +G + G G      NWG
Sbjct:  177 YFELVLVTNVAAAGSVRSM-EVRGSRRGAGWMAMSRNWG 214          

HSP 3 Score: 25.0238 bits (53), Expect = 9.572e-39
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  468 PAEKRGGIRFTIIG 509
            P  +RGG+RFT+ G
Sbjct:  161 PCRRRGGVRFTVAG 174          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.507e-38
Identity = 74/142 (52.11%), Postives = 89/142 (62.68%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG--RHQVHNH 505
            W  A ATFY              YGNLYSQGYGT  AALSTALFN+G SCG CY+I C     P+WC PG T+ +TATNFC          GGWCNPP+ HFD++QP ++ I  Y AG++PV Y+RVPC KKG  R  ++ H
Sbjct:   39 WQKAHATFYGGADASGTMGGACGYGNLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGH 180          

HSP 2 Score: 25.409 bits (54), Expect = 1.507e-38
Identity = 13/38 (34.21%), Postives = 17/38 (44.74%), Query Frame = 1
Query:  517 YFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630
            YF  +L+TNV  AG +  +    G       P   NWG
Sbjct:  182 YFQLVLVTNVAAAGSIKSM-EVMGSNTADWMPMARNWG 218          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.335e-38
Identity = 75/141 (53.19%), Postives = 88/141 (62.41%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG--RHQVHNH 505
            W  A ATFY              YG+LY  GYGT TAALSTALFN G SCG+C+ I C     +WC PGT I VTATNFC          GGWCNPP++HFD+SQP ++ IA YRAG+VPV Y+RVPC + G  R  V+ H
Sbjct:   25 WTPAFATFYGGSDASGTMGGACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWCKPGTSITVTATNFCPPNYALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGH 165          

HSP 2 Score: 28.1054 bits (61), Expect = 3.335e-38
Identity = 17/39 (43.59%), Postives = 23/39 (58.97%), Query Frame = 1
Query:  514 SYFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630
            SYF  +L+TNVGG+G V  ++  KG   G     + NWG
Sbjct:  166 SYFELVLVTNVGGSGAVAQMW-IKGSGTGWMAMSR-NWG 202          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 3.554e-38
Identity = 68/134 (50.75%), Postives = 86/134 (64.18%), Query Frame = 2
Query:   92 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVN--DPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            GW +  ATFY              YGNLY  GYGTNTAALS+ALFN+G SCG CY+I C +  +P+WCL G T+ +T TN C          GGWCNPP+ HFD+++P +  I  Y+AG+VPV Y+RVPC K+G
Sbjct:   31 GWSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGRTVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQG 164          

HSP 2 Score: 29.261 bits (64), Expect = 3.554e-38
Identity = 19/55 (34.55%), Postives = 27/55 (49.09%), Query Frame = 1
Query:  514 SYFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWGPK-------TGQTNTY 657
            +YF  +LI+NV G+G +  ++  KGP      P   NWG          GQT T+
Sbjct:  174 NYFELVLISNVAGSGSIQSVW-VKGPNTD-RMPLSRNWGANWQSHAGLVGQTLTF 226          

HSP 3 Score: 21.9422 bits (45), Expect = 3.554e-38
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  468 PAEKRGGIRFTIIG 509
            P  K+GG+RFT+ G
Sbjct:  159 PCVKQGGVRFTMGG 172          
The following BLAST results are available for this feature:
BLAST of EY675039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
EXP11_ORYSJ5.802e-4354.41Expansin-A11 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP13_ORYSJ6.300e-4051.05Expansin-A13 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP17_ARATH1.394e-3952.99Putative expansin-A17 OS=Arabidopsis thaliana GN=E... [more]
EXP24_ARATH3.463e-3957.25Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=... [more]
EXP26_ARATH4.523e-3956.15Putative expansin-A26 OS=Arabidopsis thaliana GN=E... [more]
EXP22_ARATH4.523e-3956.15Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=... [more]
EXP29_ORYSJ9.572e-3949.64Expansin-A29 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP23_ORYSJ1.507e-3852.11Expansin-A23 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA8_ORYSJ3.335e-3853.19Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP15_ORYSJ3.554e-3850.75Expansin-A15 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-B08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675039 ID=EY675039; Name=EY675039; organism=Citrus sinensis; type=EST; length=1015bp
GCTTCCATTTCTCCACAAAATGTATTTTGCTGGGTTTTTCTCGTTGGGTT
TCCTTGCATTGGTGTCCTCCGTTCATGCTAATGGAGGCGGTGGGTGGATC
AATGCTCGTGCCACTTTCTATGGTGGTGGCGATGCTTCAGGGACTATGGG
TGGGGCTTGTGGCTATGGGAATCTGTATAGCCAGGGTTATGGAACGAACA
CTGCAGCCTTGAGCACGGCTTTGTTCAACAACGGTTTGAGCTGTGGGTCT
TGCTATGAGATTAAGTGTGTTAATGACCCCAAATGGTGCTTGCCCGGCAC
CATTATGGTCACAGCTACCAATTTTTGCCCACCGAACAACGCCCTCCCCA
ACAATGCAGGCGGTTGGTGCAATCCTCCGCAGCAACATTTTGATCTCTCT
CAGCCTGTGTTCCAACACATTGCTCAATACAGAGCTGGAGTTGTCCCTGT
AACTTACAAGAGGGTACCCTGCGGAAAAAAGGGGAGGCATCAGGTTCACA
ATCATTGGCCATTTCCTACTTCCACCCTATGTTGATCACCAACGTTGGTG
GTGCTGGTGATGTTCATGGCCTGTTTCCATCCAAAGGTCCTAAAATTGGG
CTGGGAACCCCTGGTCAAGAAAACTGGGGGCCAAAAACCGGGCAAACCAA
CACTTATTCTCAATGGGCCCAAAGGCCGGTTCTTTTAAAGGGCCACCCCA
AGCCAAGGCCCCCCCTTTGTGAACTTTCCCATCAAATGTTTGGCCCCCGG
CCTAACCGGGTCCTTTTGGCCAAAAATTTACCTCCGGGGGCTCCATTTTC
CCCCTTAAAACCCCCCCAAAAAACCAATAAAAAAAATTGGGGGTTTTTAT
AAACCCCTTTTTTTTTAACCACAAAAAAATTTGCGGTGGTCATAAAAGAT
TGAAAAATATTTTTTTTTGATAATAAAAAAAAAATTTTTTTTCCACCCCC
ACCTAAAGGGGAGGGGTTAATTTTAAATAATATTTTATTTTAAAATATAA
TAAAATAATATAATA
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