EY675039
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 6.531e-38 Identity = 74/142 (52.11%), Postives = 91/142 (64.08%), Query Frame = 2
Query: 95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG--RHQVHNH 505
W+ A ATFY YG+LYSQGYGT AALSTALFN+G SCG CY+I C P+WC PG T+ +TATNFC GGWCNPP+ HFD++QP ++ I YRAG++PV Y+RVPC KKG R ++ H
Sbjct: 52 WLKAHATFYGGADASGTMGGACGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCRPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGH 193
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 1.630e-37 Identity = 69/139 (49.64%), Postives = 84/139 (60.43%), Query Frame = 2
Query: 77 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
A GGW++ ATFY YGNLY+QGYG AALSTALFN G SCG CY I C P+WC GT + +TATN C GGWCNPP+ HFD+SQP ++ I YRAG+VPV Y++V C ++G
Sbjct: 21 AAAAGGWVSGTATFYGGKDASGTMGGACGYGNLYTQGYGVYNAALSTALFNGGASCGQCYLIMCDASKTPEWCKAGTAVTITATNLCPPNWALANDDGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQG 159 HSP 2 Score: 31.187 bits (69), Expect = 1.630e-37 Identity = 18/39 (46.15%), Postives = 22/39 (56.41%), Query Frame = 1
Query: 514 SYFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630
+YF +LITNV G+G V + KG K G P NWG
Sbjct: 169 NYFELVLITNVAGSGSVQAM-SVKGSKTG-WIPLARNWG 205
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 2.225e-37 Identity = 66/143 (46.15%), Postives = 81/143 (56.64%), Query Frame = 2
Query: 74 HANGG----GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
H N G G W A ATFY Y + +GYG T A+ST LF G CG+CYE+KCV+ P C G ++VTATN C GGWCNPP++HFDLS P F IAQ +AG+VP++Y+RVPC K G
Sbjct: 31 HRNHGKFTAGPWKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVG 173 HSP 2 Score: 39.2762 bits (90), Expect = 2.225e-37 Identity = 23/54 (42.59%), Postives = 33/54 (61.11%), Query Frame = 1
Query: 517 YFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWGPK-------TGQTNTY 657
YF+ ++++NVGGAGDV GL KG K TP + NWG + TG++ T+
Sbjct: 184 YFNLVMVSNVGGAGDVAGL-SVKGNKRVKWTPLKRNWGQEWQTSEVLTGESLTF 236 HSP 3 Score: 22.3274 bits (46), Expect = 2.225e-37 Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 3
Query: 468 PAEKRGGIRFTIIGH 512
P K GGIR+TI G+
Sbjct: 168 PCVKVGGIRYTITGN 182
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 3.599e-37 Identity = 74/142 (52.11%), Postives = 90/142 (63.38%), Query Frame = 2
Query: 95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG--RHQVHNH 505
W+ A ATFY Y +LYSQGYGT AALSTALFN+G SCG CY+I C P+WC PG T+ VTATNFC GGWCNPP+ HFD++QP ++ I YRAG++PV Y+RVPC KKG R ++ H
Sbjct: 50 WLKAHATFYGGADASGTMGGACGYVDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTVTATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVMYQRVPCVKKGGVRFTINGH 191 HSP 2 Score: 21.9422 bits (45), Expect = 3.599e-37 Identity = 12/38 (31.58%), Postives = 17/38 (44.74%), Query Frame = 1
Query: 517 YFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630
YF+ +L+TNV G + + G P NWG
Sbjct: 193 YFNLVLVTNVATTGSIKSM-DIMGSNSTDWMPMVRNWG 229
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 4.693e-37 Identity = 73/142 (51.41%), Postives = 89/142 (62.68%), Query Frame = 2
Query: 95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG--RHQVHNH 505
W A ATFY YG+LYSQGYGT AALSTALFN+G SCG CY+I C P+WC PG T+ +TATNFC GGWCNPP+ HFD++QP ++ I Y AG++PV Y+RVPC KKG R ++ H
Sbjct: 34 WQKAHATFYGGADASGTMGGGCGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQRVPCIKKGGVRFTINGH 175 HSP 2 Score: 23.0978 bits (48), Expect = 4.693e-37 Identity = 16/54 (29.63%), Postives = 23/54 (42.59%), Query Frame = 1
Query: 517 YFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWGPK-------TGQTNTY 657
YF+ +L+TNV G + + G P NWG TGQT ++
Sbjct: 177 YFNLVLVTNVATTGSIKSM-DIMGSNSTDWMPMVRNWGANWHSLSYLTGQTLSF 229
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 1.396e-36 Identity = 68/134 (50.75%), Postives = 83/134 (61.94%), Query Frame = 2
Query: 92 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
GW A ATFY YG+LYS GYGTNTAALST LFN+G SCG CY I C D ++C+ GT + +TATN C GGWCNPP+QHFD+++P + I Y G+VPV Y+RVPC K+G
Sbjct: 33 GWNKAFATFYGGSDASGTMGGACGYGDLYSTGYGTNTAALSTVLFNDGASCGQCYRIMCDYQADRRFCISGTSVTITATNLCPPNYALPNDAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQG 166 HSP 2 Score: 28.1054 bits (61), Expect = 1.396e-36 Identity = 17/47 (36.17%), Postives = 25/47 (53.19%), Query Frame = 1
Query: 517 YFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWGPKTGQTNTY 657
YF +L++NVGG G + + KG + G + NWG Q+N Y
Sbjct: 177 YFELVLVSNVGGVGSIQSV-SIKGSRTGWMAMSR-NWG-VNWQSNAY 220 HSP 3 Score: 23.8682 bits (50), Expect = 1.396e-36 Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 3
Query: 468 PAEKRGGIRFTIIG 509
P K+GG+RFTI G
Sbjct: 161 PCAKQGGVRFTING 174
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 5.074e-36 Identity = 69/134 (51.49%), Postives = 85/134 (63.43%), Query Frame = 2
Query: 92 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVN--DPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
G N ATFY YG+LYS GYGT TAALSTALFN+G SCG CY I C + D +WCL G ++++TATNFC GGWCNPP +HFD++QP ++ I YR G+VPV ++RV C KKG
Sbjct: 25 GLTNGHATFYGGSDASGTMGGACGYGDLYSAGYGTMTAALSTALFNDGASCGECYRITCDHAADSRWCLKGASVVITATNFCPPNFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVVFQRVSCYKKG 158 HSP 2 Score: 27.335 bits (59), Expect = 5.074e-36 Identity = 19/47 (40.43%), Postives = 23/47 (48.94%), Query Frame = 1
Query: 517 YFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWGPKTGQTNTY 657
YF + I NVGGAG + + KG K G NWG Q+N Y
Sbjct: 169 YFELVNIQNVGGAGSIKSV-SIKGSKTG-WLAMSRNWG-ANWQSNAY 212
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.903e-35 Identity = 69/132 (52.27%), Postives = 82/132 (62.12%), Query Frame = 2
Query: 95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
W A ATFY YGNLY+ GYG N AALS+ALFN+G CG+CY I C + WC PGT I +TATN C GGWCNPP++HFD+SQP + IA Y+AG+VPV +KRVPC K G
Sbjct: 23 WTPATATFYGGSDGAGTMGGACGYGNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGTSITITATNLCPPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSG 154 HSP 2 Score: 25.0238 bits (53), Expect = 1.903e-35 Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3
Query: 468 PAEKRGGIRFTIIG 509
P +K GGIRFTI G
Sbjct: 149 PCQKSGGIRFTISG 162
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.576e-34 Identity = 69/133 (51.88%), Postives = 82/133 (61.65%), Query Frame = 2
Query: 95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDP--KWCLP-GTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
WI A ATFY YGNLY QGYG AALSTALFN+G +CG CY I C D +WC P G + VTATN C GGWCNPP++HFD+SQP ++ I YRAG+VPV Y+RV C ++G
Sbjct: 27 WIPATATFYGGNDGSGTMGGACGYGNLYDQGYGLENAALSTALFNDGAACGQCYLIVCDTDKAGRWCKPRGAVTVTATNLCPPNWALPSDGGGWCNPPRRHFDMSQPAWERIGVYRAGIVPVLYRRVRCWRRG 159 HSP 2 Score: 21.9422 bits (45), Expect = 1.576e-34 Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 3
Query: 477 KRGGIRFTIIG--HFLL 521
+RGG+RFT+ G HF L
Sbjct: 157 RRGGVRFTVGGFDHFEL 173
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 2.027e-34 Identity = 64/132 (48.48%), Postives = 83/132 (62.88%), Query Frame = 2
Query: 95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
W +A ATFY YGN+YS GYGTNT ALS+AL+ +G SCG+CY + C + +WC GT + VTATN+C GGWCNPP++HFD+SQP ++ IA Y +G+VPV Y R PC + G
Sbjct: 27 WTSATATFYGGSDASGTMGGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGTSVTVTATNYCPPNYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVG 158 HSP 2 Score: 24.6386 bits (52), Expect = 2.027e-34 Identity = 17/50 (34.00%), Postives = 24/50 (48.00%), Query Frame = 1
Query: 517 YFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPG---QENWGPKTGQTNTY 657
Y+ +L+TNV G+G V + G GT NWG + Q+N Y
Sbjct: 169 YYELVLVTNVAGSGAVAAAWVK-----GSGTEWLSMSRNWG-ENWQSNAY 212 HSP 3 Score: 23.0978 bits (48), Expect = 2.027e-34 Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = 3
Query: 468 PAEKRGGIRFTIIGH 512
P + GGIRF I GH
Sbjct: 153 PCRRVGGIRFGIAGH 167 The following BLAST results are available for this feature:
BLAST of EY675039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675039 ID=EY675039; Name=EY675039; organism=Citrus sinensis; type=EST; length=1015bpback to top |