EY675039

Overview
NameEY675039
Unique NameEY675039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1015
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 4.445e-34
Identity = 67/133 (50.38%), Postives = 80/133 (60.15%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            W  A ATFY              YGNLY QGYG + AALS ALFN+G SCG CY I C     P+WC  GT + VTATN C          GGWCNPP+ HFD+SQP ++ I  Y+AG+VPV Y+RV C ++G
Sbjct:   28 WSPATATFYGGSDGSGTMGGACGYGNLYDQGYGVDNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGTAVTVTATNLCPPNWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQG 160          

HSP 2 Score: 26.5646 bits (57), Expect = 4.445e-34
Identity = 16/40 (40.00%), Postives = 21/40 (52.50%), Query Frame = 1
Query:  511 ISYFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630
            ++YF  +LITNV G+G V   +  KG   G       NWG
Sbjct:  169 LNYFELVLITNVAGSGSVASAW-IKGTNTG-WIQMSRNWG 206          

HSP 3 Score: 20.7866 bits (42), Expect = 4.445e-34
Identity = 6/11 (54.55%), Postives = 10/11 (90.91%), Query Frame = 3
Query:  477 KRGGIRFTIIG 509
            ++GG+RFT+ G
Sbjct:  158 RQGGVRFTVAG 168          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 5.721e-34
Identity = 66/131 (50.38%), Postives = 85/131 (64.89%), Query Frame = 2
Query:   98 INARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            ++  ATFY              YGNLYS GYGTNTAALS+ALFN+G +CG CY+I C  ++ KWC  GT + +TATN C          GGWCNPP+QHFD++QP ++ I  YR G+VPV ++RV C +KG
Sbjct:   25 LSGTATFYGGSDASGTMGGACGYGNLYSTGYGTNTAALSSALFNDGAACGECYQITCDQSNSKWCKAGTSVTITATNLCPPDYSKPSNDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKG 155          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 7.472e-34
Identity = 72/148 (48.65%), Postives = 90/148 (60.81%), Query Frame = 2
Query:  101 NARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG--RHQVHNHWPFPTSTL 529
            +A ATFY              YGNLY+ GYG   AALS+ALFN+G  CG+CY I C  +  KWC PG  +I +TATN C          GGWCNPP+QHFD+SQP +++IA Y+AG+VPV YKRVPC + G  R  +  H  F   T+
Sbjct:   30 SAFATFYGGKDGSGTMGGACGYGNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVTV 177          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.839e-33
Identity = 70/153 (45.75%), Postives = 92/153 (60.13%), Query Frame = 2
Query:   77 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVN----DPKWCLPG----TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG--RHQVHNH 505
            A   G W +A ATFY              YGN Y QGYGT+TAALS  +F +GLSCG+C+E++C      D + CLP     +I+VTAT+ C          GGWCNPP  HFDLSQP F  IA++++G+VPV+Y+RV C +KG  R  ++ H
Sbjct:   24 AAAAGRWTDAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATDLCPANHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGH 176          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.832e-32
Identity = 62/144 (43.06%), Postives = 84/144 (58.33%), Query Frame = 2
Query:   89 GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG----RHQVHNHW 508
            G W  A ATFY              YGNL++ GYG +TAALST LFN+G  CG C++I C   P      + +VTATN C          GGWCNPP+ HFD+++P F  +A +RAG++PV Y+RVPC + G    + Q +++W
Sbjct:   35 GPWRYAHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKSTVVTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYW 178          

HSP 2 Score: 24.2534 bits (51), Expect = 1.832e-32
Identity = 9/20 (45.00%), Postives = 14/20 (70.00%), Query Frame = 1
Query:  514 SYFHPMLITNVGGAGDVHGL 573
            SY+  + + NVGGAGD+  +
Sbjct:  176 SYWLLIFVMNVGGAGDIKSM 195          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 2.658e-31
Identity = 62/134 (46.27%), Postives = 80/134 (59.70%), Query Frame = 2
Query:   92 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            GW    ATFY              YGNLY+ GYGTNTAALS+ LFN+G SCG CY I C     P+WC  G  + +TATN C          GGWCNPP+ HFD+++P +  I  Y+AG++PV Y++V C ++G
Sbjct:   26 GWNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAGAAVTITATNLCPPNWALPSNSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQG 159          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.658e-31
Identity = 64/135 (47.41%), Postives = 81/135 (60.00%), Query Frame = 2
Query:   86 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            G  W  A ATFY              YGN+Y  GYG  T ALSTALFN G +CG C+++KCV+ P  C  G+   +VTATN C          GGWCNPP+ HFDL++P F  IA ++AG++PV+Y+RV C K G
Sbjct:   28 GTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVSSPN-CYYGSPATVVTATNICPPNYGQASNNGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIG 161          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.471e-31
Identity = 66/134 (49.25%), Postives = 81/134 (60.45%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGG--WCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            W  A ATFY              YGNLY+ GYGT+TAALST LF +G  CG+CY+++CV     C  G+  I VTATN C          GG  WCNPP+ HFDLS+P F  +A +RAG+VPV Y+RVPC + G
Sbjct:   37 WTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTAS-CYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAG 169          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.140e-30
Identity = 66/134 (49.25%), Postives = 77/134 (57.46%), Query Frame = 2
Query:   92 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            GW+   ATFY              YGNLY QGYG N AALST LFNNG SCG CY I C  D  P  C  GT I VT TNFC          GGWCN  + HFD+SQP +++I  Y AG+VP+ Y++V C + G
Sbjct:   22 GWLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGTAITVTGTNFC--PPNYDLPYGGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSG 153          

HSP 2 Score: 25.0238 bits (53), Expect = 1.140e-30
Identity = 13/40 (32.50%), Postives = 21/40 (52.50%), Query Frame = 1
Query:  511 ISYFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630
            ++YF  +L+TN+ G+G +  +   KG   G       NWG
Sbjct:  162 LNYFELVLVTNMAGSGSIASM-SVKGSSTG-WIQMSRNWG 199          

HSP 3 Score: 20.4014 bits (41), Expect = 1.140e-30
Identity = 7/11 (63.64%), Postives = 9/11 (81.82%), Query Frame = 3
Query:  477 KRGGIRFTIIG 509
            + GG+RFTI G
Sbjct:  151 RSGGVRFTITG 161          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 1.633e-30
Identity = 61/131 (46.56%), Postives = 79/131 (60.31%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            W +A+A++Y              +G+L   GYG  T  LSTALF  G +CG CYE+KCV+D K+CLPGT I+VTATNFC          GG CNPP  HF L    F+ IA ++AGV+P+ Y+RV C + G
Sbjct:   33 WRSAKASYYAADPEDAIGGACG-FGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVDDLKYCLPGTSIVVTATNFCAPNFGLPADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDG 162          

HSP 2 Score: 32.7278 bits (73), Expect = 1.633e-30
Identity = 19/39 (48.72%), Postives = 26/39 (66.67%), Query Frame = 1
Query:  514 SYFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630
            S+F  +LI+NVGGAGDV  +   KG + G  + G+ NWG
Sbjct:  172 SFFLTVLISNVGGAGDVRSV-KIKGTESGWLSMGR-NWG 208          
The following BLAST results are available for this feature:
BLAST of EY675039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
EXP31_ORYSJ4.445e-3450.38Expansin-A31 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP12_ORYSJ5.721e-3450.38Expansin-A12 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA3_ORYSJ7.472e-3448.65Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP21_ORYSJ2.839e-3345.75Expansin-A21 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA7_ARATH1.832e-3243.06Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 ... [more]
EXP25_ORYSJ2.658e-3146.27Expansin-A25 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP18_ARATH2.658e-3147.41Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=... [more]
EXP30_ORYSJ3.471e-3149.25Putative expansin-A30 OS=Oryza sativa subsp. japon... [more]
EXP18_ORYSJ1.140e-3049.25Expansin-A18 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP10_ORYSJ1.633e-3046.56Expansin-A10 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-B08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675039 ID=EY675039; Name=EY675039; organism=Citrus sinensis; type=EST; length=1015bp
GCTTCCATTTCTCCACAAAATGTATTTTGCTGGGTTTTTCTCGTTGGGTT
TCCTTGCATTGGTGTCCTCCGTTCATGCTAATGGAGGCGGTGGGTGGATC
AATGCTCGTGCCACTTTCTATGGTGGTGGCGATGCTTCAGGGACTATGGG
TGGGGCTTGTGGCTATGGGAATCTGTATAGCCAGGGTTATGGAACGAACA
CTGCAGCCTTGAGCACGGCTTTGTTCAACAACGGTTTGAGCTGTGGGTCT
TGCTATGAGATTAAGTGTGTTAATGACCCCAAATGGTGCTTGCCCGGCAC
CATTATGGTCACAGCTACCAATTTTTGCCCACCGAACAACGCCCTCCCCA
ACAATGCAGGCGGTTGGTGCAATCCTCCGCAGCAACATTTTGATCTCTCT
CAGCCTGTGTTCCAACACATTGCTCAATACAGAGCTGGAGTTGTCCCTGT
AACTTACAAGAGGGTACCCTGCGGAAAAAAGGGGAGGCATCAGGTTCACA
ATCATTGGCCATTTCCTACTTCCACCCTATGTTGATCACCAACGTTGGTG
GTGCTGGTGATGTTCATGGCCTGTTTCCATCCAAAGGTCCTAAAATTGGG
CTGGGAACCCCTGGTCAAGAAAACTGGGGGCCAAAAACCGGGCAAACCAA
CACTTATTCTCAATGGGCCCAAAGGCCGGTTCTTTTAAAGGGCCACCCCA
AGCCAAGGCCCCCCCTTTGTGAACTTTCCCATCAAATGTTTGGCCCCCGG
CCTAACCGGGTCCTTTTGGCCAAAAATTTACCTCCGGGGGCTCCATTTTC
CCCCTTAAAACCCCCCCAAAAAACCAATAAAAAAAATTGGGGGTTTTTAT
AAACCCCTTTTTTTTTAACCACAAAAAAATTTGCGGTGGTCATAAAAGAT
TGAAAAATATTTTTTTTTGATAATAAAAAAAAAATTTTTTTTCCACCCCC
ACCTAAAGGGGAGGGGTTAATTTTAAATAATATTTTATTTTAAAATATAA
TAAAATAATATAATA
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