EY675039
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 1.036e-29 Identity = 58/131 (44.27%), Postives = 77/131 (58.78%), Query Frame = 2 Query: 95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484 W ARAT+Y YG+L GYG T LS LF G CG+C+E++CV+D +WC+PGT I++TATNFC GG CNPP +HF L F+ IA ++AG +PV Y+R+ C K+G Sbjct: 40 WRPARATYYAATNPRDAVGGACGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVDDLRWCIPGTSIILTATNFCAPNYGFDPDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEG 170 HSP 2 Score: 28.1054 bits (61), Expect = 1.036e-29 Identity = 20/58 (34.48%), Postives = 29/58 (50.00%), Query Frame = 1 Query: 457 QEGTLRKKGEASGSQSLAISYFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630 +EG++R + G F +LITNV G+GD+ + KG + G P NWG Sbjct: 168 KEGSMRFTVDGGG-------IFISVLITNVAGSGDIAAV-KIKGSRTG-WLPMGRNWG 216
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 5.431e-28 Identity = 61/133 (45.86%), Postives = 75/133 (56.39%), Query Frame = 2 Query: 95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484 W+ ATFY YGNLY QGYG N AALST LFN+G SCG CY I C P WC G I VT TN+C GGWCN + HFD+SQP +++I Y AG++P+ Y++V C + G Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGKAITVTGTNYC--PPNYDLPYGGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYG 153 HSP 2 Score: 22.7126 bits (47), Expect = 5.431e-28 Identity = 7/17 (41.18%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 514 SYFHPMLITNVGGAGDV 564 +YF +L+TN+ G+G + Sbjct: 163 NYFELVLVTNMAGSGSI 179
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.013e-28 Identity = 62/135 (45.93%), Postives = 77/135 (57.04%), Query Frame = 2 Query: 92 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQY-RAGVVPVTYKRVPCGKKG 484 GWI A AT+Y Y N Y G+G +TAALS LF +G SCG CY+++C DPKWCL G + VTATNFC GWCN P+ HFD+S P F IA+ G+VPV Y+RV C ++G Sbjct: 26 GWIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRGAAVTVTATNFC-----PTNNNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRG 155 HSP 2 Score: 24.2534 bits (51), Expect = 6.013e-28 Identity = 13/37 (35.14%), Postives = 19/37 (51.35%), Query Frame = 1 Query: 520 FHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630 F+ ++I+NVGG G V + +G K NWG Sbjct: 167 FNMVMISNVGGGGSVRSV-AVRGSKGKTWLQMTRNWG 202 HSP 3 Score: 21.1718 bits (43), Expect = 6.013e-28 Identity = 7/12 (58.33%), Postives = 11/12 (91.67%), Query Frame = 3 Query: 474 EKRGGIRFTIIG 509 ++RGG+RFT+ G Sbjct: 152 KRRGGVRFTMRG 163
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 124.02 bits (310), Expect = 1.365e-27 Identity = 63/131 (48.09%), Postives = 78/131 (59.54%), Query Frame = 2 Query: 95 WINARATFYXXXXXXXXXXXXXX-YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484 W +ARA +Y YG+L GYG TAALSTALFN+G SCG+CYEI C +P+ CL G+I +TAT+ C WC P +HFDLS P+F IAQ +A +VPV Y+RVPC K G Sbjct: 45 WYDARAAYYGDIHGGGTELEGACGYGDLNKHGYGLATAALSTALFNSGASCGACYEIMCSPNPQGCLSGSIKITATDLC-------PPGSAWCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTG 168
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 1.555e-27 Identity = 52/101 (51.49%), Postives = 66/101 (65.35%), Query Frame = 2 Query: 188 YGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484 Y T TAALST LF +G CG CYE++CV P WC PG+ +++T TN C GGWCNPP+ HFD++ P F +AQ AG+VPV Y+RVPC + G Sbjct: 85 YSTKTAALSTPLFADGNGCGQCYELRCVKSP-WCNPGSPSVVITGTNLCPPNWYLPNDDGGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTG 184 HSP 2 Score: 27.7202 bits (60), Expect = 1.555e-27 Identity = 14/38 (36.84%), Postives = 17/38 (44.74%), Query Frame = 1 Query: 517 YFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630 Y+ + + NVGGAGDV L G NWG Sbjct: 195 YWLLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWG 232
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 3.964e-25 Identity = 59/133 (44.36%), Postives = 73/133 (54.89%), Query Frame = 2 Query: 95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484 W+ ATFY YGNLY Q YG N AALST LFN+G SCG CY I C P WC G I VT TN+ GGWCN + +FD+SQP +++I Y AG+VP+ Y++V C + G Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQRYGINNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGKAITVTGTNY-----------GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYG 144 HSP 2 Score: 22.7126 bits (47), Expect = 3.964e-25 Identity = 7/17 (41.18%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 514 SYFHPMLITNVGGAGDV 564 +YF +L+TN+ G+G + Sbjct: 154 NYFELVLVTNMAGSGSI 170
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 8.724e-25 Identity = 49/109 (44.95%), Postives = 70/109 (64.22%), Query Frame = 2 Query: 164 YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484 YG+L + +A LS LFN G SCG+C E++CVN +WCL G+ ++VTAT+FC GGWCN P++H +LS F IA+ RA ++P+ Y+RV CG++G Sbjct: 53 YGDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSVVVTATDFCPPNSGLSSDYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRG 161 HSP 2 Score: 23.483 bits (49), Expect = 8.724e-25 Identity = 16/39 (41.03%), Postives = 21/39 (53.85%), Query Frame = 1 Query: 514 SYFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630 S+F +LI+NVG G+V G+ KG P NWG Sbjct: 171 SHFFQVLISNVGLDGEVVGV-KVKGHTTA-WIPMARNWG 207
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 5.367e-24 Identity = 50/109 (45.87%), Postives = 70/109 (64.22%), Query Frame = 2 Query: 164 YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484 YG+L YG TA +S ALF G +CG CYE++CVN WCL G T++VTAT+FC GGWCN P++HF++S+ F +A+ +A +VPV ++RV C + G Sbjct: 57 YGDLDIFRYGRYTAGVSGALFGRGSACGGCYEVRCVNHVLWCLRGSPTVVVTATDFCAPNLGLSDDYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAG 165
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.787e-18 Identity = 51/141 (36.17%), Postives = 70/141 (49.65%), Query Frame = 2 Query: 74 HANGG----GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484 H N G G W++ ATFY G + GYG TAA+S ALF+NG CG+CYE+K + T++VTATN +HFDL+ P F IA+ + GVVPV+Y++V C ++G Sbjct: 71 HVNHGRYKCGPWVDGHATFYGGRDASGTTEGGAC-GYKDADGYGAMTAAVSPALFDNGAGCGACYELKGDSGK------TVVVTATNQAPPPVNGMKG---------EHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQG 195 HSP 2 Score: 31.187 bits (69), Expect = 4.787e-18 Identity = 17/37 (45.95%), Postives = 23/37 (62.16%), Query Frame = 1 Query: 520 FHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630 ++ +++ NVGGAGDV L KG K TP Q +WG Sbjct: 207 YNMVMVKNVGGAGDVVKL-TVKGTKRVKWTPLQRSWG 242
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXPB7_ORYSJ (Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXPB7 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.339e-11 Identity = 45/144 (31.25%), Postives = 65/144 (45.14%), Query Frame = 2 Query: 83 GGGGWINARATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWC-LPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVTYKRVPCGKKG 484 GGGGW+NARAT+Y G N+ + T+ + LF +G CGSCY+I+CV P LP T+++T N+ HFDLS F +A+ AG++ + ++RVPC G Sbjct: 88 GGGGWLNARATWYGAPNGAGPDDNGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRCVGHPACSGLPETVIITDMNYYPVSL--------------YHFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRRVPCQYPG 217 The following BLAST results are available for this feature:
BLAST of EY675039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675039 ID=EY675039; Name=EY675039; organism=Citrus sinensis; type=EST; length=1015bpback to top |