EY675039

Overview
NameEY675039
Unique NameEY675039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1015
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 1.036e-29
Identity = 58/131 (44.27%), Postives = 77/131 (58.78%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            W  ARAT+Y              YG+L   GYG  T  LS  LF  G  CG+C+E++CV+D +WC+PGT I++TATNFC          GG CNPP +HF L    F+ IA ++AG +PV Y+R+ C K+G
Sbjct:   40 WRPARATYYAATNPRDAVGGACGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVDDLRWCIPGTSIILTATNFCAPNYGFDPDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEG 170          

HSP 2 Score: 28.1054 bits (61), Expect = 1.036e-29
Identity = 20/58 (34.48%), Postives = 29/58 (50.00%), Query Frame = 1
Query:  457 QEGTLRKKGEASGSQSLAISYFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630
            +EG++R   +  G        F  +LITNV G+GD+  +   KG + G   P   NWG
Sbjct:  168 KEGSMRFTVDGGG-------IFISVLITNVAGSGDIAAV-KIKGSRTG-WLPMGRNWG 216          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 5.431e-28
Identity = 61/133 (45.86%), Postives = 75/133 (56.39%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            W+   ATFY              YGNLY QGYG N AALST LFN+G SCG CY I C     P WC  G  I VT TN+C          GGWCN  + HFD+SQP +++I  Y AG++P+ Y++V C + G
Sbjct:   23 WLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGKAITVTGTNYC--PPNYDLPYGGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYG 153          

HSP 2 Score: 22.7126 bits (47), Expect = 5.431e-28
Identity = 7/17 (41.18%), Postives = 13/17 (76.47%), Query Frame = 1
Query:  514 SYFHPMLITNVGGAGDV 564
            +YF  +L+TN+ G+G +
Sbjct:  163 NYFELVLVTNMAGSGSI 179          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.013e-28
Identity = 62/135 (45.93%), Postives = 77/135 (57.04%), Query Frame = 2
Query:   92 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQY-RAGVVPVTYKRVPCGKKG 484
            GWI A AT+Y              Y N Y  G+G +TAALS  LF +G SCG CY+++C    DPKWCL G  + VTATNFC           GWCN P+ HFD+S P F  IA+    G+VPV Y+RV C ++G
Sbjct:   26 GWIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRGAAVTVTATNFC-----PTNNNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRG 155          

HSP 2 Score: 24.2534 bits (51), Expect = 6.013e-28
Identity = 13/37 (35.14%), Postives = 19/37 (51.35%), Query Frame = 1
Query:  520 FHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630
            F+ ++I+NVGG G V  +   +G K         NWG
Sbjct:  167 FNMVMISNVGGGGSVRSV-AVRGSKGKTWLQMTRNWG 202          

HSP 3 Score: 21.1718 bits (43), Expect = 6.013e-28
Identity = 7/12 (58.33%), Postives = 11/12 (91.67%), Query Frame = 3
Query:  474 EKRGGIRFTIIG 509
            ++RGG+RFT+ G
Sbjct:  152 KRRGGVRFTMRG 163          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3)

HSP 1 Score: 124.02 bits (310), Expect = 1.365e-27
Identity = 63/131 (48.09%), Postives = 78/131 (59.54%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXX-YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            W +ARA +Y               YG+L   GYG  TAALSTALFN+G SCG+CYEI C  +P+ CL G+I +TAT+ C            WC  P +HFDLS P+F  IAQ +A +VPV Y+RVPC K G
Sbjct:   45 WYDARAAYYGDIHGGGTELEGACGYGDLNKHGYGLATAALSTALFNSGASCGACYEIMCSPNPQGCLSGSIKITATDLC-------PPGSAWCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTG 168          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.555e-27
Identity = 52/101 (51.49%), Postives = 66/101 (65.35%), Query Frame = 2
Query:  188 YGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            Y T TAALST LF +G  CG CYE++CV  P WC PG+  +++T TN C          GGWCNPP+ HFD++ P F  +AQ  AG+VPV Y+RVPC + G
Sbjct:   85 YSTKTAALSTPLFADGNGCGQCYELRCVKSP-WCNPGSPSVVITGTNLCPPNWYLPNDDGGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTG 184          

HSP 2 Score: 27.7202 bits (60), Expect = 1.555e-27
Identity = 14/38 (36.84%), Postives = 17/38 (44.74%), Query Frame = 1
Query:  517 YFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630
            Y+  + + NVGGAGDV  L        G       NWG
Sbjct:  195 YWLLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWG 232          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 3.964e-25
Identity = 59/133 (44.36%), Postives = 73/133 (54.89%), Query Frame = 2
Query:   95 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            W+   ATFY              YGNLY Q YG N AALST LFN+G SCG CY I C     P WC  G  I VT TN+           GGWCN  + +FD+SQP +++I  Y AG+VP+ Y++V C + G
Sbjct:   23 WLPGTATFYGGADGSGTMGGACGYGNLYDQRYGINNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGKAITVTGTNY-----------GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYG 144          

HSP 2 Score: 22.7126 bits (47), Expect = 3.964e-25
Identity = 7/17 (41.18%), Postives = 13/17 (76.47%), Query Frame = 1
Query:  514 SYFHPMLITNVGGAGDV 564
            +YF  +L+TN+ G+G +
Sbjct:  154 NYFELVLVTNMAGSGSI 170          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 8.724e-25
Identity = 49/109 (44.95%), Postives = 70/109 (64.22%), Query Frame = 2
Query:  164 YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            YG+L    +   +A LS  LFN G SCG+C E++CVN  +WCL G+  ++VTAT+FC          GGWCN P++H +LS   F  IA+ RA ++P+ Y+RV CG++G
Sbjct:   53 YGDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSVVVTATDFCPPNSGLSSDYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRG 161          

HSP 2 Score: 23.483 bits (49), Expect = 8.724e-25
Identity = 16/39 (41.03%), Postives = 21/39 (53.85%), Query Frame = 1
Query:  514 SYFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630
            S+F  +LI+NVG  G+V G+   KG       P   NWG
Sbjct:  171 SHFFQVLISNVGLDGEVVGV-KVKGHTTA-WIPMARNWG 207          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 5.367e-24
Identity = 50/109 (45.87%), Postives = 70/109 (64.22%), Query Frame = 2
Query:  164 YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            YG+L    YG  TA +S ALF  G +CG CYE++CVN   WCL G  T++VTAT+FC          GGWCN P++HF++S+  F  +A+ +A +VPV ++RV C + G
Sbjct:   57 YGDLDIFRYGRYTAGVSGALFGRGSACGGCYEVRCVNHVLWCLRGSPTVVVTATDFCAPNLGLSDDYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAG 165          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.787e-18
Identity = 51/141 (36.17%), Postives = 70/141 (49.65%), Query Frame = 2
Query:   74 HANGG----GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            H N G    G W++  ATFY               G   + GYG  TAA+S ALF+NG  CG+CYE+K  +        T++VTATN                    +HFDL+ P F  IA+ + GVVPV+Y++V C ++G
Sbjct:   71 HVNHGRYKCGPWVDGHATFYGGRDASGTTEGGAC-GYKDADGYGAMTAAVSPALFDNGAGCGACYELKGDSGK------TVVVTATNQAPPPVNGMKG---------EHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQG 195          

HSP 2 Score: 31.187 bits (69), Expect = 4.787e-18
Identity = 17/37 (45.95%), Postives = 23/37 (62.16%), Query Frame = 1
Query:  520 FHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630
            ++ +++ NVGGAGDV  L   KG K    TP Q +WG
Sbjct:  207 YNMVMVKNVGGAGDVVKL-TVKGTKRVKWTPLQRSWG 242          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXPB7_ORYSJ (Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXPB7 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.339e-11
Identity = 45/144 (31.25%), Postives = 65/144 (45.14%), Query Frame = 2
Query:   83 GGGGWINARATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWC-LPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVTYKRVPCGKKG 484
            GGGGW+NARAT+Y               G  N+    +   T+  +  LF +G  CGSCY+I+CV  P    LP T+++T  N+                    HFDLS   F  +A+         AG++ + ++RVPC   G
Sbjct:   88 GGGGWLNARATWYGAPNGAGPDDNGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRCVGHPACSGLPETVIITDMNYYPVSL--------------YHFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRRVPCQYPG 217          
The following BLAST results are available for this feature:
BLAST of EY675039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
EXP13_ARATH1.036e-2944.27Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=... [more]
EXP19_ORYSJ5.431e-2845.86Expansin-A19 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP12_ARATH6.013e-2845.93Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=... [more]
EXP21_ARATH1.365e-2748.09Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=... [more]
EXP17_ORYSJ1.555e-2751.49Expansin-A17 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP20_ORYSJ3.964e-2544.36Expansin-A20 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP20_ARATH8.724e-2544.95Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=... [more]
EXP16_ORYSJ5.367e-2445.87Expansin-A16 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP26_ORYSJ4.787e-1836.17Expansin-A26 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPB7_ORYSJ2.339e-1131.25Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXP... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-B08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675039 ID=EY675039; Name=EY675039; organism=Citrus sinensis; type=EST; length=1015bp
GCTTCCATTTCTCCACAAAATGTATTTTGCTGGGTTTTTCTCGTTGGGTT
TCCTTGCATTGGTGTCCTCCGTTCATGCTAATGGAGGCGGTGGGTGGATC
AATGCTCGTGCCACTTTCTATGGTGGTGGCGATGCTTCAGGGACTATGGG
TGGGGCTTGTGGCTATGGGAATCTGTATAGCCAGGGTTATGGAACGAACA
CTGCAGCCTTGAGCACGGCTTTGTTCAACAACGGTTTGAGCTGTGGGTCT
TGCTATGAGATTAAGTGTGTTAATGACCCCAAATGGTGCTTGCCCGGCAC
CATTATGGTCACAGCTACCAATTTTTGCCCACCGAACAACGCCCTCCCCA
ACAATGCAGGCGGTTGGTGCAATCCTCCGCAGCAACATTTTGATCTCTCT
CAGCCTGTGTTCCAACACATTGCTCAATACAGAGCTGGAGTTGTCCCTGT
AACTTACAAGAGGGTACCCTGCGGAAAAAAGGGGAGGCATCAGGTTCACA
ATCATTGGCCATTTCCTACTTCCACCCTATGTTGATCACCAACGTTGGTG
GTGCTGGTGATGTTCATGGCCTGTTTCCATCCAAAGGTCCTAAAATTGGG
CTGGGAACCCCTGGTCAAGAAAACTGGGGGCCAAAAACCGGGCAAACCAA
CACTTATTCTCAATGGGCCCAAAGGCCGGTTCTTTTAAAGGGCCACCCCA
AGCCAAGGCCCCCCCTTTGTGAACTTTCCCATCAAATGTTTGGCCCCCGG
CCTAACCGGGTCCTTTTGGCCAAAAATTTACCTCCGGGGGCTCCATTTTC
CCCCTTAAAACCCCCCCAAAAAACCAATAAAAAAAATTGGGGGTTTTTAT
AAACCCCTTTTTTTTTAACCACAAAAAAATTTGCGGTGGTCATAAAAGAT
TGAAAAATATTTTTTTTTGATAATAAAAAAAAAATTTTTTTTCCACCCCC
ACCTAAAGGGGAGGGGTTAATTTTAAATAATATTTTATTTTAAAATATAA
TAAAATAATATAATA
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