EY675035

Overview
NameEY675035
Unique NameEY675035
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length984
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_OSHV1 (Ribonucleoside-diphosphate reductase large subunit OS=Ostreid herpesvirus 1 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.783e-22
Identity = 61/196 (31.12%), Postives = 94/196 (47.96%), Query Frame = 1
Query:   40 DFEKLAEVTAIVTENLNKIIDVNYYPVETARR----------------------------SNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYH--NSPVSKGILQPDMWNVIPSDR------WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYT 519
            DFE +A+   +  + +N +ID   Y +   +                             SNL+HRP GIG+QGL D F+ L + ++S  A +L   I E IYY A++ S +IA ++GPY +Y+  N+   +G LQ D       DR      ++W  +     K G+ NS++ A  P+AS+SQ+  N E  E  T
Sbjct:  483 DFEGIADAAGVACKGINNLIDKQNYDLGNEQLMRLADERTEEVVEVNGIKFDAKYNLVSYSNLKHRPQGIGMQGLHDVFMKLKIPYDSEMAFRLAALIQEAIYYGAVRESVKIAEEKGPYPSYYWDNNTHREGKLQFDFLEGFDRDRDLTHELFNWREVLKKFEKFGINNSVVTAQPPSASSSQLNDNVESIEAIT 678          

HSP 2 Score: 39.2762 bits (90), Expect = 2.783e-22
Identity = 18/53 (33.96%), Postives = 29/53 (54.72%), Query Frame = 3
Query:  543 VLSGEFVVMNKHLPHDLTERGIWPPTIKKKK*NMKGSVQKIPEIPEGIKNELK 701
            +  G+F+++NKHL  DL + G+W   +        GS+Q I  IP+ I+   K
Sbjct:  686 IKDGKFIIINKHLQKDLEDLGMWDAQMVGDIEANDGSIQNIERIPKNIREIYK 738          
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_SHV21 (Ribonucleoside-diphosphate reductase large subunit OS=Saimiriine herpesvirus 2 (strain 11) GN=61 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.915e-20
Identity = 63/164 (38.41%), Postives = 88/164 (53.66%), Query Frame = 1
Query:   37 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAA--KEGPYETYHNSPVSKGILQPDMWNVIPS--DRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 516
            FDF KL          +N  I ++  P  +A     R R +GIG  GLAD F  +G  +   E++ L++DIFET+YY A+KTSSEI +  K  P+  +  S ++ G+     W+ +P       W  L+D I K GV NS  +A MPTA TSQ+ G  + F PY
Sbjct:  434 FDFSKLEYAVQAAVFIINACI-LSPSPTSSATVGQ-RERSMGIGCHGLADVFSEMGYGYLDLESECLDRDIFETMYYTAVKTSSEICSVGKGQPFAGFRKSKLAHGVFHWATWDAMPQRVPMKQWIHLQDNIKKFGVFNSQFIALMPTAGTSQLTGYTDSFYPY 595          
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_EHV4 (Ribonucleoside-diphosphate reductase large subunit OS=Equine herpesvirus 4 (strain 1942) PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.721e-19
Identity = 59/163 (36.20%), Postives = 94/163 (57.67%), Query Frame = 1
Query:   34 FFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEG--PYETYHNSPVSKGILQPDMW-NVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 513
            +FDF  L    A  T  +N ++  + YP   +++    +R +G+G+QGL  TF++L +   SPEA QLNK I E +  +++K S+ +  K G  P++ + +S  S+G L  D + NV  ++R  W  LR  I + G+ NS  VA MPT S+SQ+  ++E F P
Sbjct:  475 YFDFAALGRAAATATIFVNAMMCASTYPTVKSQKGVEENRSLGLGIQGLHTTFLMLDLDMASPEAHQLNKQIAERLLLNSMKASATL-CKLGMQPFKGFEDSKYSRGELPFDAYPNVTLTNRNAWRRLRTDIKQYGLYNSQFVAYMPTVSSSQVTESSEGFSP 636          
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_HELPY (Ribonucleoside-diphosphate reductase subunit alpha OS=Helicobacter pylori GN=nrdA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.936e-19
Identity = 56/165 (33.94%), Postives = 88/165 (53.33%), Query Frame = 1
Query:   46 EKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN---------VIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 513
            E +  V  I+   L+ +ID+N+YP    + +NL++R IG+GV G A       +A+ S E  +    + E I YHA+ TS+ +A ++G Y+ + NS  SKGI   D  N          + +   DW  LR+ +  NG+RN  L+A  PT+S S ++G  +  EP
Sbjct:  511 EDIKRVVPIMVRLLDNVIDLNFYPNRKVKATNLQNRAIGLGVMGEAQMLAEHQIAWGSKEHLEKIDALMEQISYHAIDTSANLAKEKGVYKDFENSEWSKGIFPIDKANNEALKLTEKGLFNHACDWQGLREKVKANGMRNGYLMAIAPTSSISILVGTTQTIEP 675          
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_HELPJ (Ribonucleoside-diphosphate reductase subunit alpha OS=Helicobacter pylori J99 GN=nrdA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.936e-19
Identity = 56/165 (33.94%), Postives = 88/165 (53.33%), Query Frame = 1
Query:   46 EKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN---------VIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 513
            E +  V  I+   L+ +ID+N+YP    + +NL++R IG+GV G A       +A+ S E  +    + E I YHA+ TS+ +A ++G Y+ + NS  SKGI   D  N          + +   DW  LR+ +  NG+RN  L+A  PT+S S ++G  +  EP
Sbjct:  511 EDIKRVVPIMVRLLDNVIDLNFYPNRKVKATNLQNRAIGLGVMGEAQMLAEHQIAWGSKEHLEKIDALMEQISYHAIDTSANLAKEKGVYKDFENSEWSKGIFPIDKANNEALKLTEKGLFNHACDWQGLREKVKANGMRNGYLMAIAPTSSISILVGTTQTIEP 675          
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_EHV1B (Ribonucleoside-diphosphate reductase large subunit OS=Equine herpesvirus 1 (strain Ab4p) GN=21 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.903e-18
Identity = 56/162 (34.57%), Postives = 90/162 (55.56%), Query Frame = 1
Query:   34 FFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIA-AKEGPYETYHNSPVSKGILQPDMW-NVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 513
            +FDF  L    A  T  +N ++    YP   ++R    +R +G+G+QGL   F++L +   SPEA+QLNK I E +  +++K S+ +      P++ + +S  S G L  D +  V  ++R  W  LR  I ++G+ NS  VA MPT S+SQ+  ++E F P
Sbjct:  476 YFDFAALGRAAATATIFVNSMMRAGTYPTVKSQRGVDENRSLGLGIQGLHTAFLMLDLDMASPEARQLNKQIAERLLLNSMKASATLCRLGMKPFKGFEDSKYSLGELPFDSYPGVTLANRNAWRRLRTEIKQHGLYNSQFVAYMPTVSSSQVTESSEGFSP 637          
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_AQUAE (Ribonucleoside-diphosphate reductase subunit alpha OS=Aquifex aeolicus GN=nrdA PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.903e-18
Identity = 57/162 (35.19%), Postives = 86/162 (53.09%), Query Frame = 1
Query:   46 EKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIP------SDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 513
            E++ EV  ++   L+ +I++N+Y +  A  +N R+R IGIGV       +  G+ +ES E  +    +FE I ++ALK S E+A + G Y+ +  S  SKGIL       I        +   W  L + I K G+RN+ L+A MPT STS ILG     +P
Sbjct:  535 EEIKEVLPLLVRMLDNVIEMNFYAIPEAEYTNKRYRAIGIGVSNYHYCLVKNGIKWESEEHLKFADKLFELIAFYALKGSLELAKERGRYKLFDGSNWSKGILFGRSVEEIEENSRQNGNNLPWRELAEEIKKYGIRNAYLLALMPTGSTSLILGATPSIDP 696          
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_BHV1C (Ribonucleoside-diphosphate reductase large subunit OS=Bovine herpesvirus 1.1 (strain Cooper) GN=UL39 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.589e-17
Identity = 55/161 (34.16%), Postives = 86/161 (53.42%), Query Frame = 1
Query:   37 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKE-GPYETYHNSPVSKGILQPDMW-NVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 513
            FDF  L+   A     +N ++    YP E A R   RHR +GIG QGL    + LGM   SP A++LN +I E +    + TS+ +      P+E +  S  ++G++  D +  V+ S    W  LR+ ++++G+ N+  VA MPT S+SQ+   +E F P
Sbjct:  474 FDFAALSTAAATAAIFVNAMMLGGQYPTEKAARGVARHRSLGIGFQGLHTLLLELGMDMLSPAARRLNVEIAERLLLAVMATSATLCEYGCAPFEDFARSKFARGLMPFDGYEGVVLSLPRAWARLREKVARHGLYNAQFVALMPTVSSSQVTEGSEGFSP 634          
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_HAEIN (Ribonucleoside-diphosphate reductase subunit alpha OS=Haemophilus influenzae GN=nrdA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.781e-16
Identity = 53/164 (32.32%), Postives = 82/164 (50.00%), Query Frame = 1
Query:   40 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD------RWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 513
            + ++L E+  +   +L+ ++D   YPV  A+RS+L  R +GIGV   A      G+ +    A  L    FE I Y+ LK S  +A ++G  E ++ +  +KGIL  D +             +DW  LR  I + G+RNS L A MP+ ++SQI       EP
Sbjct:  474 NLDELEELADLAVRSLDALLDYQDYPVVAAKRSSLARRSLGIGVINYAYYLAKNGVRYSDGSANDLTHRTFEAIQYYLLKASMNLAKEQGACEYFNETTYAKGILPIDTYKKDLDSLTQEPLHYDWESLRKDIQEFGLRNSTLTALMPSETSSQISNATNGIEP 637          
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_ECOLI (Ribonucleoside-diphosphate reductase 1 subunit alpha OS=Escherichia coli (strain K12) GN=nrdA PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.781e-16
Identity = 51/164 (31.10%), Postives = 84/164 (51.22%), Query Frame = 1
Query:   40 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMW----NVIPSD--RWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 513
            + ++L E+  +    L+ ++D   YP+  A+R  +  R +GIGV   A      G  +    A  L    FE I Y+ LK S+E+A ++G    ++ +  +KGIL  D +    + I ++   +DW  LR+ I  +G+RNS L A MP+ ++SQI       EP
Sbjct:  474 NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEP 637          
The following BLAST results are available for this feature:
BLAST of EY675035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
RIR1_OSHV12.783e-2231.12Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_SHV215.915e-2038.41Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_EHV41.721e-1936.20Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_HELPY2.936e-1933.94Ribonucleoside-diphosphate reductase subunit alpha... [more]
RIR1_HELPJ2.936e-1933.94Ribonucleoside-diphosphate reductase subunit alpha... [more]
RIR1_EHV1B1.903e-1834.57Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_AQUAE1.903e-1835.19Ribonucleoside-diphosphate reductase subunit alpha... [more]
RIR1_BHV1C3.589e-1734.16Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_HAEIN1.781e-1632.32Ribonucleoside-diphosphate reductase subunit alpha... [more]
RIR1_ECOLI1.781e-1631.10Ribonucleoside-diphosphate reductase 1 subunit alp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-B03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675035 ID=EY675035; Name=EY675035; organism=Citrus sinensis; type=EST; length=984bp
AGGATTGTTGGGAGCCCAGGTTCTAAAAATAGATTTTTTGACTTTGAAAA
ATTAGCTGAGGTTACTGCAATTGTTACTGAAAACCTTAACAAAATAATTG
ATGTTAATTACTACCCTGTTGAAACTGCCAGAAGGTCAAATTTGCGACAT
AGACCCATCGGTATTGGAGTTCAGGGTCTAGCAGATACCTTCATCTTACT
TGGAATGGCATTTGAATCACCAGAGGCTCAACAGCTGAACAAAGACATAT
TTGAAACCATTTACTACCATGCTCTGAAAACTTCTTCGGAGATAGCTGCA
AAAGAAGGTCCTTATGAAACATATCATAATAGCCCTGTGAGCAAGGGAAT
TCTCCAACCCGACATGTGGAATGTAATTCCATCAGATCGATGGGACTGGG
GAGTACTTAGAGATATGATATCAAAGAATGGAGTGAGAAATTCACTTCTT
GTAGCACCAATGCCAACTGCCTCGACCAGCCAGATTCTCGGAAACAATGA
GTGCTTTGAGCCATATACTTTCTAACATCTACAGGTCGCAAAGTTCTAAG
TGGTGAATTTGTTGTAATGAACAAACATCTTCCTCACGACTTAACTGAAA
GGGGAATTTGGCCTCCCACTATTAAAAAAAAAAAATAAAACATGAAGGGT
TCGGTTCAAAAAATTCCCGAAATCCCTGAAGGAATAAAAAATGAATTAAA
AAAATGGTTTGGGAAAAACAAGCCAAAAGAAGCTGGGTTGAATTGGGTTG
GTTGAAAAAAAGGGGGCTTTATAAACCAAAAATCAAAACCCTTTAAAATT
CCACATTGGGATCACCCCAAATTTTAAAAAAAAGTGGATTTTCTTTTGTT
TTTTCCCGCAAATGGGGGCCAAGGGGGGAAATATGAAAAAAAAGAAAAAA
TGGAACAATATCCCACCGGGGGCCACCGTGGGGCGGGGCCGCCGACGGAA
ACCCCCAACCAAAAATTTTTTTTTAAGTGGAGAA
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