EY675035

Overview
NameEY675035
Unique NameEY675035
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length984
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_HHV11 (Ribonucleoside-diphosphate reductase large subunit OS=Human herpesvirus 1 (strain 17) GN=UL39 PE=3 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 2.326e-16
Identity = 57/164 (34.76%), Postives = 81/164 (49.39%), Query Frame = 1
Query:   37 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEG-PYETYHNSPVSKGILQPDMWNVIPSDR----WDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 513
            FDF +L +        +N +ID    P     R N   R +GIG+QGL    + LG+  ES E Q LNK I E +   A+KTS+ +  +   P+  +  S    G      W   P  R     +W +LR  + K+G+RNS  VA MPTA+++QI   +E F P
Sbjct:  824 FDFGRLRDAVQACVLMVNIMIDSTLQPTPQCTRGNDNLRSMGIGMQGLHTACLKLGLDLESAEFQDLNKHIAEVMLLSAMKTSNALCVRGARPFNHFKRSMYRAGRFH---WERFPDARPRYEGEWEMLRQSMMKHGLRNSQFVALMPTAASAQISDVSEGFAP 984          
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_SALTY (Ribonucleoside-diphosphate reductase 1 subunit alpha OS=Salmonella typhimurium GN=nrdA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.182e-16
Identity = 51/162 (31.48%), Postives = 80/162 (49.38%), Query Frame = 1
Query:   46 EKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN------VIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 513
            ++L E+  +    L+ ++D   YP+  A+R  +  R +GIGV   A      G  +    A  L    FE I Y+ LK S+E+A ++G    ++ +  +KGIL  D +       V     +DW  LR+ I  +G+RNS L A MP+ ++SQI       EP
Sbjct:  476 DELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYWLAKNGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDAIVNEPLHYDWEQLRESIKTHGLRNSTLSALMPSETSSQISNATNGIEP 637          
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_BUCBP (Ribonucleoside-diphosphate reductase subunit alpha OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=nrdA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.839e-16
Identity = 55/171 (32.16%), Postives = 81/171 (47.37%), Query Frame = 1
Query:   19 GSKNRFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD------RWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 513
            GS N   D  KL+    ++   L+ ++D   YP+ +A++S L  R +GIGV   A      G+ +    A  L    FE I YH L  S  +A ++G    + ++   KGIL  D +     +        DW +LR  I K G+RNS L A MP+ ++SQI       EP
Sbjct:  470 GSLNNLNDLSKLSN---LIVRALDSVLDYQEYPILSAKKSALSRRTLGIGVINFAYYLAKNGVRYSDGSANNLTHRTFEAIQYHLLNASCVLAQEKGACHWFSHTNYYKGILPIDTYKKNVDEICNEPLHLDWELLRKKIKKYGLRNSTLSALMPSETSSQISNATNGIEP 637          
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_SUHVK (Ribonucleoside-diphosphate reductase large subunit OS=Suid herpesvirus 1 (strain Kaplan) GN=RR1 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.969e-15
Identity = 50/161 (31.06%), Postives = 83/161 (51.55%), Query Frame = 1
Query:   37 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKE-GPYETYHNSPVSKGILQPDMW-NVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 513
            FDF  L     +    +N ++ +  YP   +     R R +GIG+QGL  T + L M    P A++LN  I E + Y  +  S E+  +   P++ + +S  ++G++  D +  V   +   W  LR  I+++GV N+  VA MPT S+SQ+  ++E F P
Sbjct:  522 FDFAALRRAARVAAVFVNAMMRIGNYPTGASVEGVRRSRSLGIGLQGLHTTVLALDMDMADPAARRLNAAIAEELLYGVMDASVELCERGLRPFDGFEHSRYARGVMPFDAYERVSLREPMRWDALRVRIAEHGVYNAQFVALMPTVSSSQVTESSEGFSP 682          
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_HHV2H (Ribonucleoside-diphosphate reductase large subunit OS=Human herpesvirus 2 (strain HG52) GN=UL39 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.359e-15
Identity = 52/161 (32.30%), Postives = 81/161 (50.31%), Query Frame = 1
Query:   37 FDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEG-PYETYHNSPVSKGILQPDMW-NVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 513
            FDF +L +        +N +ID    P     R N   R +GIG+QGL    + +G+  ES E + LN  I E +   A+KTS+ +  +   P+  +  S    G    + + N  P    +W +LR  + K+G+RNS  +A MPTA+++QI   +E F P
Sbjct:  829 FDFGRLRDAVQACVLMVNIMIDSTLQPTPQCTRGNDNLRSMGIGMQGLHTACLKMGLDLESAEFRDLNTHIAEVMLLAAMKTSNALCVRGARPFSHFKRSMYRAGRFHWERFSNASPRYEGEWEMLRQSMMKHGLRNSQFIALMPTAASAQISDVSEGFAP 989          
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_VZVO (Ribonucleoside-diphosphate reductase large subunit OS=Varicella-zoster virus (strain Oka vaccine) GN=ORF19 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.276e-14
Identity = 53/160 (33.12%), Postives = 81/160 (50.62%), Query Frame = 1
Query:   40 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEG--PYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 513
            D +  A  T I    LN ++    +P + + +    +R +GIG+QGL  T + LG    S  A++LN  I E + Y  +KTS E+    G  P++ +  S  +KG L  D ++ I      W  LRD I   G+ NS  +A MPT S++Q+   +E F P
Sbjct:  466 DLQLTARTTVIF---LNGVLAAGNFPCKKSCKGVKNNRSLGIGIQGLHTTCLRLGFDLTSQPARRLNVQIAELMLYETMKTSMEMCKIGGLAPFKGFTESKYAKGWLHQDGFSTISYLDLPWCTLRDDICAYGLYNSQFLALMPTVSSAQVTECSEGFSP 622          
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_VZVD (Ribonucleoside-diphosphate reductase large subunit OS=Varicella-zoster virus (strain Dumas) GN=ORF19 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.276e-14
Identity = 53/160 (33.12%), Postives = 81/160 (50.62%), Query Frame = 1
Query:   40 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEG--PYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 513
            D +  A  T I    LN ++    +P + + +    +R +GIG+QGL  T + LG    S  A++LN  I E + Y  +KTS E+    G  P++ +  S  +KG L  D ++ I      W  LRD I   G+ NS  +A MPT S++Q+   +E F P
Sbjct:  466 DLQLTARTTVIF---LNGVLAAGNFPCKKSCKGVKNNRSLGIGIQGLHTTCLRLGFDLTSQPARRLNVQIAELMLYETMKTSMEMCKIGGLAPFKGFTESKYAKGWLHQDGFSTISYLDLPWCTLRDDICAYGLYNSQFLALMPTVSSAQVTECSEGFSP 622          
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_HHV23 (Ribonucleoside-diphosphate reductase large subunit OS=Human herpesvirus 2 (strain 333) PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.276e-14
Identity = 52/163 (31.90%), Postives = 81/163 (49.69%), Query Frame = 1
Query:   31 RFFDFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEG-PYETYHNSPVSKGILQPDMW-NVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 513
            R FDF  L +        +N +ID    P     R +   R +GIG+QGL    + +G+  ES E + LN  I E +   A+KTS+ +  +   P+  +  S    G    + + N  P    +W +LR  + K+G+RNS  +A MPTA+++QI   +E F P
Sbjct:  829 RTFDFGMLRDAVQACVLMVNIMIDSTLQPTPQCARGHDNLRSMGIGMQGLHTACLKMGLDLESAEFRDLNTHIAEVMLLAAMKTSNALCVRGARPFSHFKRSMYRAGRFHWERFSNASPRYEGEWEMLRQSMMKHGLRNSQFIALMPTAASAQISDVSEGFAP 991          
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_BPT4 (Ribonucleoside-diphosphate reductase subunit alpha OS=Enterobacteria phage T4 GN=NRDA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.276e-14
Identity = 51/164 (31.10%), Postives = 84/164 (51.22%), Query Frame = 1
Query:   40 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWN------VIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 513
            D +K+ E+  +    L+ ++D   YPV  A ++  R R +G+GV   A        ++E  +A  L  ++FE + Y  +K S ++A ++GP E Y ++  S+G L  D +N        P    DW  LR+ +   G+RNS L A MP  S+SQ+  +   +EP
Sbjct:  471 DQDKINELAEVQVRALDNLLDYQGYPVPEAEKAKKR-RNLGVGVTNYAAWLASNFASYE--DANDLTHELFERLQYGLIKASIKLAKEKGPSEYYSDTRWSRGELPIDWYNKKIDQIAAPKYVCDWSALREDLKLFGIRNSTLSALMPCESSSQVSNSTNGYEP 631          
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_TREPA (Ribonucleoside-diphosphate reductase subunit alpha OS=Treponema pallidum GN=nrdA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 8.273e-14
Identity = 52/158 (32.91%), Postives = 77/158 (48.73%), Query Frame = 1
Query:   40 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 513
            D ++L EV  +    L+ +ID+ YYPV  A+ +N  +R IG+GV G        G+ +ES E       IFE I   A++ S  IA ++G Y  +  S    G        V      DW  L+  ++ +G+RN  L+A  PT+STS I G     +P
Sbjct:  588 DDKELREVVRVAVRALDNVIDLTYYPVPYAQVTNAYYRAIGLGVSGYHHVLAQQGIDWESDEHLAFADRIFERINRAAIEASMTIAREKGAYGCFTGSDWCTGAYFRKRGYVSE----DWQRLQREVATHGMRNGYLLAVAPTSSTSIIAGTTAGVDP 741          
The following BLAST results are available for this feature:
BLAST of EY675035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
RIR1_HHV112.326e-1634.76Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_SALTY5.182e-1631.48Ribonucleoside-diphosphate reductase 1 subunit alp... [more]
RIR1_BUCBP8.839e-1632.16Ribonucleoside-diphosphate reductase subunit alpha... [more]
RIR1_SUHVK1.969e-1531.06Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_HHV2H3.359e-1532.30Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_VZVO1.276e-1433.13Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_VZVD1.276e-1433.13Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_HHV231.276e-1431.90Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_BPT41.276e-1431.10Ribonucleoside-diphosphate reductase subunit alpha... [more]
RIR1_TREPA8.273e-1432.91Ribonucleoside-diphosphate reductase subunit alpha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-B03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675035 ID=EY675035; Name=EY675035; organism=Citrus sinensis; type=EST; length=984bp
AGGATTGTTGGGAGCCCAGGTTCTAAAAATAGATTTTTTGACTTTGAAAA
ATTAGCTGAGGTTACTGCAATTGTTACTGAAAACCTTAACAAAATAATTG
ATGTTAATTACTACCCTGTTGAAACTGCCAGAAGGTCAAATTTGCGACAT
AGACCCATCGGTATTGGAGTTCAGGGTCTAGCAGATACCTTCATCTTACT
TGGAATGGCATTTGAATCACCAGAGGCTCAACAGCTGAACAAAGACATAT
TTGAAACCATTTACTACCATGCTCTGAAAACTTCTTCGGAGATAGCTGCA
AAAGAAGGTCCTTATGAAACATATCATAATAGCCCTGTGAGCAAGGGAAT
TCTCCAACCCGACATGTGGAATGTAATTCCATCAGATCGATGGGACTGGG
GAGTACTTAGAGATATGATATCAAAGAATGGAGTGAGAAATTCACTTCTT
GTAGCACCAATGCCAACTGCCTCGACCAGCCAGATTCTCGGAAACAATGA
GTGCTTTGAGCCATATACTTTCTAACATCTACAGGTCGCAAAGTTCTAAG
TGGTGAATTTGTTGTAATGAACAAACATCTTCCTCACGACTTAACTGAAA
GGGGAATTTGGCCTCCCACTATTAAAAAAAAAAAATAAAACATGAAGGGT
TCGGTTCAAAAAATTCCCGAAATCCCTGAAGGAATAAAAAATGAATTAAA
AAAATGGTTTGGGAAAAACAAGCCAAAAGAAGCTGGGTTGAATTGGGTTG
GTTGAAAAAAAGGGGGCTTTATAAACCAAAAATCAAAACCCTTTAAAATT
CCACATTGGGATCACCCCAAATTTTAAAAAAAAGTGGATTTTCTTTTGTT
TTTTCCCGCAAATGGGGGCCAAGGGGGGAAATATGAAAAAAAAGAAAAAA
TGGAACAATATCCCACCGGGGGCCACCGTGGGGCGGGGCCGCCGACGGAA
ACCCCCAACCAAAAATTTTTTTTTAAGTGGAGAA
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