EY675035

Overview
NameEY675035
Unique NameEY675035
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length984
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_BUCAI (Ribonucleoside-diphosphate reductase subunit alpha OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=nrdA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 4.106e-13
Identity = 48/158 (30.38%), Postives = 76/158 (48.10%), Query Frame = 1
Query:   58 EVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD------RWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 513
            E++ +    L++I+D   YPV  A++S +  R +GIGV   A       + +    A  L    FE + Y+ L+ S E+A ++G    ++++    G L  D +     D        DW +LR  I K G+RNS L A MP+ ++SQI       EP
Sbjct:  480 ELSILSVRALDEILDYQNYPVLAAKKSAISRRSLGIGVINFAYYLAKNKVRYSDGSAHNLTHKTFEAMQYYLLEASCELAKEKGACSLFNHTNYYLGKLPIDTYKKYIDDICNEPLHLDWNLLRSKIKKYGLRNSTLSALMPSETSSQISNATNGIEP 637          
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_BUCAP (Ribonucleoside-diphosphate reductase subunit alpha OS=Buchnera aphidicola subsp. Schizaphis graminum GN=nrdA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.038e-12
Identity = 48/164 (29.27%), Postives = 76/164 (46.34%), Query Frame = 1
Query:   40 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGILQPDMWNVIPSD------RWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 513
            D   L E++ +    L++I++   YPV  A++S +  R +GIGV   A       + +    A+ L    FE I Y+ LK S E+A ++G    ++ +    G    D +              +W +LR  I K G+RNS L A MP+ ++SQI       EP
Sbjct:  474 DLHDLKELSTLSVRALDEILEYQNYPVVCAKKSAISRRSLGIGVINFAYYLAKNKVRYSDGSAKNLTHKTFEAIQYYLLKASCELAKEKGSCSLFNQTNYYLGKFPIDTYKKDIDSICNEPLHLNWNLLRKKIKKYGLRNSTLSALMPSETSSQISNATNGIEP 637          
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_SYNY3 (Ribonucleoside-diphosphate reductase subunit alpha OS=Synechocystis sp. (strain PCC 6803) GN=nrdA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.725e-11
Identity = 48/157 (30.57%), Postives = 79/157 (50.32%), Query Frame = 1
Query:   40 DFEKLAEVTAIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGPYETYHNSPVSKGIL---QPDMW---NVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILG 492
            D + +A V+ I    L+  I++   P   A+  N ++R IG+G  GLAD      + ++  E   +N+ +FE I Y   ++S E+A + G Y  +  S   KG+L   +P  W   N    +RW+   L + I  +G+RNS + A  P  S+S + G
Sbjct:  489 DLQDIAGVSQIAVRMLDNTIELTAPPFADAKSHNNKYRTIGVGAMGLADWLAKRRLNYD--ELADINR-LFEEIGYWCTQSSMELAKERGAYPAFPGSDWQKGLLIGSKPVSWFQANAAKPERWE--KLSNDIQTHGIRNSHITAIAPNTSSSLVQG 640          
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_EBVG (Ribonucleoside-diphosphate reductase large subunit OS=Epstein-Barr virus (strain GD1) GN=BORF2 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.725e-11
Identity = 43/123 (34.96%), Postives = 66/123 (53.66%), Query Frame = 1
Query:  157 IGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGP-YETYHNSPVSKGILQPDMW--NVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 516
            +G+GVQGLAD F  LG  +  P ++ LNK+IFE +Y+ AL TSS I       +  +  S  + G      W    +   R  W  L + I ++G+ NS  +A MPT+  +Q+ G ++ F P+
Sbjct:  489 MGLGVQGLADVFADLGWQYTDPPSRSLNKEIFEHMYFTALCTSSLIGLHTRKIFPGFKQSKYAGGWFHWHDWAGTDLSIPREIWSRLSERIVRDGLFNSQFIALMPTSGCAQVTGCSDAFYPF 611          
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_EBVB9 (Ribonucleoside-diphosphate reductase large subunit OS=Epstein-Barr virus (strain B95-8) GN=BORF2 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.725e-11
Identity = 43/123 (34.96%), Postives = 66/123 (53.66%), Query Frame = 1
Query:  157 IGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGP-YETYHNSPVSKGILQPDMW--NVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 516
            +G+GVQGLAD F  LG  +  P ++ LNK+IFE +Y+ AL TSS I       +  +  S  + G      W    +   R  W  L + I ++G+ NS  +A MPT+  +Q+ G ++ F P+
Sbjct:  489 MGLGVQGLADVFADLGWQYTDPPSRSLNKEIFEHMYFTALCTSSLIGLHTRKIFPGFKQSKYAGGWFHWHDWAGTDLSIPREIWSRLSERIVRDGLFNSQFIALMPTSGCAQVTGCSDAFYPF 611          
BLAST of EY675035 vs. ExPASy Swiss-Prot
Match: RIR1_EBVA8 (Ribonucleoside-diphosphate reductase large subunit OS=Epstein-Barr virus (strain AG876) GN=BORF2 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.725e-11
Identity = 43/123 (34.96%), Postives = 66/123 (53.66%), Query Frame = 1
Query:  157 IGIGVQGLADTFILLGMAFESPEAQQLNKDIFETIYYHALKTSSEIAAKEGP-YETYHNSPVSKGILQPDMW--NVIPSDRWDWGVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 516
            +G+GVQGLAD F  LG  +  P ++ LNK+IFE +Y+ AL TSS I       +  +  S  + G      W    +   R  W  L + I ++G+ NS  +A MPT+  +Q+ G ++ F P+
Sbjct:  489 MGLGVQGLADVFADLGWQYTDPPSRSLNKEIFEHMYFTALCTSSLIGLHTRKIFPGFKQSKYAGGWFHWHDWAGTDLSIPREIWSRLSERIVRDGLFNSQFIALMPTSGCAQVTGCSDAFYPF 611          
The following BLAST results are available for this feature:
BLAST of EY675035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
RIR1_BUCAI4.106e-1330.38Ribonucleoside-diphosphate reductase subunit alpha... [more]
RIR1_BUCAP2.038e-1229.27Ribonucleoside-diphosphate reductase subunit alpha... [more]
RIR1_SYNY31.725e-1130.57Ribonucleoside-diphosphate reductase subunit alpha... [more]
RIR1_EBVG1.725e-1134.96Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_EBVB91.725e-1134.96Ribonucleoside-diphosphate reductase large subunit... [more]
RIR1_EBVA81.725e-1134.96Ribonucleoside-diphosphate reductase large subunit... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-B03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675035 ID=EY675035; Name=EY675035; organism=Citrus sinensis; type=EST; length=984bp
AGGATTGTTGGGAGCCCAGGTTCTAAAAATAGATTTTTTGACTTTGAAAA
ATTAGCTGAGGTTACTGCAATTGTTACTGAAAACCTTAACAAAATAATTG
ATGTTAATTACTACCCTGTTGAAACTGCCAGAAGGTCAAATTTGCGACAT
AGACCCATCGGTATTGGAGTTCAGGGTCTAGCAGATACCTTCATCTTACT
TGGAATGGCATTTGAATCACCAGAGGCTCAACAGCTGAACAAAGACATAT
TTGAAACCATTTACTACCATGCTCTGAAAACTTCTTCGGAGATAGCTGCA
AAAGAAGGTCCTTATGAAACATATCATAATAGCCCTGTGAGCAAGGGAAT
TCTCCAACCCGACATGTGGAATGTAATTCCATCAGATCGATGGGACTGGG
GAGTACTTAGAGATATGATATCAAAGAATGGAGTGAGAAATTCACTTCTT
GTAGCACCAATGCCAACTGCCTCGACCAGCCAGATTCTCGGAAACAATGA
GTGCTTTGAGCCATATACTTTCTAACATCTACAGGTCGCAAAGTTCTAAG
TGGTGAATTTGTTGTAATGAACAAACATCTTCCTCACGACTTAACTGAAA
GGGGAATTTGGCCTCCCACTATTAAAAAAAAAAAATAAAACATGAAGGGT
TCGGTTCAAAAAATTCCCGAAATCCCTGAAGGAATAAAAAATGAATTAAA
AAAATGGTTTGGGAAAAACAAGCCAAAAGAAGCTGGGTTGAATTGGGTTG
GTTGAAAAAAAGGGGGCTTTATAAACCAAAAATCAAAACCCTTTAAAATT
CCACATTGGGATCACCCCAAATTTTAAAAAAAAGTGGATTTTCTTTTGTT
TTTTCCCGCAAATGGGGGCCAAGGGGGGAAATATGAAAAAAAAGAAAAAA
TGGAACAATATCCCACCGGGGGCCACCGTGGGGCGGGGCCGCCGACGGAA
ACCCCCAACCAAAAATTTTTTTTTAAGTGGAGAA
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